RNA–Protein interactions for RNA: ENST00000583708.5

UBBP4-201, Transcript of ubiquitin B pseudogene 4, humanhuman

BASIC

Gene UBBP4, Length 689 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-201ENST00000583708 KYAT1Q16773 422 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 KIZQ2M2Z5 673 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 NT5DC1Q5TFE4 455 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 CNKSR3Q6P9H4 555 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 ZPBP2Q6X784 338 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 ZNF720Q7Z2F6 126 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 TRIML1Q8N9V2 468 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 LRRC15Q8TF66 581 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 SH2D3AQ9BRG2 576 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 FDXACB1Q9BRP7 624 aaPredicted RBP10.27□□□□□ -0.77
UBBP4-201ENST00000583708 FZD8Q9H461 694 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 TMEM206Q9H813 350 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 C1orf112Q9NSG2 853 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 ARHGAP28Q9P2N2 729 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 EXOC7Q9UPT5 735 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 UBE4BO95155 1302 aa10.27□□□□□ -0.77
UBBP4-201ENST00000583708 CCDC169A6NNP5 214 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 KIAA0391O15091 583 aaKnown RBP10.26□□□□□ -0.77
UBBP4-201ENST00000583708 EIF3DO15371 548 aaKnown RBP eCLIP10.26□□□□□ -0.77
UBBP4-201ENST00000583708 RHOBTB3O94955 611 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 LETM1O95202 739 aaPredicted RBP10.26□□□□□ -0.77
UBBP4-201ENST00000583708 IDEP14735 1019 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 ZSCAN20P17040 1043 aaPredicted RBP10.26□□□□□ -0.77
UBBP4-201ENST00000583708 AFMP43652 599 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 POU5F1Q01860 360 aaKnown RBP10.26□□□□□ -0.77
UBBP4-201ENST00000583708 EHHADHQ08426 723 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 PAK2Q13177 524 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 DRP2Q13474 957 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 LPIN1Q14693 890 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 COBLL1Q53SF7 1204 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 CT47A1Q5JQC4 288 aaPredicted RBP10.26□□□□□ -0.77
UBBP4-201ENST00000583708 SLFN12LQ6IEE8 588 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 MAEAQ7L5Y9 396 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 DYMQ7RTS9 669 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 HAUS6Q7Z4H7 955 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 TMEM161BQ8NDZ6 487 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 GOLGA5Q8TBA6 731 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 ASAP3Q8TDY4 903 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 WNT8BQ93098 351 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 SMARCE1Q969G3 411 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 NLRP4Q96MN2 994 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 IFIH1Q9BYX4 1025 aaKnown RBP10.26□□□□□ -0.77
UBBP4-201ENST00000583708 PPP1R12CQ9BZL4 782 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 WNT8AQ9H1J5 351 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 MRPL44Q9H9J2 332 aaKnown RBP10.26□□□□□ -0.77
UBBP4-201ENST00000583708 GPRC5CQ9NQ84 441 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 EXOC1Q9NV70 894 aa10.26□□□□□ -0.77
UBBP4-201ENST00000583708 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.26□□□□□ -0.77
UBBP4-201ENST00000583708 TRIP12Q14669 1992 aaPredicted RBP10.25□□□□□ -0.77
UBBP4-201ENST00000583708 CARNS1A5YM72 827 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 INO80B-WBP1J3KQ70 363 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 N4BP3O15049 544 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 ZNF623O75123 536 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 ERLIN2O94905 339 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 EOMESO95936 686 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 PIGRP01833 764 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 FGBP02675 491 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 RPN1P04843 607 aaKnown RBP10.25□□□□□ -0.77
UBBP4-201ENST00000583708 SARSP49591 514 aaKnown RBP10.25□□□□□ -0.77
UBBP4-201ENST00000583708 RAB27AP51159 221 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 CCL23P55773 120 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 MBTD1Q05BQ5 628 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 CUL4BQ13620 913 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 FAM26FQ5R3K3 315 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 NOTUMQ6P988 496 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 FOXR2Q6PJQ5 311 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 CATSPER4Q7RTX7 472 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 HACE1Q8IYU2 909 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 PHOSPHO2Q8TCD6 241 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 ZNF507Q8TCN5 953 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 PPP1R13LQ8WUF5 828 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 TMEM174Q8WUU8 243 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 ACCSQ96QU6 501 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 OSMRQ99650 979 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 STRA6Q9BX79 667 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 MRPL4Q9BYD3 311 aaKnown RBP10.25□□□□□ -0.77
UBBP4-201ENST00000583708 CCDC113Q9H0I3 377 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 CLSTN2Q9H4D0 955 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 ZHX3Q9H4I2 956 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 ELAC1Q9H777 363 aaKnown RBP10.25□□□□□ -0.77
UBBP4-201ENST00000583708 ERVK-5Q9HDB9 667 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 AGPAT5Q9NUQ2 364 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 KIAA1468Q9P260 1216 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 PADI3Q9ULW8 664 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 ST3GAL5Q9UNP4 418 aa10.25□□□□□ -0.77
UBBP4-201ENST00000583708 NOC2LQ9Y3T9 749 aaKnown RBP10.25□□□□□ -0.77
UBBP4-201ENST00000583708 A0A1B0GUA9 196 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 A0A1W2PPC1 479 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 DENND3A2RUS2 1198 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 SFI1A8K8P3 1242 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 KLRC4O43908 158 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 NBNO60934 754 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 PPP1R37O75864 691 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 CTSHP09668 335 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 GHRP10912 638 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 FAM189BP81408 668 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 TMEM62Q0P6H9 643 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 COASYQ13057 564 aa10.24□□□□□ -0.77
UBBP4-201ENST00000583708 PRPF4BQ13523 1007 aaKnown RBP10.24□□□□□ -0.77
UBBP4-201ENST00000583708 MYBPC2Q14324 1141 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms