RNA–Protein interactions for RNA: ENST00000540896.1

CLTCL1-206, Transcript of clathrin heavy chain like 1, humanhuman

TSL 4

Gene CLTCL1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-206ENST00000540896 HMX1Q9NP08 348 aaPredicted RBP7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 KCND2Q9NZV8 630 aa7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 MAFBQ9Y5Q3 323 aaPredicted RBP7.36□□□□□ -1.23
CLTCL1-206ENST00000540896 IGKV6D-21A0A0A0MT36 114 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 TMEM150BA6NC51 233 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 GOLGA6L19H0YKK7 550 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 ZNF862O60290 1169 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 USO1O60763 962 aaKnown RBP7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 MYL3P08590 195 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 CYBAP13498 195 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 CCL5P13501 91 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 AKR1A1P14550 325 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 RARRES1P49788 294 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 CPT1AP50416 773 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 SLC26A2P50443 739 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 POLGP54098 1239 aaPredicted RBP7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 NPEPPSP55786 919 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 CBLBQ13191 982 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 PSMD2Q13200 908 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 GIT2Q14161 759 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 KCNB1Q14721 858 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 DGKDQ16760 1214 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 DPCR1Q3MIW9 517 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 MTERF2Q49AM1 385 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 ARSHQ5FYA8 562 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 INTS6LQ5JSJ4 861 aaKnown RBP7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 FAM102BQ5T8I3 360 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 ZNF658Q5TYW1 1059 aaPredicted RBP7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 PLA2G4FQ68DD2 849 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 CNNM4Q6P4Q7 775 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 UNC13DQ70J99 1090 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 ANO5Q75V66 913 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 TLK2Q86UE8 772 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 GAS2L3Q86XJ1 694 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 HOMEZQ8IX15 550 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 TNS4Q8IZW8 715 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 MYCT1Q8N699 235 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 SPATA20Q8TB22 786 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 ZNF333Q96JL9 665 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 REEP2Q9BRK0 252 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 FUCA2Q9BTY2 467 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 RUSC1Q9BVN2 902 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 FAM117AQ9C073 453 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 RNF208Q9H0X6 261 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 RBSNQ9H1K0 784 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 POLD4Q9HCU8 107 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 CYP26B1Q9NR63 512 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 ERAP1Q9NZ08 941 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 TBC1D7Q9P0N9 293 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 ZNF215Q9UL58 517 aaPredicted RBP7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 MAPK8IP1Q9UQF2 711 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 COL4A3BPQ9Y5P4 624 aa7.35□□□□□ -1.23
CLTCL1-206ENST00000540896 PDE4DIPQ5VU43 2346 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 EMSYQ7Z589 1322 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 IGSF9BQ9UPX0 1349 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 MCM3APO60318 1980 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 SFI1A8K8P3 1242 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 SMTNL1A8MU46 457 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 H3BRB1 525 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 SEPT4O43236 478 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 KLRC4O43908 158 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 HIP1RO75146 1068 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 DUSP11O75319 330 aaKnown RBP7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 LGR5O75473 907 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 RHOBTB3O94955 611 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 KIF20AO95235 890 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 LGALS2P05162 132 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 C6orf222P0C671 652 aaPredicted RBP7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 ZNF286BP0CG31 522 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 RARBP10826 455 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 GAP43P17677 238 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 ATP4AP20648 1035 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 TPM4P67936 248 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 TBC1D8BQ0IIM8 1120 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 COASYQ13057 564 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 TPD52L1Q16890 204 aaPredicted RBP7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 FAM26FQ5R3K3 315 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 KLHL10Q6JEL2 608 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 C11orf57Q6ZUT1 292 aaPredicted RBP7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 C1orf186Q6ZWK4 172 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 TRIM50Q86XT4 487 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 SMYD4Q8IYR2 804 aaPredicted RBP7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 CCDC155Q8N6L0 562 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 FAM200AQ8TCP9 573 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 AFAP1L1Q8TED9 768 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 ATP8B4Q8TF62 1192 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 SLC7A3Q8WY07 619 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 LENG1Q96BZ8 264 aaPredicted RBP7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 DNAJC19Q96DA6 116 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 ABHD8Q96I13 439 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 DRC1Q96MC2 740 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 PCYT2Q99447 389 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 TIPINQ9BVW5 301 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 NIFKQ9BYG3 293 aaKnown RBP7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 TUT1Q9H6E5 874 aaKnown RBP7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 MRPL44Q9H9J2 332 aaKnown RBP7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 PARVGQ9HBI0 331 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 CBX8Q9HC52 389 aa7.34□□□□□ -1.23
CLTCL1-206ENST00000540896 SLC39A2Q9NP94 309 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms