RNA–Protein interactions for RNA: ENST00000562389.5

CLK3-207, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-207ENST00000562389 INSL6Q9Y581 213 aa18.5■□□□□ 0.55
CLK3-207ENST00000562389 INO80B-WBP1J3KQ70 363 aa18.49■□□□□ 0.55
CLK3-207ENST00000562389 CA3P07451 260 aa18.49■□□□□ 0.55
CLK3-207ENST00000562389 STAG3L1P0CL83 205 aa18.49■□□□□ 0.55
CLK3-207ENST00000562389 NCLP19338 710 aaKnown RBP18.49■□□□□ 0.55
CLK3-207ENST00000562389 FAM189BP81408 668 aa18.49■□□□□ 0.55
CLK3-207ENST00000562389 NAALADL2Q58DX5 795 aa18.49■□□□□ 0.55
CLK3-207ENST00000562389 SHC4Q6S5L8 630 aa18.49■□□□□ 0.55
CLK3-207ENST00000562389 GPBP1Q86WP2 473 aa18.49■□□□□ 0.55
CLK3-207ENST00000562389 ZBTB8OSQ8IWT0 167 aa18.49■□□□□ 0.55
CLK3-207ENST00000562389 SP7Q8TDD2 431 aaPredicted RBP18.49■□□□□ 0.55
CLK3-207ENST00000562389 CHAMP1Q96JM3 812 aa18.49■□□□□ 0.55
CLK3-207ENST00000562389 SPATA32Q96LK8 384 aa18.49■□□□□ 0.55
CLK3-207ENST00000562389 TRAIPQ9BWF2 469 aa18.49■□□□□ 0.55
CLK3-207ENST00000562389 ELAC1Q9H777 363 aaKnown RBP18.49■□□□□ 0.55
CLK3-207ENST00000562389 RC3H2Q9HBD1 1191 aaKnown RBP18.49■□□□□ 0.55
CLK3-207ENST00000562389 POLD4Q9HCU8 107 aa18.49■□□□□ 0.55
CLK3-207ENST00000562389 CIZ1Q9ULV3 898 aaPredicted RBP18.49■□□□□ 0.55
CLK3-207ENST00000562389 PIN4Q9Y237 131 aaKnown RBP18.49■□□□□ 0.55
CLK3-207ENST00000562389 A0A087X0B3 334 aa18.48■□□□□ 0.55
CLK3-207ENST00000562389 ERLIN2O94905 339 aa18.48■□□□□ 0.55
CLK3-207ENST00000562389 AXLP30530 894 aa18.48■□□□□ 0.55
CLK3-207ENST00000562389 AMHR2Q16671 573 aa18.48■□□□□ 0.55
CLK3-207ENST00000562389 ARSHQ5FYA8 562 aa18.48■□□□□ 0.55
CLK3-207ENST00000562389 DEPTORQ8TB45 409 aa18.48■□□□□ 0.55
CLK3-207ENST00000562389 YME1L1Q96TA2 773 aa18.48■□□□□ 0.55
CLK3-207ENST00000562389 SCAND2PQ9GZW5 306 aaPredicted RBP18.48■□□□□ 0.55
CLK3-207ENST00000562389 TTYH1Q9H313 450 aaPredicted RBP18.48■□□□□ 0.55
CLK3-207ENST00000562389 SLC28A3Q9HAS3 691 aa18.48■□□□□ 0.55
CLK3-207ENST00000562389 ODF2LQ9ULJ1 636 aa18.48■□□□□ 0.55
CLK3-207ENST00000562389 FNDC1Q4ZHG4 1894 aaPredicted RBP18.48■□□□□ 0.55
CLK3-207ENST00000562389 A0A0U1RQF3 1178 aa18.47■□□□□ 0.55
CLK3-207ENST00000562389 LCHNA4D1U4 455 aa18.47■□□□□ 0.55
CLK3-207ENST00000562389 TSPAN1O60635 241 aa18.47■□□□□ 0.55
CLK3-207ENST00000562389 DGKIO75912 1065 aa18.47■□□□□ 0.55
CLK3-207ENST00000562389 HOXA11P31270 313 aaPredicted RBP18.47■□□□□ 0.55
CLK3-207ENST00000562389 STAT6P42226 847 aa18.47■□□□□ 0.55
CLK3-207ENST00000562389 DMP1Q13316 513 aaPredicted RBP18.47■□□□□ 0.55
CLK3-207ENST00000562389 DHX8Q14562 1220 aaKnown RBP18.47■□□□□ 0.55
CLK3-207ENST00000562389 FAM187BQ17R55 369 aa18.47■□□□□ 0.55
CLK3-207ENST00000562389 RESP18Q5W5W9 173 aa18.47■□□□□ 0.55
CLK3-207ENST00000562389 PPP2R2DQ66LE6 453 aa18.47■□□□□ 0.55
CLK3-207ENST00000562389 TWF2Q6IBS0 349 aaKnown RBP18.47■□□□□ 0.55
CLK3-207ENST00000562389 PPP4R3CPQ6ZMV5 832 aa18.47■□□□□ 0.55
CLK3-207ENST00000562389 ZNF689Q96CS4 500 aaPredicted RBP18.47■□□□□ 0.55
CLK3-207ENST00000562389 PRIMPOLQ96LW4 560 aa18.47■□□□□ 0.55
CLK3-207ENST00000562389 CCDC113Q9H0I3 377 aa18.47■□□□□ 0.55
CLK3-207ENST00000562389 ZNF576Q9H609 170 aa18.47■□□□□ 0.55
CLK3-207ENST00000562389 PRMT7Q9NVM4 692 aaPredicted RBP18.47■□□□□ 0.55
CLK3-207ENST00000562389 TMEM161AQ9NX61 479 aa18.47■□□□□ 0.55
CLK3-207ENST00000562389 LRFN2Q9ULH4 789 aa18.47■□□□□ 0.55
CLK3-207ENST00000562389 PCDHB7Q9Y5E2 793 aa18.47■□□□□ 0.55
CLK3-207ENST00000562389 ADGRA3Q8IWK6 1321 aa18.47■□□□□ 0.55
CLK3-207ENST00000562389 RALGAPA2Q2PPJ7 1873 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 NLRC5Q86WI3 1866 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 NPHP3-ACAD11A0A0J9YXS1 232 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 PLS3P13797 630 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 NPTX2P47972 431 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 RAB27AP51159 221 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 EFNA5P52803 228 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 PEX3P56589 373 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 RAD51AP2Q09MP3 1159 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 E2F4Q16254 413 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 ECHDC2Q86YB7 292 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 DEFB123Q8N688 67 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 CCDC51Q96ER9 411 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 REEP2Q9BRK0 252 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 SEMA6BQ9H3T3 888 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 FZD8Q9H461 694 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 FAM13BQ9NYF5 915 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 KCNG1Q9UIX4 513 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 PHLPP2Q6ZVD8 1323 aa18.46■□□□□ 0.55
CLK3-207ENST00000562389 LINC01553A4QN01 128 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 ARHGEF15O94989 841 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 SKIP12755 728 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 CACNB1Q02641 598 aaPredicted RBP18.45■□□□□ 0.54
CLK3-207ENST00000562389 TAP1Q03518 808 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 NCBP1Q09161 790 aaKnown RBP18.45■□□□□ 0.54
CLK3-207ENST00000562389 GIT2Q14161 759 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 MAPK6Q16659 721 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 ADALQ6DHV7 355 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 NOTUMQ6P988 496 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 Q7L0L9 218 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 SV2BQ7L1I2 683 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 ZNF598Q86UK7 904 aaKnown RBP18.45■□□□□ 0.54
CLK3-207ENST00000562389 PDILTQ8N807 584 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 SPIRE2Q8WWL2 714 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 NTPCRQ9BSD7 190 aaKnown RBP18.45■□□□□ 0.54
CLK3-207ENST00000562389 KIFC3Q9BVG8 833 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 PANK2Q9BZ23 570 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 CUEDC2Q9H467 287 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 KMT5AQ9NQR1 393 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 FAM105AQ9NUU6 356 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 ARHGAP28Q9P2N2 729 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 CNTNAP2Q9UHC6 1331 aa18.45■□□□□ 0.54
CLK3-207ENST00000562389 CCDC169A6NNP5 214 aa18.44■□□□□ 0.54
CLK3-207ENST00000562389 SFI1A8K8P3 1242 aa18.44■□□□□ 0.54
CLK3-207ENST00000562389 EOMESO95936 686 aa18.44■□□□□ 0.54
CLK3-207ENST00000562389 PRKCBP05771 671 aa18.44■□□□□ 0.54
CLK3-207ENST00000562389 KRT18P05783 430 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms