RNA–Protein interactions for RNA: ENST00000529898.1

CTR9-205, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-205ENST00000529898 LRRIQ1Q96JM4 1722 aa4.76□□□□□ -1.65
CTR9-205ENST00000529898 OR14A2Q96R54 314 aa4.76□□□□□ -1.65
CTR9-205ENST00000529898 PCED1AQ9H1Q7 454 aa4.76□□□□□ -1.65
CTR9-205ENST00000529898 C12orf65Q9H3J6 166 aaKnown RBP4.76□□□□□ -1.65
CTR9-205ENST00000529898 KANSL2Q9H9L4 492 aa4.76□□□□□ -1.65
CTR9-205ENST00000529898 TNPO3Q9Y5L0 923 aaKnown RBP4.76□□□□□ -1.65
CTR9-205ENST00000529898 HMGXB3Q12766 1538 aa4.76□□□□□ -1.65
CTR9-205ENST00000529898 WDR97A6NE52 1622 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 PCF11O94913 1555 aaKnown RBP4.75□□□□□ -1.65
CTR9-205ENST00000529898 FSD2A1L4K1 749 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 PTPDC1A2A3K4 754 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 KLHL33A6NCF5 533 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 PPP1R12AO14974 1030 aaPredicted RBP4.75□□□□□ -1.65
CTR9-205ENST00000529898 SDSP20132 328 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 POU3F2P20265 443 aaPredicted RBP4.75□□□□□ -1.65
CTR9-205ENST00000529898 ACRV1P26436 265 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 KIF11P52732 1056 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 ANTXR2P58335 489 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 ADAM8P78325 824 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 ROM1Q03395 351 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 BMS1Q14692 1282 aaKnown RBP4.75□□□□□ -1.65
CTR9-205ENST00000529898 ZRSR2Q15696 482 aaKnown RBP4.75□□□□□ -1.65
CTR9-205ENST00000529898 HSP90B2PQ58FF3 399 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 CREB3L3Q68CJ9 461 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 KANSL1Q7Z3B3 1105 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 KIF18BQ86Y91 864 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 FAM9BQ8IZU0 186 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 NGEFQ8N5V2 710 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 LSM14AQ8ND56 463 aaKnown RBP4.75□□□□□ -1.65
CTR9-205ENST00000529898 SH3TC2Q8TF17 1288 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 EXTL1Q92935 676 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 GFM2Q969S9 779 aaKnown RBP4.75□□□□□ -1.65
CTR9-205ENST00000529898 MRFAP1L1Q96HT8 127 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 MPHOSPH9Q99550 1183 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 SLC6A15Q9H2J7 730 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 AURKAIP1Q9NWT8 199 aaPredicted RBP4.75□□□□□ -1.65
CTR9-205ENST00000529898 KCMF1Q9P0J7 381 aa4.75□□□□□ -1.65
CTR9-205ENST00000529898 CTTNBP2Q8WZ74 1663 aa4.74□□□□□ -1.65
CTR9-205ENST00000529898 MAP3K1Q13233 1512 aa4.74□□□□□ -1.65
CTR9-205ENST00000529898 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
CTR9-205ENST00000529898 COQ9O75208 318 aa4.74□□□□□ -1.65
CTR9-205ENST00000529898 H2AFYO75367 372 aaKnown RBP4.74□□□□□ -1.65
CTR9-205ENST00000529898 IPO7O95373 1038 aaKnown RBP4.74□□□□□ -1.65
CTR9-205ENST00000529898 RIPK4P57078 832 aa4.74□□□□□ -1.65
CTR9-205ENST00000529898 ZNF460Q14592 562 aa4.74□□□□□ -1.65
CTR9-205ENST00000529898 GRM7Q14831 915 aa4.74□□□□□ -1.65
CTR9-205ENST00000529898 USP39Q53GS9 565 aaKnown RBP4.74□□□□□ -1.65
CTR9-205ENST00000529898 CDCA2Q69YH5 1023 aaPredicted RBP4.74□□□□□ -1.65
CTR9-205ENST00000529898 USP51Q70EK9 711 aa4.74□□□□□ -1.65
CTR9-205ENST00000529898 BMP8AQ7Z5Y6 402 aa4.74□□□□□ -1.65
CTR9-205ENST00000529898 ZNF808Q8N4W9 903 aaPredicted RBP4.74□□□□□ -1.65
CTR9-205ENST00000529898 SHCBP1Q8NEM2 672 aa4.74□□□□□ -1.65
CTR9-205ENST00000529898 OR14K1Q8NGZ2 314 aa4.74□□□□□ -1.65
CTR9-205ENST00000529898 IL17DQ8TAD2 202 aa4.74□□□□□ -1.65
CTR9-205ENST00000529898 FEZ1Q99689 392 aa4.74□□□□□ -1.65
CTR9-205ENST00000529898 SUDS3Q9H7L9 328 aaPredicted RBP4.74□□□□□ -1.65
CTR9-205ENST00000529898 CABP5Q9NP86 173 aa4.74□□□□□ -1.65
CTR9-205ENST00000529898 SAE1Q9UBE0 346 aaPredicted RBP4.74□□□□□ -1.65
CTR9-205ENST00000529898 MAGEC2Q9UBF1 373 aaPredicted RBP4.74□□□□□ -1.65
CTR9-205ENST00000529898 CADPSQ9ULU8 1353 aa4.74□□□□□ -1.65
CTR9-205ENST00000529898 POLR1AO95602 1720 aaPredicted RBP4.73□□□□□ -1.65
CTR9-205ENST00000529898 CCDC196A0A1B0GTZ2 297 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 UBA6A0AVT1 1052 aaPredicted RBP4.73□□□□□ -1.65
CTR9-205ENST00000529898 C2orf78A6NCI8 922 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 FAM83GA6ND36 823 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 H7C1D1 291 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 OPA1O60313 960 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 MCM5P33992 734 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 MSX2P35548 267 aaPredicted RBP4.73□□□□□ -1.65
CTR9-205ENST00000529898 FLT3P36888 993 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 PEX19P40855 299 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 CD151P48509 253 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 SLC6A3Q01959 620 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 ADCY1Q08828 1119 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 PABPC4Q13310 644 aaKnown RBP eCLIP4.73□□□□□ -1.65
CTR9-205ENST00000529898 ADAM15Q13444 863 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 RIN1Q13671 783 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 SAFB2Q14151 953 aaKnown RBP eCLIP4.73□□□□□ -1.65
CTR9-205ENST00000529898 DGKDQ16760 1214 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 GAGE13Q4V321 117 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 TTC38Q5R3I4 469 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 UBE2R2Q712K3 238 aaPredicted RBP4.73□□□□□ -1.65
CTR9-205ENST00000529898 AMER2Q8N7J2 671 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 KIAA1958Q8N8K9 716 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 OR5AN1Q8NGI8 311 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 CACTINQ8WUQ7 758 aaKnown RBP4.73□□□□□ -1.65
CTR9-205ENST00000529898 UBXN4Q92575 508 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 SLC7A6OSQ96CW6 309 aaPredicted RBP4.73□□□□□ -1.65
CTR9-205ENST00000529898 DRC1Q96MC2 740 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 PITHD1Q9GZP4 211 aaPredicted RBP4.73□□□□□ -1.65
CTR9-205ENST00000529898 ZSWIM4Q9H7M6 989 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 ABCF2Q9UG63 623 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 DENND2AQ9ULE3 1009 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 PAXBP1Q9Y5B6 917 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 SPO11Q9Y5K1 396 aa4.73□□□□□ -1.65
CTR9-205ENST00000529898 NARSO43776 548 aaKnown RBP4.72□□□□□ -1.65
CTR9-205ENST00000529898 EIF3JO75822 258 aaKnown RBP4.72□□□□□ -1.65
CTR9-205ENST00000529898 HSPA5P11021 654 aaKnown RBP4.72□□□□□ -1.65
CTR9-205ENST00000529898 PTX3P26022 381 aaPredicted RBP4.72□□□□□ -1.65
CTR9-205ENST00000529898 BCAR1P56945 870 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms