RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	POLD4	Q9HCU8	107 aa		11.02	□□□□□ -0.65
EIF4A1-231	ENST00000584054	PANK4	Q9NVE7	773 aa		11.02	□□□□□ -0.65
EIF4A1-231	ENST00000584054	TMEM63C	Q9P1W3	806 aa		11.02	□□□□□ -0.65
EIF4A1-231	ENST00000584054	TRPV2	Q9Y5S1	764 aa		11.02	□□□□□ -0.65
EIF4A1-231	ENST00000584054	CDY2A	Q9Y6F7	541 aa		11.02	□□□□□ -0.65
EIF4A1-231	ENST00000584054	PHLPP2	Q6ZVD8	1323 aa		11.02	□□□□□ -0.65
EIF4A1-231	ENST00000584054	SI	P14410	1827 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054		A0A087WZ62	844 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	TRAK2	O60296	914 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	NBN	O60934	754 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	RFC2	P35250	354 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	HOXD13	P35453	343 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	THPO	P40225	353 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	EFNA5	P52803	228 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	PEX3	P56589	373 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	MCCD1	P59942	119 aa	Predicted RBP	11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	CACNB1	Q02641	598 aa	Predicted RBP	11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	MBTD1	Q05BQ5	628 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	STK4	Q13043	487 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	ALCAM	Q13740	583 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	MORC3	Q14149	939 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	TFDP1	Q14186	410 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	LPIN1	Q14693	890 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	KMT5B	Q4FZB7	885 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	PLEKHG4	Q58EX7	1191 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	MFSD5	Q6N075	450 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	FOXR2	Q6PJQ5	311 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	LRRC8D	Q7L1W4	858 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	SFR1	Q86XK3	245 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	RHPN2	Q8IUC4	686 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	CCDC155	Q8N6L0	562 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	TRIML1	Q8N9V2	468 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	KIAA0895	Q8NCT3	520 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	HVCN1	Q96D96	273 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	PRIMPOL	Q96LW4	560 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	CCDC43	Q96MW1	224 aa	Known RBP	11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	FDXACB1	Q9BRP7	624 aa	Predicted RBP	11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	TRAIP	Q9BWF2	469 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	FGFBP2	Q9BYJ0	223 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	C2orf40	Q9H1Z8	148 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	HIPK3	Q9H422	1215 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	AGO3	Q9H9G7	860 aa	Known RBP	11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	PTPRH	Q9HD43	1115 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	ERVK-5	Q9HDB9	667 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	TMEM39A	Q9NV64	488 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	HOOK1	Q9UJC3	728 aa	Known RBP	11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	ATP11B	Q9Y2G3	1177 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054	UMODL1	Q5DID0	1318 aa		11.01	□□□□□ -0.65
EIF4A1-231	ENST00000584054		H0YCG3	227 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	ACKR2	O00590	384 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	ABLIM1	O14639	778 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	EIF3D	O15371	548 aa	Known RBP eCLIP	11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	FAM13A	O94988	1023 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	PROZ	P22891	400 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	HOXA11	P31270	313 aa	Predicted RBP	11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	CASP5	P51878	434 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	CHMP4BP1	P59074	171 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	ASIC1	P78348	528 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	DMP1	Q13316	513 aa	Predicted RBP	11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	DSC3	Q14574	896 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	KIZ	Q2M2Z5	673 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	HERC4	Q5GLZ8	1057 aa	Predicted RBP	11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	FAM26F	Q5R3K3	315 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	ODR4	Q5SWX8	454 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	MAEA	Q7L5Y9	396 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	HAUS6	Q7Z4H7	955 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	FAM228A	Q86W67	206 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	MAP4K3	Q8IVH8	894 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	CRIPAK	Q8N1N5	446 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	MYCT1	Q8N699	235 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	RNF149	Q8NC42	400 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	SCFD1	Q8WVM8	642 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	IFT74	Q96LB3	600 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	ANP32E	Q9BTT0	268 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	GCOM2	Q9BZD3	368 aa	Predicted RBP	11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	INO80B	Q9C086	356 aa	Predicted RBP	11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	NUP62CL	Q9H1M0	184 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	MAN1B1	Q9UKM7	699 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	NOD1	Q9Y239	953 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	AKT3	Q9Y243	479 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054	STYXL1	Q9Y6J8	313 aa		11	□□□□□ -0.65
EIF4A1-231	ENST00000584054		A0A1B0GUA9	196 aa		10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	TBCA	O75347	108 aa	Known RBP	10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	SMC2	O95347	1197 aa		10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	EDN1	P05305	212 aa		10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	SRGAP2C	P0DJJ0	459 aa		10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	NMT1	P30419	496 aa	Known RBP	10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	PHKA2	P46019	1235 aa		10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	PSEN1	P49768	467 aa		10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	SMTN	P53814	917 aa		10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	FAM189B	P81408	668 aa		10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	RAD51AP2	Q09MP3	1159 aa		10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	CCDC183	Q5T5S1	534 aa		10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	ZNF658	Q5TYW1	1059 aa	Predicted RBP	10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	ZPBP2	Q6X784	338 aa		10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	TSHZ1	Q6ZSZ6	1077 aa		10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	FAM178B	Q8IXR5	827 aa		10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	GUF1	Q8N442	669 aa	Known RBP	10.99	□□□□□ -0.65
EIF4A1-231	ENST00000584054	GLIS3	Q8NEA6	775 aa		10.99	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms