RNA–Protein interactions for RNA: ENST00000542772.1

ABCF1-207, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 223 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-207ENST00000542772 ITGB8P26012 769 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 NMT1P30419 496 aaKnown RBP6.47□□□□□ -1.37
ABCF1-207ENST00000542772 HOXA11P31270 313 aaPredicted RBP6.47□□□□□ -1.37
ABCF1-207ENST00000542772 HOXD13P35453 343 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 THPOP40225 353 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 MCCD1P59942 119 aaPredicted RBP6.47□□□□□ -1.37
ABCF1-207ENST00000542772 SNRPFP62306 86 aaKnown RBP6.47□□□□□ -1.37
ABCF1-207ENST00000542772 ASIC1P78348 528 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 MBTPS1Q14703 1052 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 BMT2Q1RMZ1 405 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 FBXO47Q5MNV8 452 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 CENPPQ6IPU0 288 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 MFSD5Q6N075 450 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 FOXR2Q6PJQ5 311 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 TAS1R3Q7RTX0 852 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 SFR1Q86XK3 245 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 FAM178BQ8IXR5 827 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 GUF1Q8N442 669 aaKnown RBP6.47□□□□□ -1.37
ABCF1-207ENST00000542772 CCDC155Q8N6L0 562 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 KIAA0895Q8NCT3 520 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 SCFD1Q8WVM8 642 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 TMEM40Q8WWA1 233 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 ERCC4Q92889 916 aaPredicted RBP6.47□□□□□ -1.37
ABCF1-207ENST00000542772 CCDC47Q96A33 483 aaKnown RBP6.47□□□□□ -1.37
ABCF1-207ENST00000542772 SYAP1Q96A49 352 aaPredicted RBP6.47□□□□□ -1.37
ABCF1-207ENST00000542772 TRIM43Q96BQ3 446 aaPredicted RBP6.47□□□□□ -1.37
ABCF1-207ENST00000542772 HVCN1Q96D96 273 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 PRIMPOLQ96LW4 560 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 FUCA2Q9BTY2 467 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 HTATIP2Q9BUP3 242 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 TRAIPQ9BWF2 469 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 GCOM2Q9BZD3 368 aaPredicted RBP6.47□□□□□ -1.37
ABCF1-207ENST00000542772 OSBPL7Q9BZF2 842 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 MINDY3Q9H8M7 445 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 PTPRHQ9HD43 1115 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 CHST12Q9NRB3 414 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 TMEM39AQ9NV64 488 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 MAN1B1Q9UKM7 699 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 TBX20Q9UMR3 447 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 NOD1Q9Y239 953 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 AKT3Q9Y243 479 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 ATP11BQ9Y2G3 1177 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 NOC2LQ9Y3T9 749 aaKnown RBP6.47□□□□□ -1.37
ABCF1-207ENST00000542772 TRPV2Q9Y5S1 764 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 CDY2AQ9Y6F7 541 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 STYXL1Q9Y6J8 313 aa6.47□□□□□ -1.37
ABCF1-207ENST00000542772 A0A1B0GUA9 196 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 DENND3A2RUS2 1198 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 CCDC169A6NNP5 214 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 PDXKO00764 312 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 GPR182O15218 404 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 SLC16A4O15374 487 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 TGFB1I1O43294 461 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 NBNO60934 754 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 TBCAO75347 108 aaKnown RBP6.46□□□□□ -1.38
ABCF1-207ENST00000542772 PROZP22891 400 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 AXLP30530 894 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 RFC2P35250 354 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 PPP1R2P41236 205 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 PRCPP42785 496 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 PHKA2P46019 1235 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 CASP5P51878 434 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 NLRP12P59046 1061 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 FAM189BP81408 668 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 MBTD1Q05BQ5 628 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 DMP1Q13316 513 aaPredicted RBP6.46□□□□□ -1.38
ABCF1-207ENST00000542772 LPIN1Q14693 890 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 NFIL3Q16649 462 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 KIZQ2M2Z5 673 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 ZC2HC1CQ53FD0 456 aaPredicted RBP6.46□□□□□ -1.38
ABCF1-207ENST00000542772 PLEKHG4Q58EX7 1191 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 FAM26FQ5R3K3 315 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 L1TD1Q5T7N2 865 aaKnown RBP6.46□□□□□ -1.38
ABCF1-207ENST00000542772 CAVIN1Q6NZI2 390 aaKnown RBP6.46□□□□□ -1.38
ABCF1-207ENST00000542772 ZPBP2Q6X784 338 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 LRRC8DQ7L1W4 858 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 RTN4RL1Q86UN2 441 aaPredicted RBP6.46□□□□□ -1.38
ABCF1-207ENST00000542772 MAP4K3Q8IVH8 894 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 ADSSL1Q8N142 457 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 MLKLQ8NB16 471 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 GLIS3Q8NEA6 775 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 DEPTORQ8TB45 409 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 NLRP7Q8WX94 980 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 HPS3Q969F9 1004 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 DHTKD1Q96HY7 919 aaPredicted RBP6.46□□□□□ -1.38
ABCF1-207ENST00000542772 ACO2Q99798 780 aaKnown RBP6.46□□□□□ -1.38
ABCF1-207ENST00000542772 FGFBP2Q9BYJ0 223 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 FAM49AQ9H0Q0 323 aaPredicted RBP6.46□□□□□ -1.38
ABCF1-207ENST00000542772 WNT8AQ9H1J5 351 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 KCTD10Q9H3F6 313 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 HIPK3Q9H422 1215 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 TMEM206Q9H813 350 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 AGO3Q9H9G7 860 aaKnown RBP6.46□□□□□ -1.38
ABCF1-207ENST00000542772 MRPL44Q9H9J2 332 aaKnown RBP6.46□□□□□ -1.38
ABCF1-207ENST00000542772 ERVK-5Q9HDB9 667 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 SLC39A2Q9NP94 309 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 EXOC1Q9NV70 894 aa6.46□□□□□ -1.38
ABCF1-207ENST00000542772 PRMT7Q9NVM4 692 aaPredicted RBP6.46□□□□□ -1.38
ABCF1-207ENST00000542772 CGNQ9P2M7 1197 aaKnown RBP6.46□□□□□ -1.38
ABCF1-207ENST00000542772 TRAF3IP3Q9Y228 551 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms