RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 TTC27Q6P3X3 843 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 POTEGQ6S5H5 508 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 POTEEQ6S8J3 1075 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 TRMT10CQ7L0Y3 403 aaKnown RBP15.79■□□□□ 0.12
CAPN1-214ENST00000528165 TXNRD3Q86VQ6 643 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 TEX9Q8N6V9 391 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 OLIG1Q8TAK6 271 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 GDAP1Q8TB36 358 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 STK33Q9BYT3 514 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 ETNK1Q9HBU6 452 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 COG5Q9UP83 839 aa15.79■□□□□ 0.12
CAPN1-214ENST00000528165 THRAP3Q9Y2W1 955 aaKnown RBP15.79■□□□□ 0.12
CAPN1-214ENST00000528165 ANKRD62A6NC57 917 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 PDE6BP35913 854 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 SKIV2L2P42285 1042 aaKnown RBP15.78■□□□□ 0.12
CAPN1-214ENST00000528165 ABL2P42684 1182 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 GIT2Q14161 759 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 SEL1L2Q5TEA6 688 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 EGFL6Q8IUX8 553 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 SPDYE1Q8NFV5 336 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-214ENST00000528165 FBF1Q8TES7 1133 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 CKAP2Q8WWK9 683 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 ART4Q93070 314 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 RMDN2Q96LZ7 410 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 ARHGEF10LQ9HCE6 1279 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 DNAJC12Q9UKB3 198 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 PTPN22Q9Y2R2 807 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 PFASO15067 1338 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 A6NHS1 94 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 CLIC2O15247 247 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 MED24O75448 989 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 CCNB1P14635 433 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 CTNNA2P26232 953 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 MKRN3Q13064 507 aaKnown RBP15.78■□□□□ 0.12
CAPN1-214ENST00000528165 CALCOCO2Q13137 446 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 ASPRV1Q53RT3 343 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 TRIM68Q6AZZ1 485 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 PPP1R18Q6NYC8 613 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 VSTM1Q6UX27 236 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 RHOT2Q8IXI1 618 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 ZBTB10Q96DT7 871 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 SERPINB12Q96P63 405 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 TGS1Q96RS0 853 aaKnown RBP15.78■□□□□ 0.12
CAPN1-214ENST00000528165 GPCPD1Q9NPB8 672 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 PRKAG3Q9UGI9 489 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 PCDHA3Q9Y5H8 950 aa15.78■□□□□ 0.12
CAPN1-214ENST00000528165 ACSL3O95573 720 aa15.77■□□□□ 0.12
CAPN1-214ENST00000528165 LINGO3P0C6S8 592 aa15.77■□□□□ 0.12
CAPN1-214ENST00000528165 CREB1P16220 341 aa15.77■□□□□ 0.12
CAPN1-214ENST00000528165 PPP4CP60510 307 aa15.77■□□□□ 0.12
CAPN1-214ENST00000528165 EPM2AIP1Q7L775 607 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-214ENST00000528165 WDR66Q8TBY9 1149 aa15.77■□□□□ 0.12
CAPN1-214ENST00000528165 PARD3BQ8TEW8 1205 aa15.77■□□□□ 0.12
CAPN1-214ENST00000528165 NAP1L4Q99733 375 aaKnown RBP15.77■□□□□ 0.12
CAPN1-214ENST00000528165 REEP2Q9BRK0 252 aa15.77■□□□□ 0.12
CAPN1-214ENST00000528165 TAS2R14Q9NYV8 317 aa15.77■□□□□ 0.12
CAPN1-214ENST00000528165 ASTN1O14525 1302 aa15.77■□□□□ 0.12
CAPN1-214ENST00000528165 PASKQ96RG2 1323 aa15.77■□□□□ 0.12
CAPN1-214ENST00000528165 TMEM110-MUSTN1A8MSY1 372 aa15.77■□□□□ 0.11
CAPN1-214ENST00000528165 SLC26A4O43511 780 aa15.77■□□□□ 0.11
CAPN1-214ENST00000528165 UNC5CO95185 931 aa15.77■□□□□ 0.11
CAPN1-214ENST00000528165 GGPS1O95749 300 aa15.77■□□□□ 0.11
CAPN1-214ENST00000528165 STX2P32856 288 aa15.77■□□□□ 0.11
CAPN1-214ENST00000528165 RFC4P35249 363 aa15.77■□□□□ 0.11
CAPN1-214ENST00000528165 STAT3P40763 770 aa15.77■□□□□ 0.11
CAPN1-214ENST00000528165 CLK2P49760 499 aaKnown RBP15.77■□□□□ 0.11
CAPN1-214ENST00000528165 PABPC4Q13310 644 aaKnown RBP eCLIP15.77■□□□□ 0.117e-7■■□□□ 12
CAPN1-214ENST00000528165 CYFIP1Q7L576 1253 aa15.77■□□□□ 0.11
CAPN1-214ENST00000528165 KRT35Q92764 455 aa15.77■□□□□ 0.11
CAPN1-214ENST00000528165 DDX23Q9BUQ8 820 aaKnown RBP15.77■□□□□ 0.11
CAPN1-214ENST00000528165 TXLNGQ9NUQ3 528 aa15.77■□□□□ 0.11
CAPN1-214ENST00000528165 USP40Q9NVE5 1235 aa15.77■□□□□ 0.11
CAPN1-214ENST00000528165 CTTNBP2NLQ9P2B4 639 aa15.77■□□□□ 0.11
CAPN1-214ENST00000528165 MTUS1Q9ULD2 1270 aa15.77■□□□□ 0.11
CAPN1-214ENST00000528165 PNMA6FA0A0J9YX94 578 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 NLRP3Q96P20 1036 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 ZSWIM1Q9BR11 485 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 CDC42EP4Q9H3Q1 356 aaKnown RBP15.76■□□□□ 0.11
CAPN1-214ENST00000528165 EIF4E1BA6NMX2 242 aaKnown RBP15.76■□□□□ 0.11
CAPN1-214ENST00000528165 ANKRD63C9JTQ0 380 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 GCNT3O95395 438 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 LDHCP07864 332 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 ALAS1P13196 640 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 MARCKSL1P49006 195 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 RBBP5Q15291 538 aaKnown RBP15.76■□□□□ 0.11
CAPN1-214ENST00000528165 RNF43Q68DV7 783 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 SYT11Q9BT88 431 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 DNM3Q9UQ16 869 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 NAV1Q8NEY1 1877 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 TTLL1O95922 423 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 BRAFP15056 766 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 ATP4AP20648 1035 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 COILP38432 576 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-214ENST00000528165 INHBEP58166 350 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 C11orf63Q6NUN7 778 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 BICDL1Q6ZP65 573 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 MAEAQ7L5Y9 396 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 FAM186BQ8IYM0 893 aa15.76■□□□□ 0.11
CAPN1-214ENST00000528165 LRRC47Q8N1G4 583 aaKnown RBP15.76■□□□□ 0.11
CAPN1-214ENST00000528165 PSTPIP2Q9H939 334 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms