RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 DACT1Q9NYF0 836 aa21.41■■□□□ 1.02
DDX54-207ENST00000550016 YBX2Q9Y2T7 364 aaKnown RBP21.41■■□□□ 1.02
DDX54-207ENST00000550016 A0A087X0B3 334 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 ERLIN2O94905 339 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 STAG3L1P0CL83 205 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 MYOGP15173 224 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 FAM189BP81408 668 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 MBTD1Q05BQ5 628 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 RAD51AP2Q09MP3 1159 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 NAALADL2Q58DX5 795 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 RESP18Q5W5W9 173 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 CDCA2Q69YH5 1023 aaPredicted RBP21.4■■□□□ 1.02
DDX54-207ENST00000550016 NPAS4Q8IUM7 802 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 PDILTQ8N807 584 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 DEPTORQ8TB45 409 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 TIFAQ96CG3 184 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 C2orf40Q9H1Z8 148 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 AGPAT5Q9NUQ2 364 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 FAM13BQ9NYF5 915 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 PIN4Q9Y237 131 aaKnown RBP21.4■■□□□ 1.02
DDX54-207ENST00000550016 INSL6Q9Y581 213 aa21.4■■□□□ 1.02
DDX54-207ENST00000550016 NPHP3-ACAD11A0A0J9YXS1 232 aa21.39■■□□□ 1.01
DDX54-207ENST00000550016 AXLP30530 894 aa21.39■■□□□ 1.01
DDX54-207ENST00000550016 PEX3P56589 373 aa21.39■■□□□ 1.01
DDX54-207ENST00000550016 HTRA4P83105 476 aaPredicted RBP21.39■■□□□ 1.01
DDX54-207ENST00000550016 NCBP1Q09161 790 aaKnown RBP21.39■■□□□ 1.01
DDX54-207ENST00000550016 SV2BQ7L1I2 683 aa21.39■■□□□ 1.01
DDX54-207ENST00000550016 CRIPAKQ8N1N5 446 aa21.39■■□□□ 1.01
DDX54-207ENST00000550016 NKX2-4Q9H2Z4 354 aa21.39■■□□□ 1.01
DDX54-207ENST00000550016 KCNG1Q9UIX4 513 aa21.39■■□□□ 1.01
DDX54-207ENST00000550016 LRFN2Q9ULH4 789 aa21.39■■□□□ 1.01
DDX54-207ENST00000550016 ODF2LQ9ULJ1 636 aa21.39■■□□□ 1.01
DDX54-207ENST00000550016 PCDHB7Q9Y5E2 793 aa21.39■■□□□ 1.01
DDX54-207ENST00000550016 NLRC5Q86WI3 1866 aa21.39■■□□□ 1.01
DDX54-207ENST00000550016 LAMA3Q16787 3333 aa21.39■■□□□ 1.01
DDX54-207ENST00000550016 TMEM265A0A087WTH1 108 aa21.38■■□□□ 1.01
DDX54-207ENST00000550016 SFI1A8K8P3 1242 aa21.38■■□□□ 1.01
DDX54-207ENST00000550016 KRT18P05783 430 aaKnown RBP21.38■■□□□ 1.01
DDX54-207ENST00000550016 NPTX2P47972 431 aa21.38■■□□□ 1.01
DDX54-207ENST00000550016 EFNA5P52803 228 aa21.38■■□□□ 1.01
DDX54-207ENST00000550016 DMP1Q13316 513 aaPredicted RBP21.38■■□□□ 1.01
DDX54-207ENST00000550016 ADALQ6DHV7 355 aa21.38■■□□□ 1.01
DDX54-207ENST00000550016 TWF2Q6IBS0 349 aaKnown RBP21.38■■□□□ 1.01
DDX54-207ENST00000550016 TRAIPQ9BWF2 469 aa21.38■■□□□ 1.01
DDX54-207ENST00000550016 RBM19Q9Y4C8 960 aaKnown RBP21.38■■□□□ 1.01
DDX54-207ENST00000550016 CCDC169A6NNP5 214 aa21.37■■□□□ 1.01
DDX54-207ENST00000550016 TSPAN1O60635 241 aa21.37■■□□□ 1.01
DDX54-207ENST00000550016 PLS3P13797 630 aa21.37■■□□□ 1.01
DDX54-207ENST00000550016 HOXA11P31270 313 aaPredicted RBP21.37■■□□□ 1.01
DDX54-207ENST00000550016 GIT2Q14161 759 aa21.37■■□□□ 1.01
DDX54-207ENST00000550016 E2F4Q16254 413 aa21.37■■□□□ 1.01
DDX54-207ENST00000550016 AMHR2Q16671 573 aa21.37■■□□□ 1.01
DDX54-207ENST00000550016 FAM187BQ17R55 369 aa21.37■■□□□ 1.01
DDX54-207ENST00000550016 ECHDC2Q86YB7 292 aa21.37■■□□□ 1.01
DDX54-207ENST00000550016 IQUBQ8NA54 791 aa21.37■■□□□ 1.01
DDX54-207ENST00000550016 YME1L1Q96TA2 773 aa21.37■■□□□ 1.01
DDX54-207ENST00000550016 REEP2Q9BRK0 252 aa21.37■■□□□ 1.01
DDX54-207ENST00000550016 NTPCRQ9BSD7 190 aaKnown RBP21.37■■□□□ 1.01
DDX54-207ENST00000550016 FZD8Q9H461 694 aa21.37■■□□□ 1.01
DDX54-207ENST00000550016 CUEDC2Q9H467 287 aa21.37■■□□□ 1.01
DDX54-207ENST00000550016 ELAC1Q9H777 363 aaKnown RBP21.37■■□□□ 1.01
DDX54-207ENST00000550016 SLC28A3Q9HAS3 691 aa21.37■■□□□ 1.01
DDX54-207ENST00000550016 KMT5AQ9NQR1 393 aa21.37■■□□□ 1.01
DDX54-207ENST00000550016 PRMT7Q9NVM4 692 aaPredicted RBP21.37■■□□□ 1.01
DDX54-207ENST00000550016 CHMP5Q9NZZ3 219 aa21.37■■□□□ 1.01
DDX54-207ENST00000550016 A0A0U1RQF3 1178 aa21.36■■□□□ 1.01
DDX54-207ENST00000550016 DGKIO75912 1065 aa21.36■■□□□ 1.01
DDX54-207ENST00000550016 CA3P07451 260 aa21.36■■□□□ 1.01
DDX54-207ENST00000550016 SKIP12755 728 aa21.36■■□□□ 1.01
DDX54-207ENST00000550016 IBSPP21815 317 aaPredicted RBP21.36■■□□□ 1.01
DDX54-207ENST00000550016 CMA1P23946 247 aa21.36■■□□□ 1.01
DDX54-207ENST00000550016 CACNB1Q02641 598 aaPredicted RBP21.36■■□□□ 1.01
DDX54-207ENST00000550016 MAPK6Q16659 721 aa21.36■■□□□ 1.01
DDX54-207ENST00000550016 ZNF697Q5TEC3 545 aa21.36■■□□□ 1.01
DDX54-207ENST00000550016 PPP4R3CPQ6ZMV5 832 aa21.36■■□□□ 1.01
DDX54-207ENST00000550016 SPIRE2Q8WWL2 714 aa21.36■■□□□ 1.01
DDX54-207ENST00000550016 DHX58Q96C10 678 aa21.36■■□□□ 1.01
DDX54-207ENST00000550016 PRIMPOLQ96LW4 560 aa21.36■■□□□ 1.01
DDX54-207ENST00000550016 CCDC113Q9H0I3 377 aa21.36■■□□□ 1.01
DDX54-207ENST00000550016 GDPD2Q9HCC8 539 aa21.36■■□□□ 1.01
DDX54-207ENST00000550016 TSHZ2Q9NRE2 1034 aa21.36■■□□□ 1.01
DDX54-207ENST00000550016 TMEM161AQ9NX61 479 aa21.36■■□□□ 1.01
DDX54-207ENST00000550016 LARSQ9P2J5 1176 aaKnown RBP21.36■■□□□ 1.01
DDX54-207ENST00000550016 ADGRA3Q8IWK6 1321 aa21.35■■□□□ 1.01
DDX54-207ENST00000550016 RALGAPA2Q2PPJ7 1873 aa21.35■■□□□ 1.01
DDX54-207ENST00000550016 LCHNA4D1U4 455 aa21.35■■□□□ 1.01
DDX54-207ENST00000550016 MYMKA6NI61 221 aa21.35■■□□□ 1.01
DDX54-207ENST00000550016 K7ERI5 159 aa21.35■■□□□ 1.01
DDX54-207ENST00000550016 POLR2DO15514 142 aaKnown RBP21.35■■□□□ 1.01
DDX54-207ENST00000550016 FAM13AO94988 1023 aa21.35■■□□□ 1.01
DDX54-207ENST00000550016 EOMESO95936 686 aa21.35■■□□□ 1.01
DDX54-207ENST00000550016 ARF4P18085 180 aaPredicted RBP21.35■■□□□ 1.01
DDX54-207ENST00000550016 SMTNP53814 917 aa21.35■■□□□ 1.01
DDX54-207ENST00000550016 NOTUMQ6P988 496 aa21.35■■□□□ 1.01
DDX54-207ENST00000550016 SP7Q8TDD2 431 aaPredicted RBP21.35■■□□□ 1.01
DDX54-207ENST00000550016 ZNF689Q96CS4 500 aaPredicted RBP21.35■■□□□ 1.01
DDX54-207ENST00000550016 CCDC51Q96ER9 411 aa21.35■■□□□ 1.01
DDX54-207ENST00000550016 CPB2Q96IY4 423 aa21.35■■□□□ 1.01
DDX54-207ENST00000550016 PYM1Q9BRP8 204 aaKnown RBP21.35■■□□□ 1.01
DDX54-207ENST00000550016 KIFC3Q9BVG8 833 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms