RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 CDCA5Q96FF9 252 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 FAM84BQ96KN1 310 aaPredicted RBP5.16□□□□□ -1.58
VTI1B-203ENST00000554636 MEIS3Q99687 375 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 GBA2Q9HCG7 927 aaPredicted RBP5.16□□□□□ -1.58
VTI1B-203ENST00000554636 JAG2Q9Y219 1238 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 EMC9Q9Y3B6 208 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 PCDHAC2Q9Y5I4 1007 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 LRRFIP2Q9Y608 721 aaKnown RBP5.16□□□□□ -1.58
VTI1B-203ENST00000554636 MYH13Q9UKX3 1938 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 SSC5DA1L4H1 1573 aa5.16□□□□□ -1.58
VTI1B-203ENST00000554636 BUB1BO60566 1050 aaPredicted RBP5.15□□□□□ -1.59
VTI1B-203ENST00000554636 CIAO1O76071 339 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 PDE8BO95263 885 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 CYBBP04839 570 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 THBDP07204 575 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 INHBBP09529 407 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 FGRP09769 529 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 HSPA8P11142 646 aaKnown RBP5.15□□□□□ -1.59
VTI1B-203ENST00000554636 BMP7P18075 431 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 HIBADHP31937 336 aaKnown RBP5.15□□□□□ -1.59
VTI1B-203ENST00000554636 MMP14P50281 582 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 AFF3P51826 1226 aaKnown RBP5.15□□□□□ -1.59
VTI1B-203ENST00000554636 HUNKP57058 714 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 CORO7P57737 925 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 PRR5P85299 388 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 ARID5AQ03989 594 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 CBX2Q14781 532 aaPredicted RBP5.15□□□□□ -1.59
VTI1B-203ENST00000554636 NR1I3Q14994 352 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 CNKSR3Q6P9H4 555 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 POMZP3Q6PJE2 187 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 ATF7IPQ6VMQ6 1270 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 CABP7Q86V35 215 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 MCF2L2Q86YR7 1114 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 RASAL3Q86YV0 1011 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 SIAH1Q8IUQ4 282 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 TRIM59Q8IWR1 403 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 TMEFF1Q8IYR6 380 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 CRACR2BQ8N4Y2 399 aaPredicted RBP5.15□□□□□ -1.59
VTI1B-203ENST00000554636 HNRNPLLQ8WVV9 542 aaKnown RBP5.15□□□□□ -1.59
VTI1B-203ENST00000554636 EPB41L4AQ9HCS5 686 aaPredicted RBP5.15□□□□□ -1.59
VTI1B-203ENST00000554636 ST7Q9NRC1 585 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 PRKAG3Q9UGI9 489 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 HDAC9Q9UKV0 1011 aa5.15□□□□□ -1.59
VTI1B-203ENST00000554636 SCAF8Q9UPN6 1271 aaKnown RBP5.15□□□□□ -1.59
VTI1B-203ENST00000554636 PA2G4Q9UQ80 394 aaKnown RBP5.15□□□□□ -1.59
VTI1B-203ENST00000554636 C7orf72A4D263 438 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 SRGAP3O43295 1099 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 SUSD5O60279 629 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 PPP1R11O60927 126 aaPredicted RBP5.14□□□□□ -1.59
VTI1B-203ENST00000554636 FUCA1P04066 466 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 ITGAVP06756 1048 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 MC3RP41968 323 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 ECI1P42126 302 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 CTCFP49711 727 aaPredicted RBP5.14□□□□□ -1.59
VTI1B-203ENST00000554636 MAP2K1Q02750 393 aaPredicted RBP5.14□□□□□ -1.59
VTI1B-203ENST00000554636 GRM1Q13255 1194 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 MTX1Q13505 466 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 PUM3Q15397 648 aaKnown RBP5.14□□□□□ -1.59
VTI1B-203ENST00000554636 CFAP100Q494V2 611 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 MFSD14BQ5SR56 506 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 LCE4AQ5TA78 99 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 PRAMEF18Q5VWM3 479 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 MRM1Q6IN84 353 aaKnown RBP5.14□□□□□ -1.59
VTI1B-203ENST00000554636 APOBEC3FQ8IUX4 373 aaKnown RBP5.14□□□□□ -1.59
VTI1B-203ENST00000554636 TMEM57Q8N5G2 664 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 PWWP2AQ96N64 755 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 MARCH2Q9P0N8 246 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 R3HCC1Q9Y3T6 440 aaKnown RBP5.14□□□□□ -1.59
VTI1B-203ENST00000554636 PCDHA5Q9Y5H7 936 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 OTOFQ9HC10 1997 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 LAMB1P07942 1786 aa5.14□□□□□ -1.59
VTI1B-203ENST00000554636 IPO8O15397 1037 aaKnown RBP5.13□□□□□ -1.59
VTI1B-203ENST00000554636 NPHS1O60500 1241 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 GJB6O95452 261 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 SNRPB2P08579 225 aaKnown RBP5.13□□□□□ -1.59
VTI1B-203ENST00000554636 GNAI3P08754 354 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 IFIT1P09914 478 aaKnown RBP5.13□□□□□ -1.59
VTI1B-203ENST00000554636 GLI4P10075 376 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 SLC5A1P13866 664 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 PFKLP17858 780 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 ADORA1P30542 326 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 MAP2K2P36507 400 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 KCNJ6P48051 423 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 ZNF143P52747 638 aaPredicted RBP5.13□□□□□ -1.59
VTI1B-203ENST00000554636 LBX1P52954 281 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 FKBP1BP68106 108 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 CHAF1AQ13111 956 aaPredicted RBP5.13□□□□□ -1.59
VTI1B-203ENST00000554636 NOGQ13253 232 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 DLGAP5Q15398 846 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 FXNQ16595 210 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 ZKSCAN2Q63HK3 967 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 RGMBQ6NW40 437 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 MOB2Q70IA6 237 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 ZNF227Q86WZ6 799 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 FAM129CQ86XR2 697 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 C2orf69Q8N8R5 385 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 LPIN2Q92539 896 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 ALG3Q92685 438 aa5.13□□□□□ -1.59
VTI1B-203ENST00000554636 PRMT6Q96LA8 375 aaPredicted RBP5.13□□□□□ -1.59
VTI1B-203ENST00000554636 MRGPRX3Q96LB0 322 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms