RNA–Protein interactions for RNA: ENST00000565990.2

SF3B3-206, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-206ENST00000565990 SEL1LQ9UBV2 794 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 TET1Q8NFU7 2136 aa13.93□□□□□ -0.18
SF3B3-206ENST00000565990 KINO60870 393 aaKnown RBP13.92□□□□□ -0.18
SF3B3-206ENST00000565990 NBNO60934 754 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 PRR29P0C7W0 189 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 DARSP14868 501 aaKnown RBP13.92□□□□□ -0.18
SF3B3-206ENST00000565990 RAG1P15918 1043 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 PEX3P56589 373 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 CACNB1Q02641 598 aaPredicted RBP13.92□□□□□ -0.18
SF3B3-206ENST00000565990 PSMD2Q13200 908 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 LPIN1Q14693 890 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 KCNB1Q14721 858 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 POSTNQ15063 836 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 PCBP1Q15365 356 aaKnown RBP eCLIP13.92□□□□□ -0.186e-11■■□□□ 14.4
SF3B3-206ENST00000565990 HERC4Q5GLZ8 1057 aaPredicted RBP13.92□□□□□ -0.18
SF3B3-206ENST00000565990 FBXO47Q5MNV8 452 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 NT5DC1Q5TFE4 455 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 ZNF720Q7Z2F6 126 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 CCDC65Q8IXS2 484 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 MYCT1Q8N699 235 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 SLC17A8Q8NDX2 589 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 TMEM40Q8WWA1 233 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 GSDMAQ96QA5 445 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 FUCA2Q9BTY2 467 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 GCOM2Q9BZD3 368 aaPredicted RBP13.92□□□□□ -0.18
SF3B3-206ENST00000565990 INO80BQ9C086 356 aaPredicted RBP13.92□□□□□ -0.18
SF3B3-206ENST00000565990 FZD8Q9H461 694 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 MINDY3Q9H8M7 445 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 OLFML3Q9NRN5 406 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 ARHGAP28Q9P2N2 729 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 HOOK1Q9UJC3 728 aaKnown RBP13.92□□□□□ -0.18
SF3B3-206ENST00000565990 NR2E3Q9Y5X4 410 aa13.92□□□□□ -0.18
SF3B3-206ENST00000565990 TBCAO75347 108 aaKnown RBP13.91□□□□□ -0.18
SF3B3-206ENST00000565990 FAM13AO94988 1023 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 RPN1P04843 607 aaKnown RBP13.91□□□□□ -0.18
SF3B3-206ENST00000565990 IDEP14735 1019 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 EFNA5P52803 228 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 SMTNP53814 917 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 NCKAP1LP55160 1127 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 GTF2BQ00403 316 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 PNOCQ13519 176 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 FAM187BQ17R55 369 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 ODR4Q5SWX8 454 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 TMEM199Q8N511 208 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 TMEM161BQ8NDZ6 487 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 NLRP7Q8WX94 980 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 OSMRQ99650 979 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 C2orf40Q9H1Z8 148 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 CLSTN2Q9H4D0 955 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 AGO3Q9H9G7 860 aaKnown RBP13.91□□□□□ -0.18
SF3B3-206ENST00000565990 KMT5AQ9NQR1 393 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 PRDM5Q9NQX1 630 aaPredicted RBP13.91□□□□□ -0.18
SF3B3-206ENST00000565990 PRKAG2Q9UGJ0 569 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 PCDHA5Q9Y5H7 936 aa13.91□□□□□ -0.18
SF3B3-206ENST00000565990 ADGRA3Q8IWK6 1321 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 CCDC169A6NNP5 214 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 H0YCG3 227 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 PPP1R37O75864 691 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 RHOBTB3O94955 611 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 CTSHP09668 335 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 CCDC192P0DO97 292 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 PHKA2P46019 1235 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 CCL23P55773 120 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 ASIC1P78348 528 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 MBTD1Q05BQ5 628 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 COASYQ13057 564 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 DMP1Q13316 513 aaPredicted RBP13.9□□□□□ -0.18
SF3B3-206ENST00000565990 KMT5BQ4FZB7 885 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 PLEKHG4Q58EX7 1191 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 PPP4R3CPQ6ZMV5 832 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 EPM2AIP1Q7L775 607 aaPredicted RBP13.9□□□□□ -0.18
SF3B3-206ENST00000565990 MTERF4Q7Z6M4 381 aaKnown RBP13.9□□□□□ -0.18
SF3B3-206ENST00000565990 FAM178BQ8IXR5 827 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 BADQ92934 168 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 SCLYQ96I15 445 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 NLRP4Q96MN2 994 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 PPP1R12CQ9BZL4 782 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 CCDC113Q9H0I3 377 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 ERVK-5Q9HDB9 667 aa13.9□□□□□ -0.18
SF3B3-206ENST00000565990 NOC2LQ9Y3T9 749 aaKnown RBP13.9□□□□□ -0.18
SF3B3-206ENST00000565990 K7ERI5 159 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 GPR182O15218 404 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 SLC16A4O15374 487 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 CSF2RAP15509 400 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 ABCD1P33897 745 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 AMHR2Q16671 573 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 RBM43Q6ZSC3 357 aaKnown RBP13.89□□□□□ -0.19
SF3B3-206ENST00000565990 TSHZ1Q6ZSZ6 1077 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 C16orf59Q7L2K0 433 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 TAS1R3Q7RTX0 852 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 HAUS6Q7Z4H7 955 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 SFR1Q86XK3 245 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 RPUSD2Q8IZ73 545 aaKnown RBP13.89□□□□□ -0.19
SF3B3-206ENST00000565990 DEPTORQ8TB45 409 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 ZNF507Q8TCN5 953 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 ZNF668Q96K58 619 aaPredicted RBP13.89□□□□□ -0.19
SF3B3-206ENST00000565990 PRIMPOLQ96LW4 560 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 PPP1R16BQ96T49 567 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 ZHX3Q9H4I2 956 aa13.89□□□□□ -0.19
SF3B3-206ENST00000565990 KIAA1468Q9P260 1216 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms