RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 CORO7P57737 925 aa16.99■□□□□ 0.31
ARHGEF40-203ENST00000554514 SETQ01105 290 aaPredicted RBP16.99■□□□□ 0.31
ARHGEF40-203ENST00000554514 PPP3CAQ08209 521 aa16.99■□□□□ 0.31
ARHGEF40-203ENST00000554514 CUL1Q13616 776 aa16.99■□□□□ 0.31
ARHGEF40-203ENST00000554514 LLGL1Q15334 1064 aa16.99■□□□□ 0.31
ARHGEF40-203ENST00000554514 RSBN1LQ6PCB5 846 aaPredicted RBP16.99■□□□□ 0.31
ARHGEF40-203ENST00000554514 MYCLP12524 364 aaPredicted RBP16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 EIF2AK2P19525 551 aaKnown RBP16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 SEC24CP53992 1094 aa16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 SKOR1P84550 965 aa16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 ODF2Q5BJF6 829 aa16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 CCDC26Q8TAB7 109 aa16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 C7orf43Q8WVR3 580 aa16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 ERVK-5Q9HDB9 667 aa16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 FAM169AQ9Y6X4 670 aa16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 ZHX2Q9Y6X8 837 aa16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 MYZAPP0CAP1 466 aa16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 LIG3P49916 1009 aa16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 GLG1Q92896 1179 aa16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 CALR3Q96L12 384 aaKnown RBP16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 AGPAT1Q99943 283 aa16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 INTUQ9ULD6 942 aa16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 UTP11Q9Y3A2 253 aaKnown RBP16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 CNTNAP1P78357 1384 aa16.98■□□□□ 0.31
ARHGEF40-203ENST00000554514 CCDC188H7C350 402 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 SLC16A4O15374 487 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 ANXA13P27216 316 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 VAMP7P51809 220 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 PPP2R5AQ15172 486 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 RPUSD2Q8IZ73 545 aaKnown RBP16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 KIFC3Q9BVG8 833 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 RAVER2Q9HCJ3 691 aaKnown RBP16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 LARSQ9P2J5 1176 aaKnown RBP16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 DDX3YO15523 660 aaKnown RBP16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 FTLP02792 175 aaPredicted RBP16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 GUCY2CP25092 1073 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 LSP1P33241 339 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 CAP2P40123 477 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 PEX3P56589 373 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 DHX9Q08211 1270 aaKnown RBP16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 ITGB3BPQ13352 177 aaPredicted RBP16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 KDM7AQ6ZMT4 941 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 MICALL1Q8N3F8 863 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 RASGEF1CQ8N431 466 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 CCDC127Q96BQ5 260 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 LRRC45Q96CN5 670 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 PPANQ9NQ55 473 aaKnown RBP16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 ATP8A1Q9Y2Q0 1164 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 PLSCR1O15162 318 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 CCDC172P0C7W6 258 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 BCRP11274 1271 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 MARCKSL1P49006 195 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 PLA2G4FQ68DD2 849 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 ALG3Q92685 438 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 LRRC4CQ9HCJ2 640 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 TCEAL9Q9UHQ7 104 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 FEM1BQ9UK73 627 aa16.97■□□□□ 0.31
ARHGEF40-203ENST00000554514 UBE4BO95155 1302 aa16.96■□□□□ 0.31
ARHGEF40-203ENST00000554514 MAGEA9P43362 315 aa16.96■□□□□ 0.31
ARHGEF40-203ENST00000554514 MAP2K1Q02750 393 aaPredicted RBP16.96■□□□□ 0.31
ARHGEF40-203ENST00000554514 MKRN4PQ13434 485 aaPredicted RBP16.96■□□□□ 0.31
ARHGEF40-203ENST00000554514 TNIP1Q15025 636 aa16.96■□□□□ 0.31
ARHGEF40-203ENST00000554514 FAM160B2Q86V87 743 aa16.96■□□□□ 0.31
ARHGEF40-203ENST00000554514 PPM1KQ8N3J5 372 aa16.96■□□□□ 0.31
ARHGEF40-203ENST00000554514 SAAL1Q96ER3 474 aa16.96■□□□□ 0.31
ARHGEF40-203ENST00000554514 TMBIM4Q9HC24 238 aa16.96■□□□□ 0.31
ARHGEF40-203ENST00000554514 HSPBP1Q9NZL4 362 aa16.96■□□□□ 0.31
ARHGEF40-203ENST00000554514 NCANO14594 1321 aa16.96■□□□□ 0.31
ARHGEF40-203ENST00000554514 P4HBP07237 508 aaKnown RBP16.96■□□□□ 0.3
ARHGEF40-203ENST00000554514 NPEPPSP55786 919 aa16.96■□□□□ 0.3
ARHGEF40-203ENST00000554514 PPATQ06203 517 aa16.96■□□□□ 0.3
ARHGEF40-203ENST00000554514 ZNF844Q08AG5 666 aa16.96■□□□□ 0.3
ARHGEF40-203ENST00000554514 MESDQ14696 234 aa16.96■□□□□ 0.3
ARHGEF40-203ENST00000554514 NFIL3Q16649 462 aa16.96■□□□□ 0.3
ARHGEF40-203ENST00000554514 UGCGQ16739 394 aa16.96■□□□□ 0.3
ARHGEF40-203ENST00000554514 FAM102BQ5T8I3 360 aa16.96■□□□□ 0.3
ARHGEF40-203ENST00000554514 LMO3Q8TAP4 145 aa16.96■□□□□ 0.3
ARHGEF40-203ENST00000554514 KRT35Q92764 455 aa16.96■□□□□ 0.3
ARHGEF40-203ENST00000554514 BTBD6Q96KE9 485 aa16.96■□□□□ 0.3
ARHGEF40-203ENST00000554514 ANKRD62A6NC57 917 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 CCDC169A6NNP5 214 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 BACH1O14867 736 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 SORBS3O60504 671 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 PPP1R37O75864 691 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 SGPL1O95470 568 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 RARRES1P49788 294 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 CETN1Q12798 172 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 SPP2Q13103 211 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 CPNE8Q86YQ8 564 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 PLEKHO2Q8TD55 490 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 FAM84AQ96KN4 292 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 ACCSQ96QU6 501 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 POP1Q99575 1024 aaKnown RBP16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 SYT11Q9BT88 431 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 KCND2Q9NZV8 630 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 ALG6Q9Y672 507 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 HMGB1P1B2RPK0 211 aaPredicted RBP16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 E7EVH7 732 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 TMOD1P28289 359 aa16.95■□□□□ 0.3
ARHGEF40-203ENST00000554514 DR1Q01658 176 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 495 ms