RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 COBLL1Q53SF7 1204 aa25.85■■□□□ 1.73
RAB40C-212ENST00000569575 ZNF618Q5T7W0 954 aa25.85■■□□□ 1.73
RAB40C-212ENST00000569575 HAUS6Q7Z4H7 955 aa25.85■■□□□ 1.73
RAB40C-212ENST00000569575 BSNDQ8WZ55 320 aa25.85■■□□□ 1.73
RAB40C-212ENST00000569575 WNT8BQ93098 351 aa25.85■■□□□ 1.73
RAB40C-212ENST00000569575 FDXACB1Q9BRP7 624 aaPredicted RBP25.85■■□□□ 1.73
RAB40C-212ENST00000569575 UBE4BO95155 1302 aa25.85■■□□□ 1.73
RAB40C-212ENST00000569575 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP25.84■■□□□ 1.73
RAB40C-212ENST00000569575 GPR182O15218 404 aa25.84■■□□□ 1.73
RAB40C-212ENST00000569575 IQCF3P0C7M6 154 aa25.84■■□□□ 1.73
RAB40C-212ENST00000569575 SFPQP23246 707 aaKnown RBP eCLIP25.84■■□□□ 1.73
RAB40C-212ENST00000569575 MAPK6Q16659 721 aa25.84■■□□□ 1.73
RAB40C-212ENST00000569575 KIZQ2M2Z5 673 aa25.84■■□□□ 1.73
RAB40C-212ENST00000569575 ZNF658Q5TYW1 1059 aaPredicted RBP25.84■■□□□ 1.73
RAB40C-212ENST00000569575 TMEM161BQ8NDZ6 487 aa25.84■■□□□ 1.73
RAB40C-212ENST00000569575 FIZ1Q96SL8 496 aa25.84■■□□□ 1.73
RAB40C-212ENST00000569575 PRMT7Q9NVM4 692 aaPredicted RBP25.84■■□□□ 1.73
RAB40C-212ENST00000569575 EXOC7Q9UPT5 735 aa25.84■■□□□ 1.73
RAB40C-212ENST00000569575 CASP1P29466 404 aa25.83■■□□□ 1.73
RAB40C-212ENST00000569575 AXLP30530 894 aa25.83■■□□□ 1.73
RAB40C-212ENST00000569575 PPP4R3CPQ6ZMV5 832 aa25.83■■□□□ 1.73
RAB40C-212ENST00000569575 KSR1Q8IVT5 923 aa25.83■■□□□ 1.73
RAB40C-212ENST00000569575 STRA6Q9BX79 667 aa25.83■■□□□ 1.73
RAB40C-212ENST00000569575 FZD8Q9H461 694 aa25.83■■□□□ 1.73
RAB40C-212ENST00000569575 TMEM206Q9H813 350 aa25.83■■□□□ 1.73
RAB40C-212ENST00000569575 NR2E3Q9Y5X4 410 aa25.83■■□□□ 1.73
RAB40C-212ENST00000569575 K7ENM7 598 aa25.82■■□□□ 1.72
RAB40C-212ENST00000569575 PFKMP08237 780 aa25.82■■□□□ 1.72
RAB40C-212ENST00000569575 RAG1P15918 1043 aa25.82■■□□□ 1.72
RAB40C-212ENST00000569575 SNRPFP62306 86 aaKnown RBP25.82■■□□□ 1.72
RAB40C-212ENST00000569575 STRN3Q13033 797 aa25.82■■□□□ 1.72
RAB40C-212ENST00000569575 CT47A1Q5JQC4 288 aaPredicted RBP25.82■■□□□ 1.72
RAB40C-212ENST00000569575 FBXO47Q5MNV8 452 aa25.82■■□□□ 1.72
RAB40C-212ENST00000569575 CAVIN1Q6NZI2 390 aaKnown RBP25.82■■□□□ 1.72
RAB40C-212ENST00000569575 TRAF7Q6Q0C0 670 aa25.82■■□□□ 1.72
RAB40C-212ENST00000569575 TMEM199Q8N511 208 aa25.82■■□□□ 1.72
RAB40C-212ENST00000569575 TMEM63CQ9P1W3 806 aa25.82■■□□□ 1.72
RAB40C-212ENST00000569575 SLC16A4O15374 487 aa25.81■■□□□ 1.72
RAB40C-212ENST00000569575 PPP1R37O75864 691 aa25.81■■□□□ 1.72
RAB40C-212ENST00000569575 RGS19P49795 217 aa25.81■■□□□ 1.72
RAB40C-212ENST00000569575 TMEM62Q0P6H9 643 aa25.81■■□□□ 1.72
RAB40C-212ENST00000569575 MORC3Q14149 939 aa25.81■■□□□ 1.72
RAB40C-212ENST00000569575 MFSD5Q6N075 450 aa25.81■■□□□ 1.72
RAB40C-212ENST00000569575 TSHZ1Q6ZSZ6 1077 aa25.81■■□□□ 1.72
RAB40C-212ENST00000569575 ZNF507Q8TCN5 953 aa25.81■■□□□ 1.72
RAB40C-212ENST00000569575 APBB2Q92870 758 aa25.81■■□□□ 1.72
RAB40C-212ENST00000569575 OSMRQ99650 979 aa25.81■■□□□ 1.72
RAB40C-212ENST00000569575 POLD4Q9HCU8 107 aa25.81■■□□□ 1.72
RAB40C-212ENST00000569575 CHST12Q9NRB3 414 aa25.81■■□□□ 1.72
RAB40C-212ENST00000569575 DENND3A2RUS2 1198 aa25.8■■□□□ 1.72
RAB40C-212ENST00000569575 INO80B-WBP1J3KQ70 363 aa25.8■■□□□ 1.72
RAB40C-212ENST00000569575 ACKR2O00590 384 aa25.8■■□□□ 1.72
RAB40C-212ENST00000569575 RPS6KA5O75582 802 aa25.8■■□□□ 1.72
RAB40C-212ENST00000569575 GCNT3O95395 438 aa25.8■■□□□ 1.72
RAB40C-212ENST00000569575 MBTD1Q05BQ5 628 aa25.8■■□□□ 1.72
RAB40C-212ENST00000569575 STIM1Q13586 685 aa25.8■■□□□ 1.72
RAB40C-212ENST00000569575 BMT2Q1RMZ1 405 aa25.8■■□□□ 1.72
RAB40C-212ENST00000569575 EPM2AIP1Q7L775 607 aaPredicted RBP25.8■■□□□ 1.72
RAB40C-212ENST00000569575 RPUSD2Q8IZ73 545 aaKnown RBP25.8■■□□□ 1.72
RAB40C-212ENST00000569575 GUF1Q8N442 669 aaKnown RBP25.8■■□□□ 1.72
RAB40C-212ENST00000569575 ANP32EQ9BTT0 268 aa25.8■■□□□ 1.72
RAB40C-212ENST00000569575 CCDC113Q9H0I3 377 aa25.8■■□□□ 1.72
RAB40C-212ENST00000569575 CGNQ9P2M7 1197 aaKnown RBP25.8■■□□□ 1.72
RAB40C-212ENST00000569575 MAN1B1Q9UKM7 699 aa25.8■■□□□ 1.72
RAB40C-212ENST00000569575 TBX20Q9UMR3 447 aa25.8■■□□□ 1.72
RAB40C-212ENST00000569575 GINS2Q9Y248 185 aa25.8■■□□□ 1.72
RAB40C-212ENST00000569575 ALPK3Q96L96 1907 aa25.79■■□□□ 1.72
RAB40C-212ENST00000569575 BRCA2P51587 3418 aa25.79■■□□□ 1.72
RAB40C-212ENST00000569575 ERLIN2O94905 339 aa25.79■■□□□ 1.72
RAB40C-212ENST00000569575 CTSHP09668 335 aa25.79■■□□□ 1.72
RAB40C-212ENST00000569575 L1TD1Q5T7N2 865 aaKnown RBP25.79■■□□□ 1.72
RAB40C-212ENST00000569575 ZPBP2Q6X784 338 aa25.79■■□□□ 1.72
RAB40C-212ENST00000569575 APBB1IPQ7Z5R6 666 aaPredicted RBP25.79■■□□□ 1.72
RAB40C-212ENST00000569575 MLKLQ8NB16 471 aa25.79■■□□□ 1.72
RAB40C-212ENST00000569575 DPF3Q92784 378 aa25.79■■□□□ 1.72
RAB40C-212ENST00000569575 CCDC51Q96ER9 411 aa25.79■■□□□ 1.72
RAB40C-212ENST00000569575 ACCSQ96QU6 501 aa25.79■■□□□ 1.72
RAB40C-212ENST00000569575 FTHL17Q9BXU8 183 aa25.79■■□□□ 1.72
RAB40C-212ENST00000569575 PRDM5Q9NQX1 630 aaPredicted RBP25.79■■□□□ 1.72
RAB40C-212ENST00000569575 DACH1Q9UI36 760 aa25.79■■□□□ 1.72
RAB40C-212ENST00000569575 TRIM43BA6NCK2 446 aa25.78■■□□□ 1.72
RAB40C-212ENST00000569575 PIGRP01833 764 aa25.78■■□□□ 1.72
RAB40C-212ENST00000569575 CXCL10P02778 98 aa25.78■■□□□ 1.72
RAB40C-212ENST00000569575 NMT1P30419 496 aaKnown RBP25.78■■□□□ 1.72
RAB40C-212ENST00000569575 STK4Q13043 487 aa25.78■■□□□ 1.72
RAB40C-212ENST00000569575 HSP90AA2PQ14568 343 aaPredicted RBP25.78■■□□□ 1.72
RAB40C-212ENST00000569575 FOXR2Q6PJQ5 311 aa25.78■■□□□ 1.72
RAB40C-212ENST00000569575 SASS6Q6UVJ0 657 aa25.78■■□□□ 1.72
RAB40C-212ENST00000569575 MAP4K3Q8IVH8 894 aa25.78■■□□□ 1.72
RAB40C-212ENST00000569575 MYOCDQ8IZQ8 938 aa25.78■■□□□ 1.72
RAB40C-212ENST00000569575 TRIM43Q96BQ3 446 aaPredicted RBP25.78■■□□□ 1.72
RAB40C-212ENST00000569575 MRPL4Q9BYD3 311 aaKnown RBP25.78■■□□□ 1.72
RAB40C-212ENST00000569575 CDHR5Q9HBB8 845 aa25.78■■□□□ 1.72
RAB40C-212ENST00000569575 ADGRA3Q8IWK6 1321 aa25.78■■□□□ 1.72
RAB40C-212ENST00000569575 TANC1Q9C0D5 1861 aa25.78■■□□□ 1.72
RAB40C-212ENST00000569575 PRKCBP05771 671 aa25.77■■□□□ 1.72
RAB40C-212ENST00000569575 PAK2Q13177 524 aa25.77■■□□□ 1.72
RAB40C-212ENST00000569575 LPIN1Q14693 890 aa25.77■■□□□ 1.72
RAB40C-212ENST00000569575 CATSPER4Q7RTX7 472 aa25.77■■□□□ 1.72
RAB40C-212ENST00000569575 GOLGA5Q8TBA6 731 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms