RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 MMEP08473 750 aa4.66□□□□□ -1.66
FOXN3-217ENST00000557572 PABPC1P11940 636 aaKnown RBP4.66□□□□□ -1.66
FOXN3-217ENST00000557572 NAT1P18440 290 aa4.66□□□□□ -1.66
FOXN3-217ENST00000557572 KRT15P19012 456 aa4.66□□□□□ -1.66
FOXN3-217ENST00000557572 MAMDC2Q7Z304 686 aaPredicted RBP4.66□□□□□ -1.66
FOXN3-217ENST00000557572 PTRH1Q86Y79 214 aaKnown RBP4.66□□□□□ -1.66
FOXN3-217ENST00000557572 CCSER2Q9H7U1 834 aa4.66□□□□□ -1.66
FOXN3-217ENST00000557572 PRDM16Q9HAZ2 1276 aa4.66□□□□□ -1.66
FOXN3-217ENST00000557572 CAPN10Q9HC96 672 aa4.66□□□□□ -1.66
FOXN3-217ENST00000557572 ALG13Q9NP73 1137 aaKnown RBP4.66□□□□□ -1.66
FOXN3-217ENST00000557572 AKIP1Q9NQ31 210 aa4.66□□□□□ -1.66
FOXN3-217ENST00000557572 KMT5AQ9NQR1 393 aa4.66□□□□□ -1.66
FOXN3-217ENST00000557572 ARHGEF4Q9NR80 690 aa4.66□□□□□ -1.66
FOXN3-217ENST00000557572 SAE1Q9UBE0 346 aaPredicted RBP4.66□□□□□ -1.66
FOXN3-217ENST00000557572 PRAMEF22A3QJZ6 481 aa4.65□□□□□ -1.67
FOXN3-217ENST00000557572 LRRC3CA6NJW4 275 aa4.65□□□□□ -1.67
FOXN3-217ENST00000557572 RNASET2O00584 256 aaKnown RBP4.65□□□□□ -1.67
FOXN3-217ENST00000557572 AQP7O14520 342 aa4.65□□□□□ -1.67
FOXN3-217ENST00000557572 ESRRBO95718 433 aa4.65□□□□□ -1.67
FOXN3-217ENST00000557572 APEX1P27695 318 aaKnown RBP4.65□□□□□ -1.67
FOXN3-217ENST00000557572 CCKBRP32239 447 aa4.65□□□□□ -1.67
FOXN3-217ENST00000557572 IRX6P78412 446 aaPredicted RBP4.65□□□□□ -1.67
FOXN3-217ENST00000557572 PAK1Q13153 545 aa4.65□□□□□ -1.67
FOXN3-217ENST00000557572 RUSC1-AS1Q66K80 236 aa4.65□□□□□ -1.67
FOXN3-217ENST00000557572 NSMFQ6X4W1 530 aa4.65□□□□□ -1.67
FOXN3-217ENST00000557572 NOL8Q76FK4 1167 aaKnown RBP4.65□□□□□ -1.67
FOXN3-217ENST00000557572 C16orf59Q7L2K0 433 aa4.65□□□□□ -1.67
FOXN3-217ENST00000557572 OSTM1Q86WC4 334 aa4.65□□□□□ -1.67
FOXN3-217ENST00000557572 LILRA3Q8N6C8 439 aaPredicted RBP4.65□□□□□ -1.67
FOXN3-217ENST00000557572 SLC9A6Q92581 669 aa4.65□□□□□ -1.67
FOXN3-217ENST00000557572 MRVI1Q9Y6F6 885 aa4.65□□□□□ -1.67
FOXN3-217ENST00000557572 LOC102724159A0A0B4J2E5 919 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 PIPSLA2A3N6 862 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 UNC119BA6NIH7 251 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 STC2O76061 302 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 TOX4O94842 621 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 BMP15O95972 392 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 AMY2AP04746 511 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 VSIG10L2P0DP72 767 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 AMY2BP19961 511 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 ETFBP38117 255 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 NPEPPSP55786 919 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 GUCY1B3Q02153 619 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 IFRD2Q12894 506 aaPredicted RBP4.64□□□□□ -1.67
FOXN3-217ENST00000557572 PWP2Q15269 919 aaKnown RBP4.64□□□□□ -1.67
FOXN3-217ENST00000557572 IQSEC1Q6DN90 963 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 APBB1IPQ7Z5R6 666 aaPredicted RBP4.64□□□□□ -1.67
FOXN3-217ENST00000557572 HIPK4Q8NE63 616 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 CALML6Q8TD86 181 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 SEMA4GQ9NTN9 838 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 CATSPERZQ9NTU4 200 aa4.64□□□□□ -1.67
FOXN3-217ENST00000557572 TRAV20A0A0B4J274 112 aa4.63□□□□□ -1.67
FOXN3-217ENST00000557572 ARVCFO00192 962 aa4.63□□□□□ -1.67
FOXN3-217ENST00000557572 KCNK3O14649 394 aa4.63□□□□□ -1.67
FOXN3-217ENST00000557572 GSTA4O15217 222 aa4.63□□□□□ -1.67
FOXN3-217ENST00000557572 PRODHO43272 600 aa4.63□□□□□ -1.67
FOXN3-217ENST00000557572 APOBEC3AP31941 199 aaPredicted RBP4.63□□□□□ -1.67
FOXN3-217ENST00000557572 MPLP40238 635 aa4.63□□□□□ -1.67
FOXN3-217ENST00000557572 LACTBP83111 547 aaPredicted RBP4.63□□□□□ -1.67
FOXN3-217ENST00000557572 MPP3Q13368 585 aa4.63□□□□□ -1.67
FOXN3-217ENST00000557572 LRRC47Q8N1G4 583 aaKnown RBP4.63□□□□□ -1.67
FOXN3-217ENST00000557572 PLA2G15Q8NCC3 412 aa4.63□□□□□ -1.67
FOXN3-217ENST00000557572 PDPRQ8NCN5 879 aa4.63□□□□□ -1.67
FOXN3-217ENST00000557572 FBXW5Q969U6 566 aa4.63□□□□□ -1.67
FOXN3-217ENST00000557572 CPPED1Q9BRF8 314 aaPredicted RBP4.63□□□□□ -1.67
FOXN3-217ENST00000557572 SLC52A1Q9NWF4 448 aa4.63□□□□□ -1.67
FOXN3-217ENST00000557572 ASB1Q9Y576 335 aa4.63□□□□□ -1.67
FOXN3-217ENST00000557572 ASXL2Q76L83 1435 aa4.63□□□□□ -1.67
FOXN3-217ENST00000557572 ZNF561-AS1K7EIQ3 104 aa4.62□□□□□ -1.67
FOXN3-217ENST00000557572 C1QL1O75973 258 aa4.62□□□□□ -1.67
FOXN3-217ENST00000557572 FGRP09769 529 aa4.62□□□□□ -1.67
FOXN3-217ENST00000557572 SPIDRQ14159 915 aa4.62□□□□□ -1.67
FOXN3-217ENST00000557572 DDR2Q16832 855 aa4.62□□□□□ -1.67
FOXN3-217ENST00000557572 ABHD17BQ5VST6 288 aa4.62□□□□□ -1.67
FOXN3-217ENST00000557572 GDF7Q7Z4P5 450 aa4.62□□□□□ -1.67
FOXN3-217ENST00000557572 SLC44A3Q8N4M1 653 aa4.62□□□□□ -1.67
FOXN3-217ENST00000557572 ASB15Q8WXK1 588 aa4.62□□□□□ -1.67
FOXN3-217ENST00000557572 ZNF408Q9H9D4 720 aa4.62□□□□□ -1.67
FOXN3-217ENST00000557572 RIPOR2Q9Y4F9 1068 aa4.62□□□□□ -1.67
FOXN3-217ENST00000557572 CLSTN1O94985 981 aa4.61□□□□□ -1.67
FOXN3-217ENST00000557572 JUNP05412 331 aaKnown RBP4.61□□□□□ -1.67
FOXN3-217ENST00000557572 IGKV2-30P06310 120 aa4.61□□□□□ -1.67
FOXN3-217ENST00000557572 SDHAP31040 664 aa4.61□□□□□ -1.67
FOXN3-217ENST00000557572 JAM2P57087 298 aa4.61□□□□□ -1.67
FOXN3-217ENST00000557572 BLOC1S1P78537 153 aa4.61□□□□□ -1.67
FOXN3-217ENST00000557572 FHL1Q13642 323 aa4.61□□□□□ -1.67
FOXN3-217ENST00000557572 CMTM4Q8IZR5 234 aa4.61□□□□□ -1.67
FOXN3-217ENST00000557572 CPEB3Q8NE35 698 aaKnown RBP4.61□□□□□ -1.67
FOXN3-217ENST00000557572 PCDH19Q8TAB3 1148 aa4.61□□□□□ -1.67
FOXN3-217ENST00000557572 SLC7A14Q8TBB6 771 aa4.61□□□□□ -1.67
FOXN3-217ENST00000557572 PTPRN2Q92932 1015 aa4.61□□□□□ -1.67
FOXN3-217ENST00000557572 GPATCH3Q96I76 525 aa4.61□□□□□ -1.67
FOXN3-217ENST00000557572 GBP4Q96PP9 640 aa4.61□□□□□ -1.67
FOXN3-217ENST00000557572 BCCIPQ9P287 314 aaKnown RBP eCLIP4.61□□□□□ -1.67
FOXN3-217ENST00000557572 DKK2Q9UBU2 259 aa4.61□□□□□ -1.67
FOXN3-217ENST00000557572 SALL3Q9BXA9 1300 aa4.61□□□□□ -1.67
FOXN3-217ENST00000557572 BLACEA4D250 179 aa4.6□□□□□ -1.67
FOXN3-217ENST00000557572 RAB11FIP3O75154 756 aa4.6□□□□□ -1.67
FOXN3-217ENST00000557572 SF3A1Q15459 793 aaKnown RBP4.6□□□□□ -1.67
FOXN3-217ENST00000557572 FAM214AQ32MH5 1076 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms