RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 STAM2O75886 525 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 POLR2MP0CAP2 368 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 INSRRP14616 1297 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 CLCN4P51793 760 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 POLGP54098 1239 aaPredicted RBP7.43□□□□□ -1.22
CD44-237ENST00000534082 BCAR1P56945 870 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 FAM189BP81408 668 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 SNW1Q13573 536 aaKnown RBP7.43□□□□□ -1.22
CD44-237ENST00000534082 HTR4Q13639 388 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 GIT2Q14161 759 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 WTAPQ15007 396 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 MLF2Q15773 248 aaPredicted RBP7.43□□□□□ -1.22
CD44-237ENST00000534082 ASPRV1Q53RT3 343 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 CLLU1OSQ5K130 101 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 ZMYM1Q5SVZ6 1142 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 ODR4Q5SWX8 454 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 TMEM173Q86WV6 379 aaPredicted RBP7.43□□□□□ -1.22
CD44-237ENST00000534082 SIRT2Q8IXJ6 389 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 PNMA1Q8ND90 353 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 CMASQ8NFW8 434 aaPredicted RBP7.43□□□□□ -1.22
CD44-237ENST00000534082 TRAPPC12Q8WVT3 735 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 SENP7Q9BQF6 1050 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 MYL10Q9BUA6 226 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 DDX23Q9BUQ8 820 aaKnown RBP7.43□□□□□ -1.22
CD44-237ENST00000534082 FAM126AQ9BYI3 521 aaPredicted RBP7.43□□□□□ -1.22
CD44-237ENST00000534082 OSBPL6Q9BZF3 934 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 RTEL1Q9NZ71 1219 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 ST3GAL5Q9UNP4 418 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 MTF2Q9Y483 593 aaPredicted RBP7.43□□□□□ -1.22
CD44-237ENST00000534082 PCDHA2Q9Y5H9 948 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 NUMBLQ9Y6R0 609 aa7.43□□□□□ -1.22
CD44-237ENST00000534082 MYH6P13533 1939 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 DMXL2Q8TDJ6 3036 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 SMIM35A0A1B0GVV1 85 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 GSTTP1A0A1W2PQM5 241 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 TMEM8BA6NDV4 472 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 FAM170BA6NMN3 283 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 ANHXE9PGG2 379 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 TAF4O00268 1085 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 LCE2BO14633 110 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 GPR182O15218 404 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 SMARCA5O60264 1052 aaPredicted RBP7.42□□□□□ -1.22
CD44-237ENST00000534082 FOXD2O60548 495 aaPredicted RBP7.42□□□□□ -1.22
CD44-237ENST00000534082 KLRC2P26717 231 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 CLCN1P35523 988 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 ALDH7A1P49419 539 aaKnown RBP7.42□□□□□ -1.22
CD44-237ENST00000534082 GPC5P78333 572 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 PRKCQQ04759 706 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 FOXC1Q12948 553 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 PLCB4Q15147 1175 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 VPS53Q5VIR6 699 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 BRICD5Q6PL45 260 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 PRR23BQ6ZRT6 265 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 GET4Q7L5D6 327 aaPredicted RBP7.42□□□□□ -1.22
CD44-237ENST00000534082 FAM228AQ86W67 206 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 NME8Q8N427 588 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 FAM160A2Q8N612 972 aaPredicted RBP7.42□□□□□ -1.22
CD44-237ENST00000534082 SAMD3Q8N6K7 520 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 RNF169Q8NCN4 708 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 GIMAP8Q8ND71 665 aaPredicted RBP7.42□□□□□ -1.22
CD44-237ENST00000534082 ST13P5Q8NFI4 369 aaPredicted RBP7.42□□□□□ -1.22
CD44-237ENST00000534082 SEPT1Q8WYJ6 367 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 MAP4K1Q92918 833 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 GPATCH3Q96I76 525 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 LRRCC1Q9C099 1032 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 SMARCAD1Q9H4L7 1026 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 LTB4R2Q9NPC1 389 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 MAN1C1Q9NR34 630 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 FREM2Q5SZK8 3169 aa7.42□□□□□ -1.22
CD44-237ENST00000534082 DOCK8Q8NF50 2099 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 CCDC195A0A1B0GUA6 201 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 TM4SF5O14894 197 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 INPPL1O15357 1258 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 ZC3H11AO75152 810 aaKnown RBP eCLIP7.41□□□□□ -1.22
CD44-237ENST00000534082 LAMP2P13473 410 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 NCLP19338 710 aaKnown RBP7.41□□□□□ -1.22
CD44-237ENST00000534082 CD72P21854 359 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 TARSP26639 723 aaKnown RBP7.41□□□□□ -1.22
CD44-237ENST00000534082 LIMK1P53667 647 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 DSC3Q14574 896 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 AASDHQ4L235 1098 aaPredicted RBP7.41□□□□□ -1.22
CD44-237ENST00000534082 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.41□□□□□ -1.22
CD44-237ENST00000534082 DDX53Q86TM3 631 aaKnown RBP7.41□□□□□ -1.22
CD44-237ENST00000534082 NLRX1Q86UT6 975 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 CELF5Q8N6W0 485 aaKnown RBP7.41□□□□□ -1.22
CD44-237ENST00000534082 HELQQ8TDG4 1101 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 BCL7CQ8WUZ0 217 aaPredicted RBP7.41□□□□□ -1.22
CD44-237ENST00000534082 ZCCHC14Q8WYQ9 949 aaKnown RBP7.41□□□□□ -1.22
CD44-237ENST00000534082 KLHL5Q96PQ7 755 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 ZKSCAN3Q9BRR0 538 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 EMILIN2Q9BXX0 1053 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 MRPL9Q9BYD2 267 aaKnown RBP7.41□□□□□ -1.22
CD44-237ENST00000534082 RHOBTB2Q9BYZ6 727 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 KAT14Q9H8E8 782 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 NAV2Q8IVL1 2488 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 AKAP13Q12802 2813 aa7.41□□□□□ -1.22
CD44-237ENST00000534082 IGSF10Q6WRI0 2623 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 UNC79Q9P2D8 2635 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 ZBTB5O15062 677 aa7.4□□□□□ -1.22
CD44-237ENST00000534082 ATP9AO75110 1047 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms