RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 TMEM143Q96AN5 459 aa27.67■■■□□ 2.02
CDC42EP4-205ENST00000580315 NLRP4Q96MN2 994 aa27.67■■■□□ 2.02
CDC42EP4-205ENST00000580315 NACC1Q96RE7 527 aa27.67■■■□□ 2.02
CDC42EP4-205ENST00000580315 FDXACB1Q9BRP7 624 aaPredicted RBP27.67■■■□□ 2.02
CDC42EP4-205ENST00000580315 EIF4ENIF1Q9NRA8 985 aaKnown RBP27.67■■■□□ 2.02
CDC42EP4-205ENST00000580315 BMP2KQ9NSY1 1161 aaPredicted RBP27.67■■■□□ 2.02
CDC42EP4-205ENST00000580315 LRWD1Q9UFC0 647 aa27.67■■■□□ 2.02
CDC42EP4-205ENST00000580315 K7ELQ4 463 aaPredicted RBP27.66■■■□□ 2.02
CDC42EP4-205ENST00000580315 DGAT1O75907 488 aa27.66■■■□□ 2.02
CDC42EP4-205ENST00000580315 SPATA31C1P0DKV0 1188 aa27.66■■■□□ 2.02
CDC42EP4-205ENST00000580315 RPA1P27694 616 aa27.66■■■□□ 2.02
CDC42EP4-205ENST00000580315 PDIA5Q14554 519 aa27.66■■■□□ 2.02
CDC42EP4-205ENST00000580315 PIGOQ8TEQ8 1089 aa27.66■■■□□ 2.02
CDC42EP4-205ENST00000580315 PRPF31Q8WWY3 499 aaKnown RBP27.66■■■□□ 2.02
CDC42EP4-205ENST00000580315 PPP2R3CQ969Q6 453 aa27.66■■■□□ 2.02
CDC42EP4-205ENST00000580315 ATP6V0A4Q9HBG4 840 aa27.66■■■□□ 2.02
CDC42EP4-205ENST00000580315 ASAP2O43150 1006 aa27.65■■■□□ 2.02
CDC42EP4-205ENST00000580315 MED24O75448 989 aa27.65■■■□□ 2.02
CDC42EP4-205ENST00000580315 MUTP22033 750 aa27.65■■■□□ 2.02
CDC42EP4-205ENST00000580315 PRPHP41219 470 aa27.65■■■□□ 2.02
CDC42EP4-205ENST00000580315 NDUFV1P49821 464 aa27.65■■■□□ 2.02
CDC42EP4-205ENST00000580315 GATMP50440 423 aa27.65■■■□□ 2.02
CDC42EP4-205ENST00000580315 DSC3Q14574 896 aa27.65■■■□□ 2.02
CDC42EP4-205ENST00000580315 ADGRD2Q7Z7M1 963 aa27.65■■■□□ 2.02
CDC42EP4-205ENST00000580315 KSR1Q8IVT5 923 aa27.65■■■□□ 2.02
CDC42EP4-205ENST00000580315 INTS4Q96HW7 963 aaKnown RBP27.65■■■□□ 2.02
CDC42EP4-205ENST00000580315 MSLNLQ96KJ4 702 aa27.65■■■□□ 2.02
CDC42EP4-205ENST00000580315 C9IYK1 514 aa27.64■■■□□ 2.02
CDC42EP4-205ENST00000580315 RARRES1P49788 294 aa27.64■■■□□ 2.02
CDC42EP4-205ENST00000580315 LAMTOR4Q0VGL1 99 aa27.64■■■□□ 2.02
CDC42EP4-205ENST00000580315 DTHD1Q6ZMT9 781 aa27.64■■■□□ 2.02
CDC42EP4-205ENST00000580315 BRAPQ7Z569 592 aa27.64■■■□□ 2.02
CDC42EP4-205ENST00000580315 EFHBQ8N7U6 833 aa27.64■■■□□ 2.02
CDC42EP4-205ENST00000580315 POF1BQ8WVV4 589 aa27.64■■■□□ 2.02
CDC42EP4-205ENST00000580315 MUTYHQ9UIF7 546 aa27.64■■■□□ 2.02
CDC42EP4-205ENST00000580315 DBR1Q9UK59 544 aaKnown RBP27.64■■■□□ 2.02
CDC42EP4-205ENST00000580315 WDFY4Q6ZS81 3184 aa27.64■■■□□ 2.01
CDC42EP4-205ENST00000580315 VPS37CA5D8V6 355 aaPredicted RBP27.63■■■□□ 2.01
CDC42EP4-205ENST00000580315 CSDE1O75534 798 aaKnown RBP27.63■■■□□ 2.01
CDC42EP4-205ENST00000580315 EYA4O95677 639 aa27.63■■■□□ 2.01
CDC42EP4-205ENST00000580315 FGFR4P22455 802 aa27.63■■■□□ 2.01
CDC42EP4-205ENST00000580315 CCT6AP40227 531 aaKnown RBP27.63■■■□□ 2.01
CDC42EP4-205ENST00000580315 MXD4Q14582 209 aaPredicted RBP27.63■■■□□ 2.01
CDC42EP4-205ENST00000580315 HERC4Q5GLZ8 1057 aaPredicted RBP27.63■■■□□ 2.01
CDC42EP4-205ENST00000580315 RNF135Q8IUD6 432 aa27.63■■■□□ 2.01
CDC42EP4-205ENST00000580315 ELAC1Q9H777 363 aaKnown RBP27.63■■■□□ 2.01
CDC42EP4-205ENST00000580315 CHST12Q9NRB3 414 aa27.63■■■□□ 2.01
CDC42EP4-205ENST00000580315 TMEM161AQ9NX61 479 aa27.63■■■□□ 2.01
CDC42EP4-205ENST00000580315 DACT1Q9NYF0 836 aa27.63■■■□□ 2.01
CDC42EP4-205ENST00000580315 CLEC1BQ9P126 229 aa27.63■■■□□ 2.01
CDC42EP4-205ENST00000580315 SRGAP2CP0DJJ0 459 aa27.62■■■□□ 2.01
CDC42EP4-205ENST00000580315 FAM189BP81408 668 aa27.62■■■□□ 2.01
CDC42EP4-205ENST00000580315 POTEGQ6S5H5 508 aa27.62■■■□□ 2.01
CDC42EP4-205ENST00000580315 HFE2Q6ZVN8 426 aa27.62■■■□□ 2.01
CDC42EP4-205ENST00000580315 CATSPER4Q7RTX7 472 aa27.62■■■□□ 2.01
CDC42EP4-205ENST00000580315 FERMT3Q86UX7 667 aa27.62■■■□□ 2.01
CDC42EP4-205ENST00000580315 ALYREFQ86V81 257 aaKnown RBP27.62■■■□□ 2.01
CDC42EP4-205ENST00000580315 IGSF22Q8N9C0 903 aa27.62■■■□□ 2.01
CDC42EP4-205ENST00000580315 XPNPEP1Q9NQW7 623 aa27.62■■■□□ 2.01
CDC42EP4-205ENST00000580315 A0A087WWV3 80 aa27.61■■■□□ 2.01
CDC42EP4-205ENST00000580315 NRIP1P48552 1158 aa27.61■■■□□ 2.01
CDC42EP4-205ENST00000580315 ATP2C1P98194 919 aaPredicted RBP27.61■■■□□ 2.01
CDC42EP4-205ENST00000580315 TFDP1Q14186 410 aa27.61■■■□□ 2.01
CDC42EP4-205ENST00000580315 SRGAP1Q7Z6B7 1085 aa27.61■■■□□ 2.01
CDC42EP4-205ENST00000580315 SNX21Q969T3 373 aa27.61■■■□□ 2.01
CDC42EP4-205ENST00000580315 IFT122Q9HBG6 1241 aa27.61■■■□□ 2.01
CDC42EP4-205ENST00000580315 HOXA2O43364 376 aa27.6■■■□□ 2.01
CDC42EP4-205ENST00000580315 USO1O60763 962 aaKnown RBP27.6■■■□□ 2.01
CDC42EP4-205ENST00000580315 PHKA2P46019 1235 aa27.6■■■□□ 2.01
CDC42EP4-205ENST00000580315 KRT79Q5XKE5 535 aa27.6■■■□□ 2.01
CDC42EP4-205ENST00000580315 RBM23Q86U06 439 aaKnown RBP27.6■■■□□ 2.01
CDC42EP4-205ENST00000580315 RNF149Q8NC42 400 aa27.6■■■□□ 2.01
CDC42EP4-205ENST00000580315 SMRP1Q8NCR6 262 aa27.6■■■□□ 2.01
CDC42EP4-205ENST00000580315 SNX29Q8TEQ0 813 aa27.6■■■□□ 2.01
CDC42EP4-205ENST00000580315 FBXL18Q96ME1 805 aa27.6■■■□□ 2.01
CDC42EP4-205ENST00000580315 KCNH6Q9H252 994 aa27.6■■■□□ 2.01
CDC42EP4-205ENST00000580315 PCDHGC5Q9Y5F6 944 aa27.6■■■□□ 2.01
CDC42EP4-205ENST00000580315 LOXHD1Q8IVV2 1947 aa27.59■■■□□ 2.01
CDC42EP4-205ENST00000580315 ARHGEF35A5YM69 484 aa27.59■■■□□ 2.01
CDC42EP4-205ENST00000580315 COASYQ13057 564 aa27.59■■■□□ 2.01
CDC42EP4-205ENST00000580315 MCPH1Q8NEM0 835 aa27.59■■■□□ 2.01
CDC42EP4-205ENST00000580315 PIN4Q9Y237 131 aaKnown RBP27.59■■■□□ 2.01
CDC42EP4-205ENST00000580315 KIAA1671Q9BY89 1806 aa27.59■■■□□ 2.01
CDC42EP4-205ENST00000580315 GLP2RO95838 553 aa27.58■■■□□ 2.01
CDC42EP4-205ENST00000580315 ARL6IP4Q66PJ3 421 aaKnown RBP27.58■■■□□ 2.01
CDC42EP4-205ENST00000580315 HSCBQ8IWL3 235 aa27.58■■■□□ 2.01
CDC42EP4-205ENST00000580315 PCDHB12Q9Y5F1 795 aa27.58■■■□□ 2.01
CDC42EP4-205ENST00000580315 A0A0U1RQF3 1178 aa27.57■■■□□ 2
CDC42EP4-205ENST00000580315 TBKBP1A7MCY6 615 aa27.57■■■□□ 2
CDC42EP4-205ENST00000580315 BMP15O95972 392 aa27.57■■■□□ 2
CDC42EP4-205ENST00000580315 ARL2P36404 184 aa27.57■■■□□ 2
CDC42EP4-205ENST00000580315 NHLH1Q02575 133 aa27.57■■■□□ 2
CDC42EP4-205ENST00000580315 POU5F1BQ06416 359 aa27.57■■■□□ 2
CDC42EP4-205ENST00000580315 PCBP1Q15365 356 aaKnown RBP eCLIP27.57■■■□□ 2
CDC42EP4-205ENST00000580315 FAM102BQ5T8I3 360 aa27.57■■■□□ 2
CDC42EP4-205ENST00000580315 TWF2Q6IBS0 349 aaKnown RBP27.57■■■□□ 2
CDC42EP4-205ENST00000580315 ECHDC2Q86YB7 292 aa27.57■■■□□ 2
CDC42EP4-205ENST00000580315 POLR3FQ9H1D9 316 aaPredicted RBP27.57■■■□□ 2
CDC42EP4-205ENST00000580315 FOXD4L1Q9NU39 408 aa27.57■■■□□ 2
CDC42EP4-205ENST00000580315 BARX2Q9UMQ3 279 aaPredicted RBP27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms