RNA–Protein interactions for RNA: ENST00000539442.1

LEMD3-202, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 932 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-202ENST00000539442 DEPTORQ8TB45 409 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 GOLGA5Q8TBA6 731 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 LMBR1Q8WVP7 490 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 ACCSQ96QU6 501 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 MAP7D2Q96T17 732 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 SEMA6BQ9H3T3 888 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 TYW1Q9NV66 732 aaKnown RBP11.72□□□□□ -0.53
LEMD3-202ENST00000539442 SETD4Q9NVD3 440 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 CGNQ9P2M7 1197 aaKnown RBP11.72□□□□□ -0.53
LEMD3-202ENST00000539442 ARHGAP28Q9P2N2 729 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 SUCLA2Q9P2R7 463 aaPredicted RBP11.72□□□□□ -0.53
LEMD3-202ENST00000539442 EXOC7Q9UPT5 735 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 TRAF3IP3Q9Y228 551 aa11.72□□□□□ -0.53
LEMD3-202ENST00000539442 SMIM35A0A1B0GVV1 85 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 TRIM49BA6NDI0 452 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 SLC16A4O15374 487 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 CALUO43852 315 aaPredicted RBP11.71□□□□□ -0.53
LEMD3-202ENST00000539442 PRPF6O94906 941 aaKnown RBP11.71□□□□□ -0.53
LEMD3-202ENST00000539442 FGFR1OPO95684 399 aaKnown RBP11.71□□□□□ -0.53
LEMD3-202ENST00000539442 RPLP2P05387 115 aaKnown RBP11.71□□□□□ -0.53
LEMD3-202ENST00000539442 CLCN3P51790 818 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 EFNA5P52803 228 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 LBX1P52954 281 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 ACLYP53396 1101 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 PMS1P54277 932 aaKnown RBP11.71□□□□□ -0.53
LEMD3-202ENST00000539442 CDC42EP1Q00587 391 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 PTPN11Q06124 597 aaPredicted RBP11.71□□□□□ -0.53
LEMD3-202ENST00000539442 SPAG1Q07617 926 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 LAMTOR4Q0VGL1 99 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 DRP2Q13474 957 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 CAPSQ13938 189 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 NFIL3Q16649 462 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 ZC2HC1CQ53FD0 456 aaPredicted RBP11.71□□□□□ -0.53
LEMD3-202ENST00000539442 CDCA2Q69YH5 1023 aaPredicted RBP11.71□□□□□ -0.53
LEMD3-202ENST00000539442 ANKRD40Q6AI12 368 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 MAP4K3Q8IVH8 894 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 ZBTB8OSQ8IWT0 167 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 NELFCDQ8IXH7 590 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 LRRC71Q8N4P6 559 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 CSGALNACT2Q8N6G5 542 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 METTL13Q8N6R0 699 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 PRPF31Q8WWY3 499 aaKnown RBP11.71□□□□□ -0.53
LEMD3-202ENST00000539442 DUSP9Q99956 384 aaKnown RBP11.71□□□□□ -0.53
LEMD3-202ENST00000539442 NFKBIZQ9BYH8 718 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 GBP3Q9H0R5 595 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 UNC93B1Q9H1C4 597 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 C2orf40Q9H1Z8 148 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 THAP9Q9H5L6 903 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 TMEM134Q9H6X4 195 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 FANCLQ9NW38 375 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 HDAC6Q9UBN7 1215 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 GTF2IRD1Q9UHL9 959 aa11.71□□□□□ -0.53
LEMD3-202ENST00000539442 SCN10AQ9Y5Y9 1956 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 ZMYM2Q9UBW7 1377 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 ADGRA3Q8IWK6 1321 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 DENND3A2RUS2 1198 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 LRRIQ4A6NIV6 560 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 ZNF18P17022 549 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 HOXD13P35453 343 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 CHMP4BP1P59074 171 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 FKBP3Q00688 224 aaKnown RBP11.7□□□□□ -0.54
LEMD3-202ENST00000539442 MYBPC2Q14324 1141 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 NBPF20Q3BBV1 942 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 CDKAL1Q5VV42 579 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 TAF2Q6P1X5 1199 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 SARM1Q6SZW1 724 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 HS2ST1Q7LGA3 356 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 ZNF410Q86VK4 478 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 IFNLR1Q8IU57 520 aaPredicted RBP11.7□□□□□ -0.54
LEMD3-202ENST00000539442 RHPN2Q8IUC4 686 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 FAM114A1Q8IWE2 563 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 ZC3H3Q8IXZ2 948 aaKnown RBP11.7□□□□□ -0.54
LEMD3-202ENST00000539442 RNF149Q8NC42 400 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 TMEM174Q8WUU8 243 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 GLT1D1Q96MS3 346 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 CEP63Q96MT8 703 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 SEZ6LQ9BYH1 1024 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 HSD3B7Q9H2F3 369 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 TBX20Q9UMR3 447 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 AKT3Q9Y243 479 aa11.7□□□□□ -0.54
LEMD3-202ENST00000539442 MYH11P35749 1972 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 KBTBD13C9JR72 458 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 DNM1LO00429 736 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 PIGRP01833 764 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 CYP2C9P11712 490 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 CCL5P13501 91 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 RPL13P26373 211 aaKnown RBP11.69□□□□□ -0.54
LEMD3-202ENST00000539442 PHKA2P46019 1235 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 KCNA1Q09470 495 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 STRN3Q13033 797 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 LRRC55Q6ZSA7 311 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 C12orf56Q8IXR9 622 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 KIAA0319LQ8IZA0 1049 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 SYCP3Q8IZU3 236 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 NME8Q8N427 588 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 ANP32BQ92688 251 aaKnown RBP11.69□□□□□ -0.54
LEMD3-202ENST00000539442 ARMC5Q96C12 935 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 ZBTB10Q96DT7 871 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 ZNF333Q96JL9 665 aa11.69□□□□□ -0.54
LEMD3-202ENST00000539442 KIFC3Q9BVG8 833 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms