RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 RRAGCQ9HB90 399 aa4.47□□□□□ -1.69
TDP1-217ENST00000557782 ATP6V0A4Q9HBG4 840 aa4.47□□□□□ -1.69
TDP1-217ENST00000557782 CNNM1Q9NRU3 951 aa4.47□□□□□ -1.69
TDP1-217ENST00000557782 CCDC39Q9UFE4 941 aa4.47□□□□□ -1.69
TDP1-217ENST00000557782 ZC3H7BQ9UGR2 993 aaKnown RBP4.47□□□□□ -1.69
TDP1-217ENST00000557782 USP21Q9UK80 565 aa4.47□□□□□ -1.69
TDP1-217ENST00000557782 SLC45A1Q9Y2W3 748 aa4.47□□□□□ -1.69
TDP1-217ENST00000557782 CDY2AQ9Y6F7 541 aa4.47□□□□□ -1.69
TDP1-217ENST00000557782 FAM90A27PA6NNH2 459 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 FAM171A2A8MVW0 826 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 SLC27A2O14975 620 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 BAIAP3O94812 1187 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 ARIH2O95376 493 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 PRLP01236 227 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 PFKMP08237 780 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 VSIG8P0DPA2 414 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 HARSP12081 509 aaKnown RBP4.46□□□□□ -1.7
TDP1-217ENST00000557782 BRAFP15056 766 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 CAPN3P20807 821 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 RPL10P27635 214 aaKnown RBP4.46□□□□□ -1.7
TDP1-217ENST00000557782 SLC7A1P30825 629 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 ELF1P32519 619 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 ALDH9A1P49189 494 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 CORO7P57737 925 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 HERVK_113P62684 666 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 ROM1Q03395 351 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 PPARAQ07869 468 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 ADCY2Q08462 1091 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 IL10RAQ13651 578 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 TRIM25Q14258 630 aaKnown RBP4.46□□□□□ -1.7
TDP1-217ENST00000557782 NR0B2Q15466 257 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 ADRM1Q16186 407 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 CCDC96Q2M329 555 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 MPEG1Q2M385 716 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 ARL13BQ3SXY8 428 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 FAM133BQ5BKY9 247 aaKnown RBP4.46□□□□□ -1.7
TDP1-217ENST00000557782 EMC4Q5J8M3 183 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 CDKAL1Q5VV42 579 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 STEAP3Q658P3 488 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 FAM180AQ6UWF9 173 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 LMBR1LQ6UX01 489 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 TMC6Q7Z403 805 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 THAP5Q7Z6K1 395 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 C3orf20Q8ND61 904 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 IL31RAQ8NI17 732 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 SLC30A5Q8TAD4 765 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 PLEKHO2Q8TD55 490 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 ASB15Q8WXK1 588 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 KAT5Q92993 513 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 ZNF566Q969W8 418 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 TRIM11Q96F44 468 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 SLC35A4Q96G79 324 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 MYRFLQ96LU7 910 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 NT5C1BQ96P26 610 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 PLVAPQ9BX97 442 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 OSBPL5Q9H0X9 879 aaPredicted RBP4.46□□□□□ -1.7
TDP1-217ENST00000557782 KCNF1Q9H3M0 494 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 GREM2Q9H772 168 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 C14orf93Q9H972 538 aaKnown RBP4.46□□□□□ -1.7
TDP1-217ENST00000557782 ITM2CQ9NQX7 267 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 DACT1Q9NYF0 836 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 ZSWIM5Q9P217 1185 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 LRFN1Q9P244 771 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 STAP2Q9UGK3 403 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 PRSS50Q9UI38 385 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 TMPRSS11EQ9UL52 423 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 RWDD3Q9Y3V2 267 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 MYPNQ86TC9 1320 aa4.46□□□□□ -1.7
TDP1-217ENST00000557782 TMEM82A0PJX8 343 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 GOLGA6L22H0YM25 854 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 H3BM21 787 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 FAM229AH3BQW9 127 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 H3BUI4 141 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 EYA2O00167 538 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 HGSO14964 777 aaPredicted RBP4.45□□□□□ -1.7
TDP1-217ENST00000557782 SGTAO43765 313 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 CD4P01730 458 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 MMEP08473 750 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 XBP1P17861 261 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 RRM1P23921 792 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 PDIA3P30101 505 aaKnown RBP4.45□□□□□ -1.7
TDP1-217ENST00000557782 MCAMP43121 646 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 GPR15P49685 360 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 HK3P52790 923 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 DSC2Q02487 901 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 NOGQ13253 232 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 MYBPC3Q14896 1274 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 POSTNQ15063 836 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 CNGA2Q16280 664 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 PFKFB4Q16877 469 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 SLC35G1Q2M3R5 365 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 GAB4Q2WGN9 574 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 CIAPIN1Q6FI81 312 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 SLFN12LQ6IEE8 588 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 GGT6Q6P531 493 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 OGFOD3Q6PK18 319 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 BTNL9Q6UXG8 535 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 ZPBP2Q6X784 338 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 KRT77Q7Z794 578 aa4.45□□□□□ -1.7
TDP1-217ENST00000557782 TBC1D1Q86TI0 1168 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms