RNA–Protein interactions for RNA: ENST00000544669.5

CPSF7-223, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,800 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-223ENST00000544669 WNT8AQ9H1J5 351 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 ZNF70Q9UC06 446 aaPredicted RBP14.11□□□□□ -0.15
CPSF7-223ENST00000544669 FAM153AQ9UHL3 310 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 MTUS1Q9ULD2 1270 aa14.11□□□□□ -0.15
CPSF7-223ENST00000544669 LOXHD1Q8IVV2 1947 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 ESYT3A0FGR9 886 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 BUB1BO60566 1050 aaPredicted RBP14.1□□□□□ -0.15
CPSF7-223ENST00000544669 MTA2O94776 668 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 FGGP02679 453 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 GTF2H1P32780 548 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 CCT5P48643 541 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 MFAP3P55082 362 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 RNASE9P60153 205 aaKnown RBP14.1□□□□□ -0.15
CPSF7-223ENST00000544669 GTF2BQ00403 316 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 KCNA1Q09470 495 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 DRP2Q13474 957 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 AOC3Q16853 763 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 TTC31Q49AM3 519 aaPredicted RBP14.1□□□□□ -0.15
CPSF7-223ENST00000544669 PCNX4Q63HM2 1172 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 CCDC174Q6PII3 467 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 MAIP1Q8WWC4 291 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 KIFAP3Q92845 792 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 ANKEF1Q9NU02 776 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 GRIN2DO15399 1336 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 RPTORQ8N122 1335 aa14.1□□□□□ -0.15
CPSF7-223ENST00000544669 H0YCG3 227 aa14.09□□□□□ -0.15
CPSF7-223ENST00000544669 MAFGO15525 162 aa14.09□□□□□ -0.15
CPSF7-223ENST00000544669 APBA3O96018 575 aa14.09□□□□□ -0.15
CPSF7-223ENST00000544669 LSP1P33241 339 aa14.09□□□□□ -0.15
CPSF7-223ENST00000544669 CAP2P40123 477 aa14.09□□□□□ -0.15
CPSF7-223ENST00000544669 DR1Q01658 176 aa14.09□□□□□ -0.15
CPSF7-223ENST00000544669 MAP3K10Q02779 954 aa14.09□□□□□ -0.15
CPSF7-223ENST00000544669 ITGB3BPQ13352 177 aaPredicted RBP14.09□□□□□ -0.15
CPSF7-223ENST00000544669 SPDYE2Q495Y8 402 aa14.09□□□□□ -0.15
CPSF7-223ENST00000544669 ENOSF1Q7L5Y1 443 aa14.09□□□□□ -0.15
CPSF7-223ENST00000544669 TADA2BQ86TJ2 420 aa14.09□□□□□ -0.15
CPSF7-223ENST00000544669 GPIHBP1Q8IV16 184 aa14.09□□□□□ -0.15
CPSF7-223ENST00000544669 C4orf19Q8IY42 314 aa14.09□□□□□ -0.15
CPSF7-223ENST00000544669 HINFPQ9BQA5 517 aa14.09□□□□□ -0.15
CPSF7-223ENST00000544669 AP1M1Q9BXS5 423 aa14.09□□□□□ -0.15
CPSF7-223ENST00000544669 MTRF1LQ9UGC7 380 aaKnown RBP14.09□□□□□ -0.15
CPSF7-223ENST00000544669 MYH10P35580 1976 aa14.09□□□□□ -0.15
CPSF7-223ENST00000544669 WDR46O15213 610 aaKnown RBP14.08□□□□□ -0.15
CPSF7-223ENST00000544669 FAM107AO95990 144 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 ARP10275 920 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 ECE1P42892 770 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 PTGER2P43116 358 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 CBWD6Q4V339 395 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 ODF2Q5BJF6 829 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 CBWD3Q5JTY5 395 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 CBWD5Q5RIA9 395 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 SEL1L2Q5TEA6 688 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 SMYD5Q6GMV2 418 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 PPP1R2P3Q6NXS1 205 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 AGBL3Q8NEM8 1001 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 P3H4Q92791 437 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 RNPC3Q96LT9 517 aaKnown RBP14.08□□□□□ -0.15
CPSF7-223ENST00000544669 PSMD1Q99460 953 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 FMO2Q99518 471 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 ERP44Q9BS26 406 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 DDX47Q9H0S4 455 aaKnown RBP14.08□□□□□ -0.15
CPSF7-223ENST00000544669 UVRAGQ9P2Y5 699 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 CCPG1Q9ULG6 757 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 FAM169AQ9Y6X4 670 aa14.08□□□□□ -0.15
CPSF7-223ENST00000544669 CCDC169A6NNP5 214 aa14.08□□□□□ -0.16
CPSF7-223ENST00000544669 TCP10L2B9ZVM9 353 aa14.08□□□□□ -0.16
CPSF7-223ENST00000544669 DDX3YO15523 660 aaKnown RBP14.08□□□□□ -0.16
CPSF7-223ENST00000544669 PPFIA2O75334 1257 aa14.08□□□□□ -0.16
CPSF7-223ENST00000544669 MRPS25P82663 173 aaKnown RBP14.08□□□□□ -0.16
CPSF7-223ENST00000544669 KRT76Q01546 638 aa14.08□□□□□ -0.16
CPSF7-223ENST00000544669 IFFO1Q0D2I5 559 aa14.08□□□□□ -0.16
CPSF7-223ENST00000544669 SHROOM1Q2M3G4 852 aaPredicted RBP14.08□□□□□ -0.16
CPSF7-223ENST00000544669 OTUD6AQ7L8S5 288 aa14.08□□□□□ -0.16
CPSF7-223ENST00000544669 LMO3Q8TAP4 145 aa14.08□□□□□ -0.16
CPSF7-223ENST00000544669 UBLCP1Q8WVY7 318 aaPredicted RBP14.08□□□□□ -0.16
CPSF7-223ENST00000544669 HOOK2Q96ED9 719 aa14.08□□□□□ -0.16
CPSF7-223ENST00000544669 UBE2TQ9NPD8 197 aaPredicted RBP14.08□□□□□ -0.16
CPSF7-223ENST00000544669 KCNH7Q9NS40 1196 aa14.08□□□□□ -0.16
CPSF7-223ENST00000544669 SEPT11Q9NVA2 429 aaKnown RBP14.08□□□□□ -0.16
CPSF7-223ENST00000544669 CTTNBP2NLQ9P2B4 639 aa14.08□□□□□ -0.16
CPSF7-223ENST00000544669 AMACRQ9UHK6 382 aa14.08□□□□□ -0.16
CPSF7-223ENST00000544669 CNOT7Q9UIV1 285 aaKnown RBP14.08□□□□□ -0.16
CPSF7-223ENST00000544669 PCDHAC2Q9Y5I4 1007 aa14.08□□□□□ -0.16
CPSF7-223ENST00000544669 UBIAD1Q9Y5Z9 338 aa14.08□□□□□ -0.16
CPSF7-223ENST00000544669 H0YGN5 161 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 ECHS1P30084 290 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 INPP5BP32019 993 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 MAN1A1P33908 653 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 RARRES1P49788 294 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 PSMC5P62195 406 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 JAG1P78504 1218 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 POU5F1Q01860 360 aaKnown RBP14.07□□□□□ -0.16
CPSF7-223ENST00000544669 MAPK7Q13164 816 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 SLMAPQ14BN4 828 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 PTGISQ16647 500 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 EPC2Q52LR7 807 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 KCTD16Q68DU8 428 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 GJB7Q6PEY0 223 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 FOXR1Q6PIV2 292 aa14.07□□□□□ -0.16
CPSF7-223ENST00000544669 TMC3Q7Z5M5 1100 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms