RNA–Protein interactions for RNA: ENST00000561940.1

SMG1-204, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 964 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-204ENST00000561940 PRPF6O94906 941 aaKnown RBP8.3□□□□□ -1.08
SMG1-204ENST00000561940 CFBP00751 764 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 LPLP06858 475 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 OSMP13725 252 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 ENPP1P22413 925 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 EPHB4P54760 987 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 ANTXR2P58335 489 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 ZNF568Q3ZCX4 644 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 TOR2AQ5JU69 321 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 TMEM200BQ69YZ2 307 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 ESPNLQ6ZVH7 1005 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 PRRT2Q7Z6L0 340 aaPredicted RBP8.3□□□□□ -1.08
SMG1-204ENST00000561940 NME9Q86XW9 330 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 TPH2Q8IWU9 490 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 AMOTL1Q8IY63 956 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 ACAP3Q96P50 834 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 DNAJC28Q9NX36 388 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 GABBR1Q9UBS5 961 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 SLC4A7Q9Y6M7 1214 aa8.3□□□□□ -1.08
SMG1-204ENST00000561940 GPR42O15529 346 aa8.29□□□□□ -1.08
SMG1-204ENST00000561940 PF4V1P10720 104 aa8.29□□□□□ -1.08
SMG1-204ENST00000561940 MRE11P49959 708 aa8.29□□□□□ -1.08
SMG1-204ENST00000561940 MEOX1P50221 254 aa8.29□□□□□ -1.08
SMG1-204ENST00000561940 ACAP2Q15057 778 aa8.29□□□□□ -1.08
SMG1-204ENST00000561940 FSCN1Q16658 493 aaKnown RBP8.29□□□□□ -1.08
SMG1-204ENST00000561940 PITRM1Q5JRX3 1037 aa8.29□□□□□ -1.08
SMG1-204ENST00000561940 MYO1HQ8N1T3 1032 aa8.29□□□□□ -1.08
SMG1-204ENST00000561940 CPA6Q8N4T0 437 aa8.29□□□□□ -1.08
SMG1-204ENST00000561940 FERMT2Q96AC1 680 aa8.29□□□□□ -1.08
SMG1-204ENST00000561940 TEKT5Q96M29 485 aa8.29□□□□□ -1.08
SMG1-204ENST00000561940 LMF1Q96S06 567 aa8.29□□□□□ -1.08
SMG1-204ENST00000561940 SSBP3Q9BWW4 388 aaPredicted RBP8.29□□□□□ -1.08
SMG1-204ENST00000561940 ST6GALNAC2Q9UJ37 374 aa8.29□□□□□ -1.08
SMG1-204ENST00000561940 NR2E1Q9Y466 385 aa8.29□□□□□ -1.08
SMG1-204ENST00000561940 ZRANB2O95218 330 aaKnown RBP eCLIP8.28□□□□□ -1.08
SMG1-204ENST00000561940 RECQLP46063 649 aaPredicted RBP8.28□□□□□ -1.08
SMG1-204ENST00000561940 TCIRG1Q13488 830 aa8.28□□□□□ -1.08
SMG1-204ENST00000561940 ZMAT1Q5H9K5 638 aa8.28□□□□□ -1.08
SMG1-204ENST00000561940 FAM102BQ5T8I3 360 aa8.28□□□□□ -1.08
SMG1-204ENST00000561940 SLFN13Q68D06 897 aa8.28□□□□□ -1.08
SMG1-204ENST00000561940 TRIM68Q6AZZ1 485 aa8.28□□□□□ -1.08
SMG1-204ENST00000561940 CMTR2Q8IYT2 770 aaKnown RBP8.28□□□□□ -1.08
SMG1-204ENST00000561940 BCL6BQ8N143 479 aaPredicted RBP8.28□□□□□ -1.08
SMG1-204ENST00000561940 JADE3Q92613 823 aa8.28□□□□□ -1.08
SMG1-204ENST00000561940 C8orf48Q96LL4 319 aa8.28□□□□□ -1.08
SMG1-204ENST00000561940 SLC2A13Q96QE2 648 aa8.28□□□□□ -1.08
SMG1-204ENST00000561940 MEGF9Q9H1U4 602 aa8.28□□□□□ -1.08
SMG1-204ENST00000561940 C12orf65Q9H3J6 166 aaKnown RBP8.28□□□□□ -1.08
SMG1-204ENST00000561940 TMPRSS11EQ9UL52 423 aa8.28□□□□□ -1.08
SMG1-204ENST00000561940 TBX4P57082 545 aa8.27□□□□□ -1.09
SMG1-204ENST00000561940 KRT85P78386 507 aa8.27□□□□□ -1.09
SMG1-204ENST00000561940 ADCY2Q08462 1091 aa8.27□□□□□ -1.09
SMG1-204ENST00000561940 MAP3K12Q12852 859 aa8.27□□□□□ -1.09
SMG1-204ENST00000561940 ADAM15Q13444 863 aa8.27□□□□□ -1.09
SMG1-204ENST00000561940 TRIM25Q14258 630 aaKnown RBP8.27□□□□□ -1.09
SMG1-204ENST00000561940 ACAP1Q15027 740 aa8.27□□□□□ -1.09
SMG1-204ENST00000561940 MLC1Q15049 377 aa8.27□□□□□ -1.09
SMG1-204ENST00000561940 UGT8Q16880 541 aa8.27□□□□□ -1.09
SMG1-204ENST00000561940 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMG1-204ENST00000561940 TMEM240Q5SV17 173 aa8.27□□□□□ -1.09
SMG1-204ENST00000561940 KIAA1841Q6NSI8 718 aa8.27□□□□□ -1.09
SMG1-204ENST00000561940 TAX1BP1Q86VP1 789 aa8.27□□□□□ -1.09
SMG1-204ENST00000561940 CIR1Q86X95 450 aaPredicted RBP8.27□□□□□ -1.09
SMG1-204ENST00000561940 OR14K1Q8NGZ2 314 aa8.27□□□□□ -1.09
SMG1-204ENST00000561940 NEIL1Q96FI4 390 aaPredicted RBP8.27□□□□□ -1.09
SMG1-204ENST00000561940 KLHL33A6NCF5 533 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 RFPL1O75677 317 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 CT47B1P0C2W7 299 aaPredicted RBP8.26□□□□□ -1.09
SMG1-204ENST00000561940 ATF3P18847 181 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 AGXTP21549 392 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 MTNR1BP49286 362 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 RAC3P60763 192 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 ICAM4Q14773 271 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 AGBL4Q5VU57 503 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 TIGD7Q6NT04 549 aaPredicted RBP8.26□□□□□ -1.09
SMG1-204ENST00000561940 USP30Q70CQ3 517 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 KANSL1Q7Z3B3 1105 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 KCNK18Q7Z418 384 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 TCEAL8Q8IYN2 117 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 GIMAP8Q8ND71 665 aaPredicted RBP8.26□□□□□ -1.09
SMG1-204ENST00000561940 C8orf49Q96NF6 230 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 CAMKK2Q96RR4 588 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 DPYSL5Q9BPU6 564 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 KCTD10Q9H3F6 313 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 TCF7L1Q9HCS4 588 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 SAE1Q9UBE0 346 aaPredicted RBP8.26□□□□□ -1.09
SMG1-204ENST00000561940 ZBTB21Q9ULJ3 1066 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 MRFAP1Q9Y605 127 aa8.26□□□□□ -1.09
SMG1-204ENST00000561940 PFKMP08237 780 aa8.25□□□□□ -1.09
SMG1-204ENST00000561940 C5AR1P21730 350 aa8.25□□□□□ -1.09
SMG1-204ENST00000561940 LGALS4P56470 323 aa8.25□□□□□ -1.09
SMG1-204ENST00000561940 EFCAB2Q5VUJ9 269 aa8.25□□□□□ -1.09
SMG1-204ENST00000561940 NXNQ6DKJ4 435 aa8.25□□□□□ -1.09
SMG1-204ENST00000561940 LYSMD2Q8IV50 215 aa8.25□□□□□ -1.09
SMG1-204ENST00000561940 MAGEB6Q8N7X4 407 aa8.25□□□□□ -1.09
SMG1-204ENST00000561940 CHST13Q8NET6 341 aa8.25□□□□□ -1.09
SMG1-204ENST00000561940 OR5AN1Q8NGI8 311 aa8.25□□□□□ -1.09
SMG1-204ENST00000561940 TTC8Q8TAM2 541 aa8.25□□□□□ -1.09
SMG1-204ENST00000561940 SEC61A2Q9H9S3 476 aa8.25□□□□□ -1.09
SMG1-204ENST00000561940 SMPD4Q9NXE4 827 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms