RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 SHC4Q6S5L8 630 aa17.83■□□□□ 0.44
ACTN1-209ENST00000553659 MICAL1Q8TDZ2 1067 aa17.83■□□□□ 0.44
ACTN1-209ENST00000553659 EDAQ92838 391 aa17.83■□□□□ 0.44
ACTN1-209ENST00000553659 MFSD14AQ96MC6 490 aa17.83■□□□□ 0.44
ACTN1-209ENST00000553659 TLE6Q9H808 572 aa17.83■□□□□ 0.44
ACTN1-209ENST00000553659 C6orf50Q9HD87 102 aa17.83■□□□□ 0.44
ACTN1-209ENST00000553659 KIAA1468Q9P260 1216 aa17.83■□□□□ 0.44
ACTN1-209ENST00000553659 USP25Q9UHP3 1055 aa17.83■□□□□ 0.44
ACTN1-209ENST00000553659 IGLV3-22A0A075B6J6 115 aa17.82■□□□□ 0.44
ACTN1-209ENST00000553659 TBKBP1A7MCY6 615 aa17.82■□□□□ 0.44
ACTN1-209ENST00000553659 IPO5O00410 1097 aaKnown RBP17.82■□□□□ 0.44
ACTN1-209ENST00000553659 GLP2RO95838 553 aa17.82■□□□□ 0.44
ACTN1-209ENST00000553659 ZNF165P49910 485 aa17.82■□□□□ 0.44
ACTN1-209ENST00000553659 CRYBB1P53674 252 aaPredicted RBP17.82■□□□□ 0.44
ACTN1-209ENST00000553659 FAM189BP81408 668 aa17.82■□□□□ 0.44
ACTN1-209ENST00000553659 NHLH1Q02575 133 aa17.82■□□□□ 0.44
ACTN1-209ENST00000553659 FAM102BQ5T8I3 360 aa17.82■□□□□ 0.44
ACTN1-209ENST00000553659 JAKMIP3Q5VZ66 844 aa17.82■□□□□ 0.44
ACTN1-209ENST00000553659 CRYGNQ8WXF5 182 aa17.82■□□□□ 0.44
ACTN1-209ENST00000553659 BBXQ8WY36 941 aaPredicted RBP17.82■□□□□ 0.44
ACTN1-209ENST00000553659 BPIFA3Q9BQP9 254 aa17.82■□□□□ 0.44
ACTN1-209ENST00000553659 KCNH3Q9ULD8 1083 aa17.82■□□□□ 0.44
ACTN1-209ENST00000553659 PCDHB6Q9Y5E3 794 aa17.82■□□□□ 0.44
ACTN1-209ENST00000553659 PCDHGC5Q9Y5F6 944 aa17.82■□□□□ 0.44
ACTN1-209ENST00000553659 MAFBQ9Y5Q3 323 aaPredicted RBP17.82■□□□□ 0.44
ACTN1-209ENST00000553659 CCDC194A0A1B0GVG4 234 aa17.81■□□□□ 0.44
ACTN1-209ENST00000553659 LOC730098B7Z3J9 87 aa17.81■□□□□ 0.44
ACTN1-209ENST00000553659 GOLGA6L19H0YKK7 550 aa17.81■□□□□ 0.44
ACTN1-209ENST00000553659 LAD1O00515 517 aa17.81■□□□□ 0.44
ACTN1-209ENST00000553659 TPM3P06753 285 aa17.81■□□□□ 0.44
ACTN1-209ENST00000553659 ARL6IP4Q66PJ3 421 aaKnown RBP17.81■□□□□ 0.44
ACTN1-209ENST00000553659 MCTP2Q6DN12 878 aa17.81■□□□□ 0.44
ACTN1-209ENST00000553659 PDE12Q6L8Q7 609 aaKnown RBP17.81■□□□□ 0.44
ACTN1-209ENST00000553659 KRT25Q7Z3Z0 450 aa17.81■□□□□ 0.44
ACTN1-209ENST00000553659 BMP8AQ7Z5Y6 402 aa17.81■□□□□ 0.44
ACTN1-209ENST00000553659 ZNF577Q9BSK1 485 aa17.81■□□□□ 0.44
ACTN1-209ENST00000553659 ZMYND12Q9H0C1 365 aa17.81■□□□□ 0.44
ACTN1-209ENST00000553659 ELAC1Q9H777 363 aaKnown RBP17.81■□□□□ 0.44
ACTN1-209ENST00000553659 CBX8Q9HC52 389 aa17.81■□□□□ 0.44
ACTN1-209ENST00000553659 TLR9Q9NR96 1032 aa17.81■□□□□ 0.44
ACTN1-209ENST00000553659 TBC1D22BQ9NU19 505 aa17.81■□□□□ 0.44
ACTN1-209ENST00000553659 TYW1Q9NV66 732 aaKnown RBP17.81■□□□□ 0.44
ACTN1-209ENST00000553659 TMEM161AQ9NX61 479 aa17.81■□□□□ 0.44
ACTN1-209ENST00000553659 BARX2Q9UMQ3 279 aaPredicted RBP17.81■□□□□ 0.44
ACTN1-209ENST00000553659 PER2O15055 1255 aa17.8■□□□□ 0.44
ACTN1-209ENST00000553659 GPR32O75388 356 aa17.8■□□□□ 0.44
ACTN1-209ENST00000553659 FGF18O76093 207 aa17.8■□□□□ 0.44
ACTN1-209ENST00000553659 C22orf31O95567 290 aa17.8■□□□□ 0.44
ACTN1-209ENST00000553659 ATP2C1P98194 919 aaPredicted RBP17.8■□□□□ 0.44
ACTN1-209ENST00000553659 KIZQ2M2Z5 673 aa17.8■□□□□ 0.44
ACTN1-209ENST00000553659 ZNF746Q6NUN9 644 aaPredicted RBP17.8■□□□□ 0.44
ACTN1-209ENST00000553659 KRBA2Q6ZNG9 492 aa17.8■□□□□ 0.44
ACTN1-209ENST00000553659 FAM228AQ86W67 206 aa17.8■□□□□ 0.44
ACTN1-209ENST00000553659 THNSL1Q8IYQ7 743 aa17.8■□□□□ 0.44
ACTN1-209ENST00000553659 COLGALT1Q8NBJ5 622 aa17.8■□□□□ 0.44
ACTN1-209ENST00000553659 CNNM3Q8NE01 707 aa17.8■□□□□ 0.44
ACTN1-209ENST00000553659 CDCA3Q99618 268 aaPredicted RBP17.8■□□□□ 0.44
ACTN1-209ENST00000553659 OSMRQ99650 979 aa17.8■□□□□ 0.44
ACTN1-209ENST00000553659 ATP6V0A4Q9HBG4 840 aa17.8■□□□□ 0.44
ACTN1-209ENST00000553659 USP15Q9Y4E8 981 aaPredicted RBP17.8■□□□□ 0.44
ACTN1-209ENST00000553659 GOLGA6L6A8MZA4 724 aa17.79■□□□□ 0.44
ACTN1-209ENST00000553659 PSAPP07602 524 aa17.79■□□□□ 0.44
ACTN1-209ENST00000553659 NLRP12P59046 1061 aa17.79■□□□□ 0.44
ACTN1-209ENST00000553659 ERVFC1P60507 584 aa17.79■□□□□ 0.44
ACTN1-209ENST00000553659 TPM4P67936 248 aa17.79■□□□□ 0.44
ACTN1-209ENST00000553659 SETQ01105 290 aaPredicted RBP17.79■□□□□ 0.44
ACTN1-209ENST00000553659 DSC3Q14574 896 aa17.79■□□□□ 0.44
ACTN1-209ENST00000553659 CBX2Q14781 532 aaPredicted RBP17.79■□□□□ 0.44
ACTN1-209ENST00000553659 DUSP6Q16828 381 aa17.79■□□□□ 0.44
ACTN1-209ENST00000553659 PIK3AP1Q6ZUJ8 805 aa17.79■□□□□ 0.44
ACTN1-209ENST00000553659 SMAP1Q8IYB5 467 aaPredicted RBP17.79■□□□□ 0.44
ACTN1-209ENST00000553659 METTL13Q8N6R0 699 aa17.79■□□□□ 0.44
ACTN1-209ENST00000553659 PPP1R16BQ96T49 567 aa17.79■□□□□ 0.44
ACTN1-209ENST00000553659 PHF7Q9BWX1 381 aaPredicted RBP17.79■□□□□ 0.44
ACTN1-209ENST00000553659 DNAJC25Q9H1X3 360 aa17.79■□□□□ 0.44
ACTN1-209ENST00000553659 CWH43Q9H720 699 aa17.79■□□□□ 0.44
ACTN1-209ENST00000553659 PCDHA10Q9Y5I2 948 aa17.79■□□□□ 0.44
ACTN1-209ENST00000553659 PIEZO1Q92508 2521 aa17.79■□□□□ 0.44
ACTN1-209ENST00000553659 BECN2A8MW95 431 aa17.78■□□□□ 0.44
ACTN1-209ENST00000553659 M0R2N6 131 aa17.78■□□□□ 0.44
ACTN1-209ENST00000553659 FSCN2O14926 492 aa17.78■□□□□ 0.44
ACTN1-209ENST00000553659 MAGEB2O15479 319 aa17.78■□□□□ 0.44
ACTN1-209ENST00000553659 ADCY5O95622 1261 aa17.78■□□□□ 0.44
ACTN1-209ENST00000553659 VTNP04004 478 aa17.78■□□□□ 0.44
ACTN1-209ENST00000553659 FGFR1P11362 822 aa17.78■□□□□ 0.44
ACTN1-209ENST00000553659 ATF7P17544 494 aaPredicted RBP17.78■□□□□ 0.44
ACTN1-209ENST00000553659 LAG3P18627 525 aa17.78■□□□□ 0.44
ACTN1-209ENST00000553659 TRIM67Q6ZTA4 783 aa17.78■□□□□ 0.44
ACTN1-209ENST00000553659 TRMT1LQ7Z2T5 733 aaKnown RBP17.78■□□□□ 0.44
ACTN1-209ENST00000553659 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.78■□□□□ 0.44
ACTN1-209ENST00000553659 CLIC6Q96NY7 704 aa17.78■□□□□ 0.44
ACTN1-209ENST00000553659 HCSTQ9UBK5 93 aa17.78■□□□□ 0.44
ACTN1-209ENST00000553659 LZTS1Q9Y250 596 aa17.78■□□□□ 0.44
ACTN1-209ENST00000553659 TMEM221A6NGB7 291 aa17.77■□□□□ 0.44
ACTN1-209ENST00000553659 ESPNB1AK53 854 aa17.77■□□□□ 0.44
ACTN1-209ENST00000553659 M0R296 226 aa17.77■□□□□ 0.44
ACTN1-209ENST00000553659 ADAMTS3O15072 1205 aa17.77■□□□□ 0.44
ACTN1-209ENST00000553659 PTMAP06454 111 aaKnown RBP17.77■□□□□ 0.44
ACTN1-209ENST00000553659 ATP2B1P20020 1258 aa17.77■□□□□ 0.44
ACTN1-209ENST00000553659 ZXDAP98168 799 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms