RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 SLC35C1Q96A29 364 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 RMDN2Q96LZ7 410 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 ZNF287Q9HBT7 754 aa20.03■□□□□ 0.8
SFSWAP-207ENST00000538548 ABLIM1O14639 778 aa20.02■□□□□ 0.8
SFSWAP-207ENST00000538548 AKAP3O75969 853 aa20.02■□□□□ 0.8
SFSWAP-207ENST00000538548 CASP5P51878 434 aa20.02■□□□□ 0.8
SFSWAP-207ENST00000538548 NBPF20Q3BBV1 942 aa20.02■□□□□ 0.8
SFSWAP-207ENST00000538548 THEMIS2Q5TEJ8 643 aa20.02■□□□□ 0.8
SFSWAP-207ENST00000538548 INTS5Q6P9B9 1019 aaKnown RBP20.02■□□□□ 0.8
SFSWAP-207ENST00000538548 TRMT10CQ7L0Y3 403 aaKnown RBP20.02■□□□□ 0.8
SFSWAP-207ENST00000538548 ART4Q93070 314 aa20.02■□□□□ 0.8
SFSWAP-207ENST00000538548 SERPINB12Q96P63 405 aa20.02■□□□□ 0.8
SFSWAP-207ENST00000538548 ZHX3Q9H4I2 956 aa20.02■□□□□ 0.8
SFSWAP-207ENST00000538548 RTCBQ9Y3I0 505 aaKnown RBP20.02■□□□□ 0.8
SFSWAP-207ENST00000538548 PFASO15067 1338 aa20.02■□□□□ 0.8
SFSWAP-207ENST00000538548 PDXKO00764 312 aa20.02■□□□□ 0.79
SFSWAP-207ENST00000538548 CALUO43852 315 aaPredicted RBP20.02■□□□□ 0.79
SFSWAP-207ENST00000538548 PLCG2P16885 1265 aa20.02■□□□□ 0.79
SFSWAP-207ENST00000538548 GNAZP19086 355 aa20.02■□□□□ 0.79
SFSWAP-207ENST00000538548 CTNNA2P26232 953 aa20.02■□□□□ 0.79
SFSWAP-207ENST00000538548 SOX5P35711 763 aa20.02■□□□□ 0.79
SFSWAP-207ENST00000538548 CTCFP49711 727 aaPredicted RBP20.02■□□□□ 0.79
SFSWAP-207ENST00000538548 SLC30A9Q6PML9 568 aa20.02■□□□□ 0.79
SFSWAP-207ENST00000538548 KCNV2Q8TDN2 545 aa20.02■□□□□ 0.79
SFSWAP-207ENST00000538548 FBF1Q8TES7 1133 aa20.02■□□□□ 0.79
SFSWAP-207ENST00000538548 ETNK1Q9HBU6 452 aa20.02■□□□□ 0.79
SFSWAP-207ENST00000538548 TMOD4Q9NZQ9 345 aa20.02■□□□□ 0.79
SFSWAP-207ENST00000538548 SLC16A3O15427 465 aaKnown RBP20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 ALAS1P13196 640 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 LMNB2Q03252 620 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 SPTY2D1Q68D10 685 aaPredicted RBP20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 OTUD6AQ7L8S5 288 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 SH3RF3Q8TEJ3 882 aaPredicted RBP20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 COA7Q96BR5 231 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 UBA5Q9GZZ9 404 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 RNPEPL1Q9HAU8 725 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 TXLNGQ9NUQ3 528 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 MIF4GDA9UHW6 222 aaKnown RBP20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 ACVR2BQ13705 512 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 LONRF1Q17RB8 773 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 PARP6Q2NL67 630 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 ZNF568Q3ZCX4 644 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 CMPK2Q5EBM0 449 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 TTC27Q6P3X3 843 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 CCDC137Q6PK04 289 aaKnown RBP20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 CYFIP1Q7L576 1253 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 APLFQ8IW19 511 aaPredicted RBP20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 GJA10Q969M2 543 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 ARHGEF26Q96DR7 871 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 USP40Q9NVE5 1235 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 ANKIB1Q9P2G1 1089 aa20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 CPSF2Q9P2I0 782 aaKnown RBP20.01■□□□□ 0.79
SFSWAP-207ENST00000538548 TAF1P21675 1872 aa20■□□□□ 0.79
SFSWAP-207ENST00000538548 POTEB3A0JP26 581 aa20■□□□□ 0.79
SFSWAP-207ENST00000538548 POTECB2RU33 542 aa20■□□□□ 0.79
SFSWAP-207ENST00000538548 CALB2P22676 271 aa20■□□□□ 0.79
SFSWAP-207ENST00000538548 MRPS35P82673 323 aaKnown RBP20■□□□□ 0.79
SFSWAP-207ENST00000538548 SF3B3Q15393 1217 aaKnown RBP20■□□□□ 0.79
SFSWAP-207ENST00000538548 ARSHQ5FYA8 562 aa20■□□□□ 0.79
SFSWAP-207ENST00000538548 POTEBQ6S5H4 581 aa20■□□□□ 0.79
SFSWAP-207ENST00000538548 UBL4BQ8N7F7 174 aa20■□□□□ 0.79
SFSWAP-207ENST00000538548 EYA3Q99504 573 aa20■□□□□ 0.79
SFSWAP-207ENST00000538548 SYT11Q9BT88 431 aa20■□□□□ 0.79
SFSWAP-207ENST00000538548 CDCA7Q9BWT1 371 aaPredicted RBP20■□□□□ 0.79
SFSWAP-207ENST00000538548 CCDC87Q9NVE4 849 aa20■□□□□ 0.79
SFSWAP-207ENST00000538548 SLC26A4O43511 780 aa20■□□□□ 0.79
SFSWAP-207ENST00000538548 GGPS1O95749 300 aa20■□□□□ 0.79
SFSWAP-207ENST00000538548 TRIM68Q6AZZ1 485 aa20■□□□□ 0.79
SFSWAP-207ENST00000538548 NEDD1Q8NHV4 660 aa20■□□□□ 0.79
SFSWAP-207ENST00000538548 UTP4Q969X6 686 aaKnown RBP20■□□□□ 0.79
SFSWAP-207ENST00000538548 TGS1Q96RS0 853 aaKnown RBP20■□□□□ 0.79
SFSWAP-207ENST00000538548 MPHOSPH10O00566 681 aaKnown RBP19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 CREB1P16220 341 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 RPL13P26373 211 aaKnown RBP19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 HOXD13P35453 343 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 MGAT5Q09328 741 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 ANO7Q6IWH7 933 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 AADACL2Q6P093 401 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 EPM2AIP1Q7L775 607 aaPredicted RBP19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 LMNTD2Q8IXW0 634 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 ANKRD42Q8N9B4 389 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 GRAMD1AQ96CP6 724 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 TFCP2L1Q9NZI6 479 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 NKX1-2Q9UD57 310 aaPredicted RBP19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 COG5Q9UP83 839 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 ALG6Q9Y672 507 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 SNED1Q8TER0 1413 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 DPPA5A6NC42 116 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 ANKRD62A6NC57 917 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 ATP5HO75947 161 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 SLC12A3P55017 1021 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 C3orf67Q6ZVT6 689 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 ANKLE1Q8NAG6 615 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 TSC22D3Q99576 134 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 STK33Q9BYT3 514 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 THAP2Q9H0W7 228 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 LRMDAQ9H2I8 198 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 KCNK9Q9NPC2 374 aa19.99■□□□□ 0.79
SFSWAP-207ENST00000538548 NR3C1P04150 777 aa19.98■□□□□ 0.79
SFSWAP-207ENST00000538548 HADHBP55084 474 aaKnown RBP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms