RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 FAM126AQ9BYI3 521 aaPredicted RBP11.71□□□□□ -0.53
SLC48A1-209ENST00000552003 FAM217BQ9NTX9 383 aaPredicted RBP11.71□□□□□ -0.53
SLC48A1-209ENST00000552003 ASXL3Q9C0F0 2248 aa11.71□□□□□ -0.54
SLC48A1-209ENST00000552003 SPAG17Q6Q759 2223 aa11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 A0A0D9SFI3 127 aa11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 A0A0U1RQF3 1178 aa11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 PALM3A6NDB9 673 aaPredicted RBP11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 TEX28O15482 410 aa11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 FGFR4P22455 802 aa11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 MAGEA9P43362 315 aa11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 BMS1Q14692 1282 aaKnown RBP11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 LONRF3Q496Y0 759 aa11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 POTEHQ6S545 545 aa11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 PLPPR4Q7Z2D5 763 aa11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 NLRX1Q86UT6 975 aa11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 ZNF280BQ86YH2 543 aa11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 LPPQ93052 612 aa11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 ZNF668Q96K58 619 aaPredicted RBP11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 ZSCAN10Q96SZ4 725 aaPredicted RBP11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 NT5C3AQ9H0P0 336 aa11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 RIOX1Q9H6W3 641 aa11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 TBC1D13Q9NVG8 400 aa11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 UBIAD1Q9Y5Z9 338 aa11.7□□□□□ -0.54
SLC48A1-209ENST00000552003 ZMYM6O95789 1325 aa11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 C2CD2LO14523 706 aa11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 ATP4AP20648 1035 aa11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 STAT5BP51692 787 aa11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 AFF1P51825 1210 aaKnown RBP11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 ACTR2P61160 394 aa11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 NTHL1P78549 312 aa11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 SIM2Q14190 667 aaPredicted RBP11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 PSAPL1Q6NUJ1 521 aa11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 TPRG1Q6ZUI0 275 aa11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 SPDYE1Q8NFV5 336 aaPredicted RBP11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 ESR2Q92731 530 aa11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 BBC3Q96PG8 261 aaPredicted RBP11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 LSM14BQ9BX40 385 aaKnown RBP11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 EMILIN2Q9BXX0 1053 aa11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 ADAMTS10Q9H324 1103 aa11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 ZSWIM5Q9P217 1185 aa11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 RAB23Q9ULC3 237 aa11.69□□□□□ -0.54
SLC48A1-209ENST00000552003 IGKV6D-21A0A0A0MT36 114 aa11.68□□□□□ -0.54
SLC48A1-209ENST00000552003 B4E1Z4 1266 aa11.68□□□□□ -0.54
SLC48A1-209ENST00000552003 DDHD2O94830 711 aa11.68□□□□□ -0.54
SLC48A1-209ENST00000552003 C22orf31O95567 290 aa11.68□□□□□ -0.54
SLC48A1-209ENST00000552003 EFEMP2O95967 443 aa11.68□□□□□ -0.54
SLC48A1-209ENST00000552003 FOXC1Q12948 553 aa11.68□□□□□ -0.54
SLC48A1-209ENST00000552003 GAS6Q14393 721 aa11.68□□□□□ -0.54
SLC48A1-209ENST00000552003 ODR4Q5SWX8 454 aa11.68□□□□□ -0.54
SLC48A1-209ENST00000552003 STPG1Q5TH74 334 aa11.68□□□□□ -0.54
SLC48A1-209ENST00000552003 RSPO2Q6UXX9 243 aaPredicted RBP11.68□□□□□ -0.54
SLC48A1-209ENST00000552003 CYP26C1Q6V0L0 522 aa11.68□□□□□ -0.54
SLC48A1-209ENST00000552003 MRPL9Q9BYD2 267 aaKnown RBP11.68□□□□□ -0.54
SLC48A1-209ENST00000552003 ADAM33Q9BZ11 813 aa11.68□□□□□ -0.54
SLC48A1-209ENST00000552003 JPH1Q9HDC5 661 aaPredicted RBP11.68□□□□□ -0.54
SLC48A1-209ENST00000552003 ZBTB47Q9UFB7 747 aaPredicted RBP11.68□□□□□ -0.54
SLC48A1-209ENST00000552003 TENM4Q6N022 2769 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 CHURC1-FNTBB4DL54 471 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 CSDE1O75534 798 aaKnown RBP11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 ATG7O95352 703 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 MS4A1P11836 297 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 FNTBP49356 437 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 SATB1Q01826 763 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 ITGB3BPQ13352 177 aaPredicted RBP11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 MTMR1Q13613 665 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 AASDHQ4L235 1098 aaPredicted RBP11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 MAMSTRQ6ZN01 415 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 FAM160A2Q8N612 972 aaPredicted RBP11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 ZCCHC14Q8WYQ9 949 aaKnown RBP11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 GPATCH3Q96I76 525 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 RPS6KC1Q96S38 1066 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 KXD1Q9BQD3 176 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 PLA2G2FQ9BZM2 168 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 GBP3Q9H0R5 595 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 CHRDQ9H2X0 955 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 SMOC1Q9H4F8 434 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 AZI2Q9H6S1 392 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 JADE2Q9NQC1 790 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 HEBP1Q9NRV9 189 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 SLC9A2Q9UBY0 812 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 CACNA1EQ15878 2313 aa11.67□□□□□ -0.54
SLC48A1-209ENST00000552003 TICRRQ7Z2Z1 1910 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 COL4A2P08572 1712 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 TTC41PQ6P2S7 1318 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 PNMA6FA0A0J9YX94 578 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 OFD1O75665 1012 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 CCNE2O96020 404 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 PCP11498 1178 aaKnown RBP11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 ZSCAN20P17040 1043 aaPredicted RBP11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 NLRP11P59045 1033 aaKnown RBP11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 ADCY1Q08828 1119 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 SEC23AQ15436 765 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 LINC01465Q8N7H1 131 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 PIBF1Q8WXW3 757 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 SCNM1Q9BWG6 230 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 PRKD2Q9BZL6 878 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 DCTPP1Q9H773 170 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 RXFP1Q9HBX9 757 aa11.66□□□□□ -0.54
SLC48A1-209ENST00000552003 SENP2Q9HC62 589 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms