RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 APC2O95996 2303 aa12.16□□□□□ -0.46
TROAP-210ENST00000549534 LAMA1P25391 3075 aa12.16□□□□□ -0.46
TROAP-210ENST00000549534 DOPEY1Q5JWR5 2465 aa12.15□□□□□ -0.46
TROAP-210ENST00000549534 SMIM35A0A1B0GVV1 85 aa12.15□□□□□ -0.46
TROAP-210ENST00000549534 UPK3BL1B0FP48 263 aa12.15□□□□□ -0.46
TROAP-210ENST00000549534 UPK3BL2E5RIL1 263 aa12.15□□□□□ -0.46
TROAP-210ENST00000549534 C2CD2LO14523 706 aa12.15□□□□□ -0.46
TROAP-210ENST00000549534 ECI2O75521 394 aa12.15□□□□□ -0.46
TROAP-210ENST00000549534 LRRC32Q14392 662 aa12.15□□□□□ -0.46
TROAP-210ENST00000549534 GAS6Q14393 721 aa12.15□□□□□ -0.46
TROAP-210ENST00000549534 CCNI2Q6ZMN8 369 aaPredicted RBP12.15□□□□□ -0.46
TROAP-210ENST00000549534 CYFIP1Q7L576 1253 aa12.15□□□□□ -0.46
TROAP-210ENST00000549534 MDM1Q8TC05 714 aa12.15□□□□□ -0.46
TROAP-210ENST00000549534 SSH3Q8TE77 659 aa12.15□□□□□ -0.46
TROAP-210ENST00000549534 KCNK4Q9NYG8 393 aa12.15□□□□□ -0.46
TROAP-210ENST00000549534 MRPL11Q9Y3B7 192 aaKnown RBP12.15□□□□□ -0.46
TROAP-210ENST00000549534 GTF3C3Q9Y5Q9 886 aa12.15□□□□□ -0.46
TROAP-210ENST00000549534 SPTAN1Q13813 2472 aaKnown RBP12.15□□□□□ -0.46
TROAP-210ENST00000549534 SPAARA0A1B0GVQ0 90 aa12.14□□□□□ -0.47
TROAP-210ENST00000549534 KHNYNO15037 678 aaKnown RBP12.14□□□□□ -0.47
TROAP-210ENST00000549534 CCDC192P0DO97 292 aa12.14□□□□□ -0.47
TROAP-210ENST00000549534 CCND2P30279 289 aa12.14□□□□□ -0.47
TROAP-210ENST00000549534 ABCG1P45844 678 aa12.14□□□□□ -0.47
TROAP-210ENST00000549534 GHRHRQ02643 423 aa12.14□□□□□ -0.47
TROAP-210ENST00000549534 PTGDRQ13258 359 aa12.14□□□□□ -0.47
TROAP-210ENST00000549534 DSC3Q14574 896 aa12.14□□□□□ -0.47
TROAP-210ENST00000549534 CLLU1OSQ5K130 101 aa12.14□□□□□ -0.47
TROAP-210ENST00000549534 ZSCAN25Q6NSZ9 544 aa12.14□□□□□ -0.47
TROAP-210ENST00000549534 PDXDC1Q6P996 788 aa12.14□□□□□ -0.47
TROAP-210ENST00000549534 STOX1Q6ZVD7 989 aa12.14□□□□□ -0.47
TROAP-210ENST00000549534 AACSQ86V21 672 aa12.14□□□□□ -0.47
TROAP-210ENST00000549534 FGF13Q92913 245 aa12.14□□□□□ -0.47
TROAP-210ENST00000549534 CRELD1Q96HD1 420 aa12.14□□□□□ -0.47
TROAP-210ENST00000549534 PUS7LQ9H0K6 701 aaKnown RBP12.14□□□□□ -0.47
TROAP-210ENST00000549534 IL17RBQ9NRM6 502 aa12.14□□□□□ -0.47
TROAP-210ENST00000549534 PCDHA1Q9Y5I3 950 aa12.14□□□□□ -0.47
TROAP-210ENST00000549534 BCLAF3A2AJT9 711 aaKnown RBP12.13□□□□□ -0.47
TROAP-210ENST00000549534 TSPY2A6NKD2 308 aa12.13□□□□□ -0.47
TROAP-210ENST00000549534 STAM2O75886 525 aa12.13□□□□□ -0.47
TROAP-210ENST00000549534 TDO2P48775 406 aa12.13□□□□□ -0.47
TROAP-210ENST00000549534 HSD17B4P51659 736 aa12.13□□□□□ -0.47
TROAP-210ENST00000549534 IGBP1P78318 339 aa12.13□□□□□ -0.47
TROAP-210ENST00000549534 HNRNPDQ14103 355 aaKnown RBP12.13□□□□□ -0.47
TROAP-210ENST00000549534 PGM5Q15124 567 aa12.13□□□□□ -0.47
TROAP-210ENST00000549534 C1orf228Q6PIY5 440 aa12.13□□□□□ -0.47
TROAP-210ENST00000549534 ECHDC2Q86YB7 292 aa12.13□□□□□ -0.47
TROAP-210ENST00000549534 GPKOWQ92917 476 aaPredicted RBP eCLIP12.13□□□□□ -0.47
TROAP-210ENST00000549534 CCDC136Q96JN2 1154 aa12.13□□□□□ -0.47
TROAP-210ENST00000549534 KXD1Q9BQD3 176 aa12.13□□□□□ -0.47
TROAP-210ENST00000549534 TRPV5Q9NQA5 729 aa12.13□□□□□ -0.47
TROAP-210ENST00000549534 PAG1Q9NWQ8 432 aa12.13□□□□□ -0.47
TROAP-210ENST00000549534 KAT6AQ92794 2004 aa12.13□□□□□ -0.47
TROAP-210ENST00000549534 ABCA12Q86UK0 2595 aa12.13□□□□□ -0.47
TROAP-210ENST00000549534 URB1O60287 2271 aaKnown RBP12.12□□□□□ -0.47
TROAP-210ENST00000549534 SPATA31C2B4DYI2 1134 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 ZC3H11AO75152 810 aaKnown RBP eCLIP12.12□□□□□ -0.47
TROAP-210ENST00000549534 HMMRO75330 724 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 RHOBTB1O94844 696 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 GALTP07902 379 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 TCF7P36402 384 aaPredicted RBP12.12□□□□□ -0.47
TROAP-210ENST00000549534 CSRP3P50461 194 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 CREB5Q02930 508 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 ELF2Q15723 593 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 UAP1L1Q3KQV9 507 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 PLK5Q496M5 336 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 PIP4P1Q86T03 277 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 ZNF280BQ86YH2 543 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 SAMD3Q8N6K7 520 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 MSANTD3Q96H12 275 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 RPS6KC1Q96S38 1066 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 SENP7Q9BQF6 1050 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 RWDD1Q9H446 243 aaPredicted RBP12.12□□□□□ -0.47
TROAP-210ENST00000549534 SMARCAD1Q9H4L7 1026 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 PRORYQ9H606 182 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 SDK1Q7Z5N4 2213 aa12.12□□□□□ -0.47
TROAP-210ENST00000549534 SHROOM3Q8TF72 1996 aa12.11□□□□□ -0.47
TROAP-210ENST00000549534 TEX28O15482 410 aa12.11□□□□□ -0.47
TROAP-210ENST00000549534 FIBPO43427 364 aa12.11□□□□□ -0.47
TROAP-210ENST00000549534 URODP06132 367 aa12.11□□□□□ -0.47
TROAP-210ENST00000549534 PDHBP11177 359 aa12.11□□□□□ -0.47
TROAP-210ENST00000549534 TOP1P11387 765 aaKnown RBP12.11□□□□□ -0.47
TROAP-210ENST00000549534 INSRRP14616 1297 aa12.11□□□□□ -0.47
TROAP-210ENST00000549534 ZSCAN20P17040 1043 aaPredicted RBP12.11□□□□□ -0.47
TROAP-210ENST00000549534 GNAT2P19087 354 aa12.11□□□□□ -0.47
TROAP-210ENST00000549534 MLLT6P55198 1093 aaPredicted RBP12.11□□□□□ -0.47
TROAP-210ENST00000549534 ZNF543Q08ER8 600 aa12.11□□□□□ -0.47
TROAP-210ENST00000549534 FAM181AQ8N9Y4 354 aa12.11□□□□□ -0.47
TROAP-210ENST00000549534 GIMAP8Q8ND71 665 aaPredicted RBP12.11□□□□□ -0.47
TROAP-210ENST00000549534 PANK1Q8TE04 598 aa12.11□□□□□ -0.47
TROAP-210ENST00000549534 BCL7CQ8WUZ0 217 aaPredicted RBP12.11□□□□□ -0.47
TROAP-210ENST00000549534 TMEM40Q8WWA1 233 aa12.11□□□□□ -0.47
TROAP-210ENST00000549534 ADAMTS14Q8WXS8 1223 aa12.11□□□□□ -0.47
TROAP-210ENST00000549534 VN1R3Q9BXE9 311 aa12.11□□□□□ -0.47
TROAP-210ENST00000549534 RXFP1Q9HBX9 757 aa12.11□□□□□ -0.47
TROAP-210ENST00000549534 ZBTB47Q9UFB7 747 aaPredicted RBP12.11□□□□□ -0.47
TROAP-210ENST00000549534 SRPK3Q9UPE1 567 aa12.11□□□□□ -0.47
TROAP-210ENST00000549534 GINS2Q9Y248 185 aa12.11□□□□□ -0.47
TROAP-210ENST00000549534 F5P12259 2224 aa12.1□□□□□ -0.47
TROAP-210ENST00000549534 TEX51A0A1B0GUA7 166 aa12.1□□□□□ -0.47
TROAP-210ENST00000549534 CFBP00751 764 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms