RNA–Protein interactions for RNA: ENST00000576346.5

NSF-208, Transcript of N-ethylmaleimide sensitive factor, vesicle fusing ATPase, human

TSL 4

Gene NSF, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSF-208	ENST00000576346	SAMSN1	Q9NSI8	373 aa	Known RBP	4.17	□□□□□ -1.74
NSF-208	ENST00000576346	BARHL2	Q9NY43	387 aa		4.17	□□□□□ -1.74
NSF-208	ENST00000576346	ZKSCAN7	Q9P0L1	754 aa	Predicted RBP	4.17	□□□□□ -1.74
NSF-208	ENST00000576346	RNF14	Q9UBS8	474 aa		4.17	□□□□□ -1.74
NSF-208	ENST00000576346	ABCF2	Q9UG63	623 aa		4.17	□□□□□ -1.74
NSF-208	ENST00000576346	SEC63	Q9UGP8	760 aa	Known RBP	4.17	□□□□□ -1.74
NSF-208	ENST00000576346	MYO6	Q9UM54	1294 aa		4.17	□□□□□ -1.74
NSF-208	ENST00000576346	CAPN11	Q9UMQ6	739 aa		4.17	□□□□□ -1.74
NSF-208	ENST00000576346	SPATA31A1	Q5TZJ5	1347 aa		4.17	□□□□□ -1.74
NSF-208	ENST00000576346	MYO3B	Q8WXR4	1341 aa		4.17	□□□□□ -1.74
NSF-208	ENST00000576346	KDM3A	Q9Y4C1	1321 aa		4.17	□□□□□ -1.74
NSF-208	ENST00000576346	NHS	Q6T4R5	1651 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	THSD7A	Q9UPZ6	1657 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	UNC79	Q9P2D8	2635 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	CEP290	O15078	2479 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346		A0A087X0B3	334 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	PVALEF	A0A1B0GWK0	134 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	UNCX	A6NJT0	531 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	SOX1	O00570	391 aa	Predicted RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	SCAMP3	O14828	347 aa	Known RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	TM4SF5	O14894	197 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	NPHP1	O15259	732 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	TEX33	O43247	280 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	PAX4	O43316	350 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	TACC1	O75410	805 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	PLEKHA8P1	O95397	391 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	GNA14	O95837	355 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	PARP1	P09874	1014 aa	Known RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	OR52Z1	P0C646	297 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	TSPY3	P0CV98	308 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	TSPY8	P0CW00	308 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	HSPA8	P11142	646 aa	Known RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	TCP1	P17987	556 aa	Known RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	TRIM21	P19474	475 aa	Known RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	ATP2B1	P20020	1258 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	CCNE1	P24864	410 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	ANXA13	P27216	316 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	HIBADH	P31937	336 aa	Known RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	HNRNPH3	P31942	346 aa	Known RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	MCM7	P33993	719 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	CD68	P34810	354 aa	Predicted RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	CCT6A	P40227	531 aa	Known RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	TXK	P42681	527 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	ZNF157	P51786	506 aa	Predicted RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	GRIN1	Q05586	938 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	KIF5A	Q12840	1032 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	AP3B2	Q13367	1082 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	PWP1	Q13610	501 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	NONO	Q15233	471 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	ZNF174	Q15697	407 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	NPY5R	Q15761	445 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	ZSCAN26	Q16670	478 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	GLE1	Q53GS7	698 aa	Known RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	BEND6	Q5SZJ8	279 aa	Predicted RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	CCDC122	Q5T0U0	273 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	SOGA3	Q5TF21	947 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	PAPD7	Q5XG87	772 aa	Known RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	MCTP2	Q6DN12	878 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	C15orf52	Q6ZUT6	534 aa	Known RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	HS2ST1	Q7LGA3	356 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	ZNF572	Q7Z3I7	529 aa	Predicted RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	ZNF804A	Q7Z570	1209 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	RELL1	Q8IUW5	271 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	GRAMD1C	Q8IYS0	662 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	SLC35F6	Q8N357	371 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	SRBD1	Q8N5C6	995 aa	Known RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	CSGALNACT2	Q8N6G5	542 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	MB21D1	Q8N884	522 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	GIMAP8	Q8ND71	665 aa	Predicted RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	C3orf58	Q8NDZ4	430 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	CAGE1	Q8TC20	777 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	4.16	□□□□□ -1.74	3e-6	■■■■■ 50.8
NSF-208	ENST00000576346	P2RX5	Q93086	422 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	JAKMIP2	Q96AA8	810 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	EPSTI1	Q96J88	318 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	ERGIC2	Q96RQ1	377 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	C7orf25	Q9BPX7	421 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	CRACR2A	Q9BSW2	395 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	DESI2	Q9BSY9	194 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	MRPL18	Q9H0U6	180 aa	Known RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	SOX17	Q9H6I2	414 aa	Predicted RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	MKNK2	Q9HBH9	465 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	C6orf50	Q9HD87	102 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	RIC8A	Q9NPQ8	531 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	METTL5	Q9NRN9	209 aa	Known RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	PCMTD2	Q9NV79	361 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	KBTBD4	Q9NVX7	518 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	TAB2	Q9NYJ8	693 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	LEMD3	Q9Y2U8	911 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	JRKL	Q9Y4A0	524 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	DAAM1	Q9Y4D1	1078 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	SAR1B	Q9Y6B6	198 aa		4.16	□□□□□ -1.74
NSF-208	ENST00000576346	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.16	□□□□□ -1.74
NSF-208	ENST00000576346	MYH8	P13535	1937 aa		4.15	□□□□□ -1.74
NSF-208	ENST00000576346	MYH14	Q7Z406	1995 aa	Known RBP	4.15	□□□□□ -1.74
NSF-208	ENST00000576346	SSU72P8	A0A1W2PR75	194 aa		4.15	□□□□□ -1.75
NSF-208	ENST00000576346	STXBP3	O00186	592 aa		4.15	□□□□□ -1.75
NSF-208	ENST00000576346	TULP2	O00295	520 aa		4.15	□□□□□ -1.75
NSF-208	ENST00000576346	POLR3G	O15318	223 aa	Predicted RBP	4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms