RNA–Protein interactions for RNA: ENST00000569899.5

GDE1-205, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 4

Gene GDE1, Length 1,618 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-205ENST00000569899 FAM187AA6NFU0 413 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 SFI1A8K8P3 1242 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 AP5Z1O43299 807 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 FAM13AO94988 1023 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 ERCC5P28715 1186 aaPredicted RBP11.06□□□□□ -0.64
GDE1-205ENST00000569899 STAT5BP51692 787 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 LAMC2Q13753 1193 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 LRRC41Q15345 812 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 MTERF2Q49AM1 385 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 XKR3Q5GH77 459 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 HERC4Q5GLZ8 1057 aaPredicted RBP11.06□□□□□ -0.64
GDE1-205ENST00000569899 DEPDC4Q8N2C3 294 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 OR6J1Q8NGC5 347 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 NELFBQ8WX92 580 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 CEP170P1Q96L14 293 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 HSD3B7Q9H2F3 369 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 AZI2Q9H6S1 392 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 ODF2LQ9ULJ1 636 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 PCDHA2Q9Y5H9 948 aa11.06□□□□□ -0.64
GDE1-205ENST00000569899 PCNTO95613 3336 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 GPR25O00155 361 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 NRG2O14511 850 aaPredicted RBP11.05□□□□□ -0.64
GDE1-205ENST00000569899 PSMA7O14818 248 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 LGALS2P05162 132 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 ZNF286BP0CG31 522 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 XRCC5P13010 732 aaKnown RBP11.05□□□□□ -0.64
GDE1-205ENST00000569899 GAP43P17677 238 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 CASP5P51878 434 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 ZNF131P52739 623 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 PMS1P54277 932 aaKnown RBP11.05□□□□□ -0.64
GDE1-205ENST00000569899 TNFAIP2Q03169 654 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 PSMD2Q13200 908 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 STIM1Q13586 685 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 MAP7D1Q3KQU3 841 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 COBLL1Q53SF7 1204 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 IQSEC1Q6DN90 963 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 OTUD6AQ7L8S5 288 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 TRPV1Q8NER1 839 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 PPTC7Q8NI37 304 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 ENOX1Q8TC92 643 aaKnown RBP11.05□□□□□ -0.64
GDE1-205ENST00000569899 GLG1Q92896 1179 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 KLF16Q9BXK1 252 aaPredicted RBP11.05□□□□□ -0.64
GDE1-205ENST00000569899 PARVGQ9HBI0 331 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 GPRC5CQ9NQ84 441 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 CYP26B1Q9NR63 512 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 NFE2L3Q9Y4A8 694 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 COL4A3BPQ9Y5P4 624 aa11.05□□□□□ -0.64
GDE1-205ENST00000569899 SMTNL1A8MU46 457 aa11.04□□□□□ -0.64
GDE1-205ENST00000569899 NKRFO15226 690 aaKnown RBP eCLIP11.04□□□□□ -0.64
GDE1-205ENST00000569899 MMP3P08254 477 aa11.04□□□□□ -0.64
GDE1-205ENST00000569899 MYBP10242 640 aa11.04□□□□□ -0.64
GDE1-205ENST00000569899 CYBAP13498 195 aa11.04□□□□□ -0.64
GDE1-205ENST00000569899 SOX10P56693 466 aa11.04□□□□□ -0.64
GDE1-205ENST00000569899 HSP90AA4PQ58FG1 418 aa11.04□□□□□ -0.64
GDE1-205ENST00000569899 CT47A1Q5JQC4 288 aaPredicted RBP11.04□□□□□ -0.64
GDE1-205ENST00000569899 TLK2Q86UE8 772 aa11.04□□□□□ -0.64
GDE1-205ENST00000569899 GUF1Q8N442 669 aaKnown RBP11.04□□□□□ -0.64
GDE1-205ENST00000569899 MYCT1Q8N699 235 aa11.04□□□□□ -0.64
GDE1-205ENST00000569899 FAM167AQ96KS9 214 aa11.04□□□□□ -0.64
GDE1-205ENST00000569899 CEP89Q96ST8 783 aa11.04□□□□□ -0.64
GDE1-205ENST00000569899 GTPBP4Q9BZE4 634 aaKnown RBP11.04□□□□□ -0.64
GDE1-205ENST00000569899 XPNPEP1Q9NQW7 623 aa11.04□□□□□ -0.64
GDE1-205ENST00000569899 RWDD2AQ9UIY3 292 aa11.04□□□□□ -0.64
GDE1-205ENST00000569899 GNEQ9Y223 722 aaKnown RBP11.04□□□□□ -0.64
GDE1-205ENST00000569899 ATP1A3P13637 1013 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 ELNP15502 786 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 NMT1P30419 496 aaKnown RBP11.03□□□□□ -0.64
GDE1-205ENST00000569899 EMC2Q15006 297 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 PLCB4Q15147 1175 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 OXLD1Q5BKU9 147 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 FAM102BQ5T8I3 360 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 TTI2Q6NXR4 508 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 PLPPR4Q7Z2D5 763 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 NELFCDQ8IXH7 590 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 MYOCDQ8IZQ8 938 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 SCFD1Q8WVM8 642 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 P2RX5Q93086 422 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 DHTKD1Q96HY7 919 aaPredicted RBP11.03□□□□□ -0.64
GDE1-205ENST00000569899 FIZ1Q96SL8 496 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 SMARCAD1Q9H4L7 1026 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 MRPL44Q9H9J2 332 aaKnown RBP11.03□□□□□ -0.64
GDE1-205ENST00000569899 ATP6V0A4Q9HBG4 840 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 OLFML3Q9NRN5 406 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 FANCLQ9NW38 375 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 SAGE1Q9NXZ1 904 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 SRRDQ9UH36 339 aa11.03□□□□□ -0.64
GDE1-205ENST00000569899 DYNC1LI2O43237 492 aaPredicted RBP11.02□□□□□ -0.64
GDE1-205ENST00000569899 DGAT1O75907 488 aa11.02□□□□□ -0.64
GDE1-205ENST00000569899 GCNT3O95395 438 aa11.02□□□□□ -0.64
GDE1-205ENST00000569899 HOXD8P13378 290 aaPredicted RBP11.02□□□□□ -0.64
GDE1-205ENST00000569899 HSPA6P17066 643 aa11.02□□□□□ -0.64
GDE1-205ENST00000569899 CCNE1P24864 410 aa11.02□□□□□ -0.64
GDE1-205ENST00000569899 PPP1R2P41236 205 aa11.02□□□□□ -0.64
GDE1-205ENST00000569899 SCTRP47872 440 aa11.02□□□□□ -0.64
GDE1-205ENST00000569899 POLGP54098 1239 aaPredicted RBP11.02□□□□□ -0.64
GDE1-205ENST00000569899 TPM4P67936 248 aa11.02□□□□□ -0.64
GDE1-205ENST00000569899 NCOA4Q13772 614 aa11.02□□□□□ -0.64
GDE1-205ENST00000569899 TARBP2Q15633 366 aaKnown RBP11.02□□□□□ -0.64
GDE1-205ENST00000569899 ODR4Q5SWX8 454 aa11.02□□□□□ -0.64
GDE1-205ENST00000569899 SPATA1Q5VX52 437 aa11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms