RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 BACH1O14867 736 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 LILRB5O75023 590 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 GHRP10912 638 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 HOXB8P17481 243 aaPredicted RBP12.59□□□□□ -0.39
CCDC47-206ENST00000584112 FOXC1Q12948 553 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 LPIN1Q14693 890 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 PLPP4Q5VZY2 271 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 ERICH6BQ5W0A0 696 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 CES5AQ6NT32 575 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 MIS18BP1Q6P0N0 1132 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 ABHD15Q6UXT9 468 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 TSHZ1Q6ZSZ6 1077 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 PLCD3Q8N3E9 789 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 C12orf76Q8N812 135 aaPredicted RBP12.59□□□□□ -0.39
CCDC47-206ENST00000584112 ZBTB44Q8NCP5 570 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 ZNF274Q96GC6 653 aaPredicted RBP12.59□□□□□ -0.39
CCDC47-206ENST00000584112 ZNF577Q9BSK1 485 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 KCNK12Q9HB15 430 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 NCOA5Q9HCD5 579 aaKnown RBP12.59□□□□□ -0.39
CCDC47-206ENST00000584112 ZNF302Q9NR11 478 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 SEMA4GQ9NTN9 838 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 CACNA2D2Q9NY47 1150 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 PCDHA2Q9Y5H9 948 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 CDY2AQ9Y6F7 541 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 SQORQ9Y6N5 450 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 DENND4AQ7Z401 1863 aa12.59□□□□□ -0.39
CCDC47-206ENST00000584112 SMIM35A0A1B0GVV1 85 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 EIF4E1BA6NMX2 242 aaKnown RBP12.58□□□□□ -0.4
CCDC47-206ENST00000584112 TM4SF5O14894 197 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 TBC1D4O60343 1298 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 HBP1O60381 514 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 DGKIO75912 1065 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 DEXIO95424 95 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 EOMESO95936 686 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 CCNE2O96020 404 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 CIITAP33076 1130 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 NLRP5P59047 1200 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 KRT76Q01546 638 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 SSRP1Q08945 709 aaKnown RBP12.58□□□□□ -0.4
CCDC47-206ENST00000584112 TOB2Q14106 344 aaPredicted RBP12.58□□□□□ -0.4
CCDC47-206ENST00000584112 FBXO47Q5MNV8 452 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 RARS2Q5T160 578 aaKnown RBP12.58□□□□□ -0.4
CCDC47-206ENST00000584112 ZNF746Q6NUN9 644 aaPredicted RBP12.58□□□□□ -0.4
CCDC47-206ENST00000584112 PDXDC2PQ6P474 469 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 TSSK4Q6SA08 328 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 SMAP1Q8IYB5 467 aaPredicted RBP12.58□□□□□ -0.4
CCDC47-206ENST00000584112 FAM177A1Q8N128 213 aaPredicted RBP12.58□□□□□ -0.4
CCDC47-206ENST00000584112 NME8Q8N427 588 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 RSAD2Q8WXG1 361 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 TEX15Q9BXT5 2789 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 C22orf23Q9BZE7 217 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 FAM49AQ9H0Q0 323 aaPredicted RBP12.58□□□□□ -0.4
CCDC47-206ENST00000584112 AAASQ9NRG9 546 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 SPATA6Q9NWH7 488 aaPredicted RBP12.58□□□□□ -0.4
CCDC47-206ENST00000584112 ZSCAN32Q9NX65 697 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 PPP4R2Q9NY27 417 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 VPS54Q9P1Q0 977 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 WNT16Q9UBV4 365 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 DBR1Q9UK59 544 aaKnown RBP12.58□□□□□ -0.4
CCDC47-206ENST00000584112 TRPV2Q9Y5S1 764 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 SDK1Q7Z5N4 2213 aa12.58□□□□□ -0.4
CCDC47-206ENST00000584112 LAMA1P25391 3075 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 ANKRD17O75179 2603 aaKnown RBP12.57□□□□□ -0.4
CCDC47-206ENST00000584112 DHX15O43143 795 aaKnown RBP12.57□□□□□ -0.4
CCDC47-206ENST00000584112 LAMTOR5O43504 91 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 PRB1P04280 392 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 PSAPP07602 524 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 MTHFRP42898 656 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 GATMP50440 423 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 USP11P51784 963 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 TPRNQ4KMQ1 711 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 PRR16Q569H4 304 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 ZNF484Q5JVG2 852 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 MTHFD1LQ6UB35 978 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 FAM43BQ6ZT52 329 aaPredicted RBP12.57□□□□□ -0.4
CCDC47-206ENST00000584112 CCDC60Q8IWA6 550 aaPredicted RBP12.57□□□□□ -0.4
CCDC47-206ENST00000584112 RASGRP4Q8TDF6 673 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 TRAPPC12Q8WVT3 735 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 FTHL17Q9BXU8 183 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 PDRG1Q9NUG6 133 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 WASF3Q9UPY6 502 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 KDM3AQ9Y4C1 1321 aa12.57□□□□□ -0.4
CCDC47-206ENST00000584112 ARID2Q68CP9 1835 aa12.56□□□□□ -0.4
CCDC47-206ENST00000584112 HIDE1A8MVS5 230 aa12.56□□□□□ -0.4
CCDC47-206ENST00000584112 FSCN2O14926 492 aa12.56□□□□□ -0.4
CCDC47-206ENST00000584112 KCNK5O95279 499 aa12.56□□□□□ -0.4
CCDC47-206ENST00000584112 GALNT17Q6IS24 598 aa12.56□□□□□ -0.4
CCDC47-206ENST00000584112 SWSAP1Q6NVH7 229 aa12.56□□□□□ -0.4
CCDC47-206ENST00000584112 CKAP2LQ8IYA6 745 aa12.56□□□□□ -0.4
CCDC47-206ENST00000584112 BBXQ8WY36 941 aaPredicted RBP12.56□□□□□ -0.4
CCDC47-206ENST00000584112 CELF4Q9BZC1 486 aaKnown RBP12.56□□□□□ -0.4
CCDC47-206ENST00000584112 FBXO4Q9UKT5 387 aa12.56□□□□□ -0.4
CCDC47-206ENST00000584112 PCDHA4Q9UN74 947 aa12.56□□□□□ -0.4
CCDC47-206ENST00000584112 CEP131Q9UPN4 1083 aa12.56□□□□□ -0.4
CCDC47-206ENST00000584112 SAMM50Q9Y512 469 aa12.56□□□□□ -0.4
CCDC47-206ENST00000584112 PCDHA10Q9Y5I2 948 aa12.56□□□□□ -0.4
CCDC47-206ENST00000584112 CFAP46Q8IYW2 2715 aa12.56□□□□□ -0.4
CCDC47-206ENST00000584112 IGSF9BQ9UPX0 1349 aa12.56□□□□□ -0.4
CCDC47-206ENST00000584112 FSD2A1L4K1 749 aa12.55□□□□□ -0.4
CCDC47-206ENST00000584112 WDR64B1ANS9 1081 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms