RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 C2CD5Q86YS7 1000 aa5.8□□□□□ -1.48
ECHDC1-222ENST00000531967 MNS1Q8NEH6 495 aa5.8□□□□□ -1.48
ECHDC1-222ENST00000531967 SPPL3Q8TCT6 385 aa5.8□□□□□ -1.48
ECHDC1-222ENST00000531967 DENND1AQ8TEH3 1009 aa5.8□□□□□ -1.48
ECHDC1-222ENST00000531967 C1orf159Q96HA4 380 aa5.8□□□□□ -1.48
ECHDC1-222ENST00000531967 PNMA5Q96PV4 448 aa5.8□□□□□ -1.48
ECHDC1-222ENST00000531967 FNBP1Q96RU3 617 aa5.8□□□□□ -1.48
ECHDC1-222ENST00000531967 COLEC11Q9BWP8 271 aa5.8□□□□□ -1.48
ECHDC1-222ENST00000531967 BRIP1Q9BX63 1249 aa5.8□□□□□ -1.48
ECHDC1-222ENST00000531967 INTS10Q9NVR2 710 aaKnown RBP5.8□□□□□ -1.48
ECHDC1-222ENST00000531967 DKK3Q9UBP4 350 aa5.8□□□□□ -1.48
ECHDC1-222ENST00000531967 EMC9Q9Y3B6 208 aa5.8□□□□□ -1.48
ECHDC1-222ENST00000531967 GPR45Q9Y5Y3 372 aa5.8□□□□□ -1.48
ECHDC1-222ENST00000531967 CHURC1-FNTBB4DL54 471 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 USP1O94782 785 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 MSL3P1P0C860 447 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 OSMP13725 252 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 TATP17735 454 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 MAPK4P31152 587 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 COPS2P61201 443 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 TFCP2Q12800 502 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 PLS1Q14651 629 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 TMEM201Q5SNT2 666 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 DMRTA1Q5VZB9 504 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 KCNT2Q6UVM3 1135 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 CHD1LQ86WJ1 897 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 RIN2Q8WYP3 895 aaPredicted RBP5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 ST8SIA4Q92187 359 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 MAML1Q92585 1016 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 MUL1Q969V5 352 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 ACAT2Q9BWD1 397 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 GBP3Q9H0R5 595 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 KCND1Q9NSA2 647 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 MOSPD1Q9UJG1 213 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 AKT3Q9Y243 479 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 C2CD2Q9Y426 696 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 TDRD9Q8NDG6 1382 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 ARVCFO00192 962 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 NFKBIEO00221 500 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 SART1O43290 800 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 ERAL1O75616 437 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 SNX4O95219 450 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 EEF1GP26641 437 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 VAMP2P63027 116 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 SRSF2Q01130 221 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 EIF2B5Q13144 721 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 SNAPC2Q13487 334 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 ACVR2BQ13705 512 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 C4orf17Q53FE4 359 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 DCAF15Q66K64 600 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 ACAD10Q6JQN1 1059 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 NOSTRINQ8IVI9 506 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 PLD6Q8N2A8 252 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 NGEFQ8N5V2 710 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 PPM1NQ8N819 430 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 RNF217Q8TC41 542 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 BRF1Q92994 677 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 DDX23Q9BUQ8 820 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 CELF4Q9BZC1 486 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 YY1AP1Q9H869 796 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 RBM28Q9NW13 759 aaKnown RBP5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 TOR4AQ9NXH8 423 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 HPS5Q9UPZ3 1129 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 PIK3R4Q99570 1358 aa5.79□□□□□ -1.48
ECHDC1-222ENST00000531967 EIF4G1Q04637 1599 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 ZBTB43O43298 467 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 MTSS1O43312 755 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 PPM1BO75688 479 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 TMEM63AO94886 807 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 IL18RAPO95256 599 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 PGM3O95394 542 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 MTNR1BP49286 362 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 CEBPAP49715 358 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 PHC1P78364 1004 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 KLHL30Q0D2K2 578 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 DAG1Q14118 895 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 PRSS53Q2L4Q9 553 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 ZNF674Q2M3X9 581 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 ANKRD39Q53RE8 183 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 GNASQ5JWF2 1037 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 FAM26FQ5R3K3 315 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 SLC35F1Q5T1Q4 408 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 UTP14CQ5TAP6 766 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 MAP1SQ66K74 1059 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 NAA16Q6N069 864 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 POMZP3Q6PJE2 187 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 PRPF39Q86UA1 669 aaKnown RBP5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 HERC6Q8IVU3 1022 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 GDAP1Q8TB36 358 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 FBXO30Q8TB52 745 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 SMCR8Q8TEV9 937 aaPredicted RBP5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 DCAF4Q8WV16 495 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 ZNF566Q969W8 418 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 CHFRQ96EP1 664 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 PLPPR2Q96GM1 343 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 TMEM237Q96Q45 408 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 PDCD2LQ9BRP1 358 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 ALG1Q9BT22 464 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 HGH1Q9BTY7 390 aa5.78□□□□□ -1.48
ECHDC1-222ENST00000531967 SENP6Q9GZR1 1112 aaPredicted RBP5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms