RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 KCTD17Q8N5Z5 321 aa14.17□□□□□ -0.14
CDT1-203ENST00000569140 SYT2Q8N9I0 419 aaPredicted RBP14.17□□□□□ -0.14
CDT1-203ENST00000569140 LARP4BQ92615 738 aaKnown RBP14.17□□□□□ -0.14
CDT1-203ENST00000569140 RNF216Q9NWF9 866 aaPredicted RBP14.17□□□□□ -0.14
CDT1-203ENST00000569140 MTUS1Q9ULD2 1270 aa14.17□□□□□ -0.14
CDT1-203ENST00000569140 RANBP2P49792 3224 aaKnown RBP14.17□□□□□ -0.14
CDT1-203ENST00000569140 TMEM265A0A087WTH1 108 aa14.16□□□□□ -0.14
CDT1-203ENST00000569140 SFI1A8K8P3 1242 aa14.16□□□□□ -0.14
CDT1-203ENST00000569140 TBCAO75347 108 aaKnown RBP14.16□□□□□ -0.14
CDT1-203ENST00000569140 NAMPTP43490 491 aa14.16□□□□□ -0.14
CDT1-203ENST00000569140 MBTD1Q05BQ5 628 aa14.16□□□□□ -0.14
CDT1-203ENST00000569140 BTG3Q14201 252 aaPredicted RBP14.16□□□□□ -0.14
CDT1-203ENST00000569140 DSC3Q14574 896 aa14.16□□□□□ -0.14
CDT1-203ENST00000569140 LONRF3Q496Y0 759 aa14.16□□□□□ -0.14
CDT1-203ENST00000569140 GPR153Q6NV75 609 aa14.16□□□□□ -0.14
CDT1-203ENST00000569140 CCDC73Q6ZRK6 1079 aa14.16□□□□□ -0.14
CDT1-203ENST00000569140 C1orf186Q6ZWK4 172 aa14.16□□□□□ -0.14
CDT1-203ENST00000569140 ARNTL2Q8WYA1 636 aa14.16□□□□□ -0.14
CDT1-203ENST00000569140 CPB2Q96IY4 423 aa14.16□□□□□ -0.14
CDT1-203ENST00000569140 TIPINQ9BVW5 301 aa14.16□□□□□ -0.14
CDT1-203ENST00000569140 C2orf40Q9H1Z8 148 aa14.16□□□□□ -0.14
CDT1-203ENST00000569140 TTYH1Q9H313 450 aaPredicted RBP14.16□□□□□ -0.14
CDT1-203ENST00000569140 AGPAT5Q9NUQ2 364 aa14.16□□□□□ -0.14
CDT1-203ENST00000569140 FAM13BQ9NYF5 915 aa14.16□□□□□ -0.14
CDT1-203ENST00000569140 STK17AQ9UEE5 414 aa14.16□□□□□ -0.14
CDT1-203ENST00000569140 MORC2Q9Y6X9 1032 aaPredicted RBP14.16□□□□□ -0.14
CDT1-203ENST00000569140 C9IYK1 514 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 TSPAN1O60635 241 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 FAM13AO94988 1023 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 ARHGEF15O94989 841 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 FGFR1P11362 822 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 GUCY2CP25092 1073 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 GATMP50440 423 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 MAPK6Q16659 721 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 SPOUT1Q5T280 376 aaKnown RBP14.15□□□□□ -0.14
CDT1-203ENST00000569140 ABI1Q8IZP0 508 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 FIBCD1Q8N539 461 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 LRRC15Q8TF66 581 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 DHX58Q96C10 678 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 TRIM6Q9C030 488 aaPredicted RBP14.15□□□□□ -0.14
CDT1-203ENST00000569140 SEMA6BQ9H3T3 888 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 KMT5AQ9NQR1 393 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 CHST12Q9NRB3 414 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 BLOC1S4Q9NUP1 217 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 KCND2Q9NZV8 630 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 PCDHA7Q9UN72 937 aa14.15□□□□□ -0.14
CDT1-203ENST00000569140 ADGRA3Q8IWK6 1321 aa14.15□□□□□ -0.15
CDT1-203ENST00000569140 TBKBP1A7MCY6 615 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 B4GALT5O43286 388 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 PRKCBP05771 671 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 DDIT3P35638 169 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 HTRA4P83105 476 aaPredicted RBP14.14□□□□□ -0.15
CDT1-203ENST00000569140 TAP1Q03518 808 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 POU5F1BQ06416 359 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 PRPF4BQ13523 1007 aaKnown RBP14.14□□□□□ -0.15
CDT1-203ENST00000569140 CDCA2Q69YH5 1023 aaPredicted RBP14.14□□□□□ -0.15
CDT1-203ENST00000569140 NOTUMQ6P988 496 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 SHC4Q6S5L8 630 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 FAM43BQ6ZT52 329 aaPredicted RBP14.14□□□□□ -0.15
CDT1-203ENST00000569140 SV2BQ7L1I2 683 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 DYMQ7RTS9 669 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 ECHDC2Q86YB7 292 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 LEO1Q8WVC0 666 aaPredicted RBP14.14□□□□□ -0.15
CDT1-203ENST00000569140 REEP2Q9BRK0 252 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 APOL6Q9BWW8 343 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 NFKBIZQ9BYH8 718 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 PRDM12Q9H4Q4 367 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 GDPD2Q9HCC8 539 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 PRMT7Q9NVM4 692 aaPredicted RBP14.14□□□□□ -0.15
CDT1-203ENST00000569140 TMEM161AQ9NX61 479 aa14.14□□□□□ -0.15
CDT1-203ENST00000569140 A0A087X0B3 334 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.13□□□□□ -0.15
CDT1-203ENST00000569140 LINC01553A4QN01 128 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 SLC16A4O15374 487 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 DGKIO75912 1065 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 SKIP12755 728 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 AXLP30530 894 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 NPTX2P47972 431 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 RAB27AP51159 221 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 EFNA5P52803 228 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 SMTNP53814 917 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 MAPK7Q13164 816 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 GRIN2CQ14957 1233 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 PCBP1Q15365 356 aaKnown RBP eCLIP14.13□□□□□ -0.155e-7■■■□□ 15.5
CDT1-203ENST00000569140 ARSHQ5FYA8 562 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 SPRED2Q7Z698 418 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 CDR2LQ86X02 465 aaPredicted RBP14.13□□□□□ -0.15
CDT1-203ENST00000569140 IFNLR1Q8IU57 520 aaPredicted RBP14.13□□□□□ -0.15
CDT1-203ENST00000569140 DAW1Q8N136 415 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 MYCT1Q8N699 235 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 MYLIPQ8WY64 445 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 LPPQ93052 612 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 TGS1Q96RS0 853 aaKnown RBP14.13□□□□□ -0.15
CDT1-203ENST00000569140 SCAND2PQ9GZW5 306 aaPredicted RBP14.13□□□□□ -0.15
CDT1-203ENST00000569140 ELAC1Q9H777 363 aaKnown RBP14.13□□□□□ -0.15
CDT1-203ENST00000569140 FAM105AQ9NUU6 356 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 RCOR1Q9UKL0 485 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 INPP5FQ9Y2H2 1132 aa14.13□□□□□ -0.15
CDT1-203ENST00000569140 A0A0U1RQF3 1178 aa14.12□□□□□ -0.15
CDT1-203ENST00000569140 K7ENM7 598 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms