RNA–Protein interactions for RNA: ENST00000552017.1

CBX3P5-201, Transcript of chromobox 3 pseudogene 5, humanhuman

BASIC

Gene CBX3P5, Length 521 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P5-201ENST00000552017 FOXRED1Q96CU9 486 aaPredicted RBP4.85□□□□□ -1.63
CBX3P5-201ENST00000552017 NCOA5Q9HCD5 579 aaKnown RBP4.85□□□□□ -1.63
CBX3P5-201ENST00000552017 MSL2Q9HCI7 577 aa4.85□□□□□ -1.63
CBX3P5-201ENST00000552017 TLR9Q9NR96 1032 aa4.85□□□□□ -1.63
CBX3P5-201ENST00000552017 PLA2G3Q9NZ20 509 aa4.85□□□□□ -1.63
CBX3P5-201ENST00000552017 FAM184BQ9ULE4 1060 aa4.85□□□□□ -1.63
CBX3P5-201ENST00000552017 IPO8O15397 1037 aaKnown RBP4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 SLC26A4O43511 780 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 NARSO43776 548 aaKnown RBP4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 HIP1RO75146 1068 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 MAFO75444 373 aaPredicted RBP4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 APEX1P27695 318 aaKnown RBP4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 MECP2P51608 486 aaKnown RBP4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 SARNPP82979 210 aaKnown RBP4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 ALDH6A1Q02252 535 aaKnown RBP4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 SAFB2Q14151 953 aaKnown RBP eCLIP4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 FHL2Q14192 279 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 DCTN1Q14203 1278 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 CCDC174Q6PII3 467 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 OTUD6AQ7L8S5 288 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 OTOP1Q7RTM1 612 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 DRC7Q8IY82 874 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 C2orf69Q8N8R5 385 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 CACTINQ8WUQ7 758 aaKnown RBP4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 PMM1Q92871 262 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 EVI5LQ96CN4 794 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 TMEM176AQ96HP8 235 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 POLR3CQ9BUI4 534 aaPredicted RBP4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 MENTQ9BUN1 341 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 CSRNP2Q9H175 543 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 SMC4Q9NTJ3 1288 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 ODF2LQ9ULJ1 636 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 SCINQ9Y6U3 715 aa4.84□□□□□ -1.63
CBX3P5-201ENST00000552017 RAD54L2Q9Y4B4 1467 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 KLHL33A6NCF5 533 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 VGLL3A8MV65 326 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 OVOL3O00110 214 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 NPHP1O15259 732 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 KIF5CO60282 957 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 KRT37O76014 449 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 TPM3P06753 285 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 STAT3P40763 770 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 GYS2P54840 703 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 ABHD18Q0P651 414 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 ADAM15Q13444 863 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 RIN1Q13671 783 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 BMS1Q14692 1282 aaKnown RBP4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 GRM7Q14831 915 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 LSM12Q3MHD2 195 aaKnown RBP4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 CRB2Q5IJ48 1285 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 LCA5Q86VQ0 697 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 LILRB2Q8N423 598 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 SHCBP1Q8NEM2 672 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 CALML6Q8TD86 181 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 FOXB1Q99853 325 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 NCAPGQ9BPX3 1015 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 BOCQ9BWV1 1114 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 SLITRK6Q9H5Y7 841 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 MAGEL2Q9UJ55 1249 aa4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 CTDP1Q9Y5B0 961 aaPredicted RBP4.83□□□□□ -1.64
CBX3P5-201ENST00000552017 CFAP69A5D8W1 941 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 PES1O00541 588 aaKnown RBP4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 DVL2O14641 736 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 CCP110O43303 1012 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 GLRX3O76003 335 aaKnown RBP4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 NPTXRO95502 500 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 PRLP01236 227 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 TMED1Q13445 227 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 ACAP1Q15027 740 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 SOGA3Q5TF21 947 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 CC2D1AQ6P1N0 951 aaPredicted RBP4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 D2HGDHQ8N465 521 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 OR5AN1Q8NGI8 311 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 OSBPL2Q9H1P3 480 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 NELFAQ9H3P2 528 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 IFT122Q9HBG6 1241 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 MED4Q9NPJ6 270 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 DONSONQ9NYP3 566 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 KLHL42Q9P2K6 505 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 PAXBP1Q9Y5B6 917 aa4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 CFAP65Q6ZU64 1925 aaKnown RBP4.82□□□□□ -1.64
CBX3P5-201ENST00000552017 KIF16BQ96L93 1317 aa4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 CCDC163A0A0D9SF12 145 aa4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 CAPN14A8MX76 684 aa4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 M0R2C6 588 aa4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 RAPGEF3O95398 923 aa4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 HIBADHP31937 336 aaKnown RBP4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 ATICP31939 592 aa4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 FNTBP49356 437 aa4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 NAP1L1P55209 391 aaKnown RBP4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 MAP3K12Q12852 859 aa4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 BIRC2Q13490 618 aa4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 FILIP1LQ4L180 1135 aa4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 FNDC7Q5VTL7 733 aa4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 GIMAP6Q6P9H5 292 aa4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 SAMD3Q8N6K7 520 aa4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 VPS37AQ8NEZ2 397 aa4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 CLUHP3Q96NS8 147 aa4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 PLEKHG4BQ96PX9 1271 aa4.81□□□□□ -1.64
CBX3P5-201ENST00000552017 PAGR1Q9BTK6 254 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms