RNA–Protein interactions for RNA: ENST00000551912.1

DDX54-209, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-209ENST00000551912 LRRC27Q9C0I9 530 aa20.62■□□□□ 0.89
DDX54-209ENST00000551912 TSPYL2Q9H2G4 693 aaPredicted RBP20.62■□□□□ 0.89
DDX54-209ENST00000551912 TNMDQ9H2S6 317 aa20.62■□□□□ 0.89
DDX54-209ENST00000551912 MAGEF1Q9HAY2 307 aa20.62■□□□□ 0.89
DDX54-209ENST00000551912 LARSQ9P2J5 1176 aaKnown RBP20.62■□□□□ 0.89
DDX54-209ENST00000551912 FAM237AA0A1B0GTK4 181 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 MYMKA6NI61 221 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 MGEA5O60502 916 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 ERLIN2O94905 339 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 FAM13AO94988 1023 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 ATP2A2P16615 1042 aaKnown RBP20.61■□□□□ 0.89
DDX54-209ENST00000551912 ZSCAN20P17040 1043 aaPredicted RBP20.61■□□□□ 0.89
DDX54-209ENST00000551912 NPTX2P47972 431 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 DEFB103AP81534 67 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 AMPD3Q01432 767 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 MBTD1Q05BQ5 628 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 DYMQ7RTS9 669 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 RTN4RL1Q86UN2 441 aaPredicted RBP20.61■□□□□ 0.89
DDX54-209ENST00000551912 CEP57L1Q8IYX8 460 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 MYOCDQ8IZQ8 938 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 LINC01599Q8WXQ3 324 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 DDX12PQ92771 950 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 ADAM2Q99965 735 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 KIFC3Q9BVG8 833 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 KMT5AQ9NQR1 393 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 KBTBD4Q9NVX7 518 aa20.61■□□□□ 0.89
DDX54-209ENST00000551912 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.6■□□□□ 0.89
DDX54-209ENST00000551912 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.6■□□□□ 0.89
DDX54-209ENST00000551912 SYKP43405 635 aa20.6■□□□□ 0.89
DDX54-209ENST00000551912 NDUFA8P51970 172 aa20.6■□□□□ 0.89
DDX54-209ENST00000551912 ZNF131P52739 623 aa20.6■□□□□ 0.89
DDX54-209ENST00000551912 EFNA5P52803 228 aa20.6■□□□□ 0.89
DDX54-209ENST00000551912 SMTNP53814 917 aa20.6■□□□□ 0.89
DDX54-209ENST00000551912 NCBP1Q09161 790 aaKnown RBP20.6■□□□□ 0.89
DDX54-209ENST00000551912 DSC3Q14574 896 aa20.6■□□□□ 0.89
DDX54-209ENST00000551912 SPIRE2Q8WWL2 714 aa20.6■□□□□ 0.89
DDX54-209ENST00000551912 STAMQ92783 540 aa20.6■□□□□ 0.89
DDX54-209ENST00000551912 ZHX3Q9H4I2 956 aa20.6■□□□□ 0.89
DDX54-209ENST00000551912 PARVGQ9HBI0 331 aa20.6■□□□□ 0.89
DDX54-209ENST00000551912 CHST12Q9NRB3 414 aa20.6■□□□□ 0.89
DDX54-209ENST00000551912 RGS18Q9NS28 235 aa20.6■□□□□ 0.89
DDX54-209ENST00000551912 C1orf112Q9NSG2 853 aa20.6■□□□□ 0.89
DDX54-209ENST00000551912 AGPAT5Q9NUQ2 364 aa20.6■□□□□ 0.89
DDX54-209ENST00000551912 USP25Q9UHP3 1055 aa20.6■□□□□ 0.89
DDX54-209ENST00000551912 PIN4Q9Y237 131 aaKnown RBP20.6■□□□□ 0.89
DDX54-209ENST00000551912 ADGRA3Q8IWK6 1321 aa20.59■□□□□ 0.89
DDX54-209ENST00000551912 SLFN14P0C7P3 912 aa20.59■□□□□ 0.89
DDX54-209ENST00000551912 MAPK6Q16659 721 aa20.59■□□□□ 0.89
DDX54-209ENST00000551912 HABP4Q5JVS0 413 aaKnown RBP20.59■□□□□ 0.89
DDX54-209ENST00000551912 SLC24A5Q71RS6 500 aa20.59■□□□□ 0.89
DDX54-209ENST00000551912 MYCT1Q8N699 235 aa20.59■□□□□ 0.89
DDX54-209ENST00000551912 NTPCRQ9BSD7 190 aaKnown RBP20.59■□□□□ 0.89
DDX54-209ENST00000551912 GOLPH3LQ9H4A5 285 aa20.59■□□□□ 0.89
DDX54-209ENST00000551912 PRMT7Q9NVM4 692 aaPredicted RBP20.59■□□□□ 0.89
DDX54-209ENST00000551912 DACT1Q9NYF0 836 aa20.59■□□□□ 0.89
DDX54-209ENST00000551912 SERTAD1Q9UHV2 236 aa20.59■□□□□ 0.89
DDX54-209ENST00000551912 MYH11P35749 1972 aa20.59■□□□□ 0.89
DDX54-209ENST00000551912 PHLPP2Q6ZVD8 1323 aa20.58■□□□□ 0.89
DDX54-209ENST00000551912 ACTN4O43707 911 aaKnown RBP20.58■□□□□ 0.89
DDX54-209ENST00000551912 TSPAN1O60635 241 aa20.58■□□□□ 0.89
DDX54-209ENST00000551912 AXLP30530 894 aa20.58■□□□□ 0.89
DDX54-209ENST00000551912 FAM187BQ17R55 369 aa20.58■□□□□ 0.89
DDX54-209ENST00000551912 FAM109BQ6ICB4 259 aaPredicted RBP20.58■□□□□ 0.89
DDX54-209ENST00000551912 PPP4R3CPQ6ZMV5 832 aa20.58■□□□□ 0.89
DDX54-209ENST00000551912 HERC6Q8IVU3 1022 aa20.58■□□□□ 0.89
DDX54-209ENST00000551912 TMEM87AQ8NBN3 555 aa20.58■□□□□ 0.89
DDX54-209ENST00000551912 TOP1MTQ969P6 601 aa20.58■□□□□ 0.89
DDX54-209ENST00000551912 DNAJC19Q96DA6 116 aa20.58■□□□□ 0.89
DDX54-209ENST00000551912 PRIMPOLQ96LW4 560 aa20.58■□□□□ 0.89
DDX54-209ENST00000551912 CCDC113Q9H0I3 377 aa20.58■□□□□ 0.89
DDX54-209ENST00000551912 FZD8Q9H461 694 aa20.58■□□□□ 0.89
DDX54-209ENST00000551912 ARHGAP28Q9P2N2 729 aa20.58■□□□□ 0.89
DDX54-209ENST00000551912 GRXCR1A8MXD5 290 aa20.57■□□□□ 0.88
DDX54-209ENST00000551912 H0YCG3 227 aa20.57■□□□□ 0.88
DDX54-209ENST00000551912 K7ERI5 159 aa20.57■□□□□ 0.88
DDX54-209ENST00000551912 SLC16A4O15374 487 aa20.57■□□□□ 0.88
DDX54-209ENST00000551912 UPP2O95045 317 aa20.57■□□□□ 0.88
DDX54-209ENST00000551912 PRKCBP05771 671 aa20.57■□□□□ 0.88
DDX54-209ENST00000551912 IDEP14735 1019 aa20.57■□□□□ 0.88
DDX54-209ENST00000551912 HOXA11P31270 313 aaPredicted RBP20.57■□□□□ 0.88
DDX54-209ENST00000551912 SARSP49591 514 aaKnown RBP20.57■□□□□ 0.88
DDX54-209ENST00000551912 SMAD3P84022 425 aaKnown RBP20.57■□□□□ 0.88
DDX54-209ENST00000551912 AMHR2Q16671 573 aa20.57■□□□□ 0.88
DDX54-209ENST00000551912 LONRF3Q496Y0 759 aa20.57■□□□□ 0.88
DDX54-209ENST00000551912 TWF2Q6IBS0 349 aaKnown RBP20.57■□□□□ 0.88
DDX54-209ENST00000551912 TMCO2Q7Z6W1 182 aaPredicted RBP20.57■□□□□ 0.88
DDX54-209ENST00000551912 ZBED2Q9BTP6 218 aa20.57■□□□□ 0.88
DDX54-209ENST00000551912 TRIM9Q9C026 710 aa20.57■□□□□ 0.88
DDX54-209ENST00000551912 TMEM134Q9H6X4 195 aa20.57■□□□□ 0.88
DDX54-209ENST00000551912 RNF216Q9NWF9 866 aaPredicted RBP20.57■□□□□ 0.88
DDX54-209ENST00000551912 C9IYK1 514 aa20.56■□□□□ 0.88
DDX54-209ENST00000551912 ACKR2O00590 384 aa20.56■□□□□ 0.88
DDX54-209ENST00000551912 TRAK2O60296 914 aa20.56■□□□□ 0.88
DDX54-209ENST00000551912 GJB5O95377 273 aa20.56■□□□□ 0.88
DDX54-209ENST00000551912 GAP43P17677 238 aa20.56■□□□□ 0.88
DDX54-209ENST00000551912 LIG1P18858 919 aa20.56■□□□□ 0.88
DDX54-209ENST00000551912 AFMP43652 599 aa20.56■□□□□ 0.88
DDX54-209ENST00000551912 PRPF4BQ13523 1007 aaKnown RBP20.56■□□□□ 0.88
DDX54-209ENST00000551912 NOTUMQ6P988 496 aa20.56■□□□□ 0.88
DDX54-209ENST00000551912 FAM178BQ8IXR5 827 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms