RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 NUGGCQ68CJ6 796 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 CCDC25Q86WR0 208 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 RHOT2Q8IXI1 618 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 FAM186BQ8IYM0 893 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 COG5Q9UP83 839 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 ARL2BPQ9Y2Y0 163 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 ALG6Q9Y672 507 aa15.31■□□□□ 0.04
SRP54-202ENST00000546080 TBCAO75347 108 aaKnown RBP15.3■□□□□ 0.04
SRP54-202ENST00000546080 CTNNA2P26232 953 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 MSH2P43246 934 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 ATP11AP98196 1134 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 ZNF543Q08ER8 600 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 TTC27Q6P3X3 843 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 OTUD6AQ7L8S5 288 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 SPATA21Q7Z572 469 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 ERICH1Q86X53 443 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 CCDC24Q8N4L8 307 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 ARMC2Q8NEN0 867 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 TBC1D16Q8TBP0 767 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 SYT11Q9BT88 431 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 ARHGEF3Q9NR81 526 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 SLC5A4Q9NY91 659 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 TAS2R14Q9NYV8 317 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 ATF5Q9Y2D1 282 aaPredicted RBP15.3■□□□□ 0.04
SRP54-202ENST00000546080 RTCBQ9Y3I0 505 aaKnown RBP15.3■□□□□ 0.04
SRP54-202ENST00000546080 PLIN4Q96Q06 1357 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 CDK5RAP2Q96SN8 1893 aa15.3■□□□□ 0.04
SRP54-202ENST00000546080 TMEM120BA0PK00 339 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 RSPH10B2B2RC85 870 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 GGPS1O95749 300 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 RSPH10BP0C881 870 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 ATP5DP30049 168 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 GRIK3Q13003 919 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 LONRF1Q17RB8 773 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 ZNF804AQ7Z570 1209 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 CCDC105Q8IYK2 499 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 SPICE1Q8N0Z3 855 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 MICAL1Q8TDZ2 1067 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 ARHGEF2Q92974 986 aaKnown RBP15.29■□□□□ 0.04
SRP54-202ENST00000546080 CNKSR1Q969H4 720 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 RXFP1Q9HBX9 757 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 CTTNBP2NLQ9P2B4 639 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 MYO3BQ8WXR4 1341 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 TNRC6CQ9HCJ0 1690 aaKnown RBP15.29■□□□□ 0.04
SRP54-202ENST00000546080 GPR75-ASB3A0A0A6YYF3 556 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 TMEM110-MUSTN1A8MSY1 372 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 SMNDC1O75940 238 aaKnown RBP eCLIP15.29■□□□□ 0.043e-23■■■■□ 22.6
SRP54-202ENST00000546080 GJB6O95452 261 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 ALAS1P13196 640 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 ATP2A2P16615 1042 aaKnown RBP15.29■□□□□ 0.04
SRP54-202ENST00000546080 PSMC2P35998 433 aaKnown RBP15.29■□□□□ 0.04
SRP54-202ENST00000546080 FMO5P49326 533 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 CAPRIN2Q6IMN6 1127 aaKnown RBP15.29■□□□□ 0.04
SRP54-202ENST00000546080 TTBK2Q6IQ55 1244 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 C11orf63Q6NUN7 778 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 CYFIP1Q7L576 1253 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 NBPF5PQ86XG9 351 aaPredicted RBP15.29■□□□□ 0.04
SRP54-202ENST00000546080 ANKRD42Q8N9B4 389 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 KRT35Q92764 455 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 ART4Q93070 314 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 ZSWIM1Q9BR11 485 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 MOV10L1Q9BXT6 1211 aaKnown RBP15.29■□□□□ 0.04
SRP54-202ENST00000546080 PNMA3Q9UL41 463 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 PTPN22Q9Y2R2 807 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 PCDHA3Q9Y5H8 950 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 PASKQ96RG2 1323 aa15.29■□□□□ 0.04
SRP54-202ENST00000546080 SBF2Q86WG5 1849 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 USP17L15C9J2P7 530 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 USP17L13C9JLJ4 530 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 USP17L11C9JVI0 530 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 USP17L18D6R9N7 530 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 USP17L22D6RA61 530 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 USP17L17D6RBQ6 530 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 USP17L19D6RCP7 530 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 USP17L20D6RJB6 530 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 ZBTB5O15062 677 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 SLC16A2P36021 539 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 MARCKSL1P49006 195 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 KCNA1Q09470 495 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 USP17L24Q0WX57 530 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 USP17L6PQ6QN14 398 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 TRMT10CQ7L0Y3 403 aaKnown RBP15.28■□□□□ 0.04
SRP54-202ENST00000546080 CLEC10AQ8IUN9 316 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 BORCS6Q96GS4 357 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 ANO3Q9BYT9 981 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 TRIM7Q9C029 511 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 GPR88Q9GZN0 384 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 KCNK9Q9NPC2 374 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 PFASO15067 1338 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 USP17L10C9JJH3 530 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 ANKRD63C9JTQ0 380 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 RPA1P27694 616 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 CDC25CP30307 473 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 HADHBP55084 474 aaKnown RBP15.28■□□□□ 0.04
SRP54-202ENST00000546080 CALCOCO2Q13137 446 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 ARHGAP44Q17R89 818 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 DPP8Q6V1X1 898 aaPredicted RBP15.28■□□□□ 0.04
SRP54-202ENST00000546080 PALB2Q86YC2 1186 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 CERKQ8TCT0 537 aa15.28■□□□□ 0.04
SRP54-202ENST00000546080 SERPINB12Q96P63 405 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms