RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	CCDC136	Q96JN2	1154 aa		6.13	□□□□□ -1.43
ATM-223	ENST00000533979	CEP89	Q96ST8	783 aa		6.13	□□□□□ -1.43
ATM-223	ENST00000533979	MYL10	Q9BUA6	226 aa		6.13	□□□□□ -1.43
ATM-223	ENST00000533979	ZMAT4	Q9H898	229 aa		6.13	□□□□□ -1.43
ATM-223	ENST00000533979	THG1L	Q9NWX6	298 aa	Known RBP	6.13	□□□□□ -1.43
ATM-223	ENST00000533979	GEMIN8	Q9NWZ8	242 aa	Known RBP	6.13	□□□□□ -1.43
ATM-223	ENST00000533979	THRAP3	Q9Y2W1	955 aa	Known RBP	6.13	□□□□□ -1.43
ATM-223	ENST00000533979	GOLGA8B	A8MQT2	603 aa		6.12	□□□□□ -1.43
ATM-223	ENST00000533979	ZNF891	A8MT65	544 aa	Predicted RBP	6.12	□□□□□ -1.43
ATM-223	ENST00000533979	MSX2	P35548	267 aa	Predicted RBP	6.12	□□□□□ -1.43
ATM-223	ENST00000533979	PHC1	P78364	1004 aa		6.12	□□□□□ -1.43
ATM-223	ENST00000533979	RIN1	Q13671	783 aa		6.12	□□□□□ -1.43
ATM-223	ENST00000533979	UNQ6494/PRO21346	Q6UXR6	183 aa		6.12	□□□□□ -1.43
ATM-223	ENST00000533979	MYPN	Q86TC9	1320 aa		6.12	□□□□□ -1.43
ATM-223	ENST00000533979	SGMS1	Q86VZ5	419 aa		6.12	□□□□□ -1.43
ATM-223	ENST00000533979	ZNF610	Q8N9Z0	462 aa		6.12	□□□□□ -1.43
ATM-223	ENST00000533979	EXTL1	Q92935	676 aa		6.12	□□□□□ -1.43
ATM-223	ENST00000533979	ZNF496	Q96IT1	587 aa	Predicted RBP	6.12	□□□□□ -1.43
ATM-223	ENST00000533979	C8orf48	Q96LL4	319 aa		6.12	□□□□□ -1.43
ATM-223	ENST00000533979	TARS2	Q9BW92	718 aa	Known RBP	6.12	□□□□□ -1.43
ATM-223	ENST00000533979	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	6.12	□□□□□ -1.43
ATM-223	ENST00000533979	RBM8A	Q9Y5S9	174 aa	Known RBP	6.12	□□□□□ -1.43
ATM-223	ENST00000533979		A0A087X0B3	334 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	FZD7	O75084	574 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	APOL3	O95236	402 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	JUN	P05412	331 aa	Known RBP	6.11	□□□□□ -1.43
ATM-223	ENST00000533979	LSP1	P33241	339 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	CDKN1C	P49918	316 aa	Predicted RBP	6.11	□□□□□ -1.43
ATM-223	ENST00000533979	TCIRG1	Q13488	830 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	ACAP1	Q15027	740 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	USP39	Q53GS9	565 aa	Known RBP	6.11	□□□□□ -1.43
ATM-223	ENST00000533979	ESPNL	Q6ZVH7	1005 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	TICAM2	Q86XR7	235 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	D2HGDH	Q8N465	521 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	ANKRD53	Q8N9V6	530 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	PPP1R14C	Q8TAE6	165 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	ZNF503	Q96F45	646 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	RPL10L	Q96L21	214 aa	Known RBP	6.11	□□□□□ -1.43
ATM-223	ENST00000533979	GPHA2	Q96T91	129 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	VPS11	Q9H270	941 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	POFUT1	Q9H488	388 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	MTG2	Q9H4K7	406 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	POLR3B	Q9NW08	1133 aa	Predicted RBP	6.11	□□□□□ -1.43
ATM-223	ENST00000533979	KCNG1	Q9UIX4	513 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979	EID1	Q9Y6B2	187 aa		6.11	□□□□□ -1.43
ATM-223	ENST00000533979		A0A1W2PRX2	142 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	ELL2	O00472	640 aa	Predicted RBP	6.1	□□□□□ -1.43
ATM-223	ENST00000533979	AKAP8	O43823	692 aa	Known RBP	6.1	□□□□□ -1.43
ATM-223	ENST00000533979	OPHN1	O60890	802 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	FSBP	O95073	299 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	FSHB	P01225	129 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	VSIG10L2	P0DP72	767 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	TACR2	P21452	398 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	ACVRL1	P37023	503 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	KIR2DL3	P43628	341 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	LSS	P48449	732 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	RHBDL3	P58872	404 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	BPIFB4	P59827	614 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	ADAM8	P78325	824 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	EXOSC10	Q01780	885 aa	Known RBP	6.1	□□□□□ -1.43
ATM-223	ENST00000533979	SAFB2	Q14151	953 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
ATM-223	ENST00000533979	NRN1L	Q496H8	165 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	MIIP	Q5JXC2	388 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	SPTY2D1	Q68D10	685 aa	Predicted RBP	6.1	□□□□□ -1.43
ATM-223	ENST00000533979	FAM111B	Q6SJ93	734 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	RNF207	Q6ZRF8	634 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	C1orf210	Q8IVY1	113 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	ZNF808	Q8N4W9	903 aa	Predicted RBP	6.1	□□□□□ -1.43
ATM-223	ENST00000533979	OR2W6P	Q8NHA6	318 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	HIST1H2AH	Q96KK5	128 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	HIST1H2AJ	Q99878	128 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979	NOL10	Q9BSC4	688 aa	Known RBP	6.1	□□□□□ -1.43
ATM-223	ENST00000533979	ZNF703	Q9H7S9	590 aa	Predicted RBP	6.1	□□□□□ -1.43
ATM-223	ENST00000533979	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	6.1	□□□□□ -1.43
ATM-223	ENST00000533979	MAPRE3	Q9UPY8	281 aa		6.1	□□□□□ -1.43
ATM-223	ENST00000533979		A0A0A6YYK5	440 aa	Predicted RBP	6.09	□□□□□ -1.43
ATM-223	ENST00000533979	GSG1L2	A8MUP6	293 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	CYP27B1	O15528	508 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	FKBP9	O95302	570 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	C6	P13671	934 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	ACRV1	P26436	265 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	GDF5	P43026	501 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	EVA1C	P58658	441 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	SEPT7	Q16181	437 aa	Known RBP	6.09	□□□□□ -1.43
ATM-223	ENST00000533979	BRDT	Q58F21	947 aa	Predicted RBP	6.09	□□□□□ -1.43
ATM-223	ENST00000533979	FRMD7	Q6ZUT3	714 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	FKBP9P1	Q75LS8	142 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	GSPT2	Q8IYD1	628 aa	Known RBP	6.09	□□□□□ -1.43
ATM-223	ENST00000533979		Q8N1X5	172 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	ANKRD35	Q8N283	1001 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	SLC16A11	Q8NCK7	471 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	TMEM176A	Q96HP8	235 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	GPR101	Q96P66	508 aa	Predicted RBP	6.09	□□□□□ -1.43
ATM-223	ENST00000533979	SOX7	Q9BT81	388 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	TLR9	Q9NR96	1032 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	SPTLC3	Q9NUV7	552 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	TCEAL9	Q9UHQ7	104 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	DNAI1	Q9UI46	699 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	MSRA	Q9UJ68	235 aa		6.09	□□□□□ -1.43
ATM-223	ENST00000533979	ATP8A1	Q9Y2Q0	1164 aa		6.09	□□□□□ -1.43

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