RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 RSPH3Q86UC2 560 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 ZNF410Q86VK4 478 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 MAP4K3Q8IVH8 894 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 FAM114A1Q8IWE2 563 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 CSGALNACT2Q8N6G5 542 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 ANKRD20A12PQ8NF67 263 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 PPP1R13LQ8WUF5 828 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 NLRP7Q8WX94 980 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 KCNN1Q92952 543 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 BICD1Q96G01 975 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 NTPCRQ9BSD7 190 aaKnown RBP9.84□□□□□ -0.83
CSMD1-208ENST00000520561 SEZ6LQ9BYH1 1024 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 FAM49AQ9H0Q0 323 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-208ENST00000520561 GBP3Q9H0R5 595 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 KCTD10Q9H3F6 313 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 SEMA6BQ9H3T3 888 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 TMEM134Q9H6X4 195 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 CGNQ9P2M7 1197 aaKnown RBP9.84□□□□□ -0.83
CSMD1-208ENST00000520561 MAGEC2Q9UBF1 373 aaPredicted RBP9.84□□□□□ -0.83
CSMD1-208ENST00000520561 OGDHLQ9ULD0 1010 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 TBX20Q9UMR3 447 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 NOD1Q9Y239 953 aa9.84□□□□□ -0.83
CSMD1-208ENST00000520561 K7ERI5 159 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 PDXKO00764 312 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 VTNP04004 478 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 PRKCBP05771 671 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 GJB1P08034 283 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 SRGAP2CP0DJJ0 459 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 RPL13P26373 211 aaKnown RBP9.83□□□□□ -0.84
CSMD1-208ENST00000520561 GPC3P51654 580 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 PMS1P54277 932 aaKnown RBP9.83□□□□□ -0.84
CSMD1-208ENST00000520561 SNRPFP62306 86 aaKnown RBP9.83□□□□□ -0.84
CSMD1-208ENST00000520561 ADAM17P78536 824 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 PLCB2Q00722 1185 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 MAPK6Q16659 721 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 EDRF1Q3B7T1 1238 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 ZCWPW2Q504Y3 356 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 ANKRD40Q6AI12 368 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 GDF6Q6KF10 455 aaPredicted RBP9.83□□□□□ -0.84
CSMD1-208ENST00000520561 RUFY4Q6ZNE9 571 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 KSR1Q8IVT5 923 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 ZNF710Q8N1W2 664 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 ANP32BQ92688 251 aaKnown RBP9.83□□□□□ -0.84
CSMD1-208ENST00000520561 CEP63Q96MT8 703 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 PPP1R16BQ96T49 567 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 STRA6Q9BX79 667 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 NFKBIZQ9BYH8 718 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 THAP9Q9H5L6 903 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 PRDM10Q9NQV6 1147 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 TRAF3IP3Q9Y228 551 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 KAT6AQ92794 2004 aa9.83□□□□□ -0.84
CSMD1-208ENST00000520561 A0A087WZ62 844 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 INO80B-WBP1J3KQ70 363 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 HNRNPDLO14979 420 aaKnown RBP9.82□□□□□ -0.84
CSMD1-208ENST00000520561 CETN3O15182 167 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 SGPL1O95470 568 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 TFRCP02786 760 aaKnown RBP9.82□□□□□ -0.84
CSMD1-208ENST00000520561 TPM2P07951 284 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 CDK11BP21127 795 aaKnown RBP9.82□□□□□ -0.84
CSMD1-208ENST00000520561 NR2F2P24468 414 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 LIG4P49917 911 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 PTENP60484 403 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 ZNF200P98182 395 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-208ENST00000520561 FKBP3Q00688 224 aaKnown RBP9.82□□□□□ -0.84
CSMD1-208ENST00000520561 POU5F1BQ06416 359 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 KCNA1Q09470 495 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 HIC1Q14526 733 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 HSP90AA2PQ14568 343 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-208ENST00000520561 PTGISQ16647 500 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 NFIL3Q16649 462 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 TMEM132AQ24JP5 1023 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 ARMCX5Q6P1M9 558 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 IFNLR1Q8IU57 520 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-208ENST00000520561 KIAA0319LQ8IZA0 1049 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 NME8Q8N427 588 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 U2AF1L4Q8WU68 220 aaKnown RBP9.82□□□□□ -0.84
CSMD1-208ENST00000520561 DNAJB3Q8WWF6 145 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 MED15Q96RN5 788 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 DUSP9Q99956 384 aaKnown RBP9.82□□□□□ -0.84
CSMD1-208ENST00000520561 FDXACB1Q9BRP7 624 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-208ENST00000520561 SRRTQ9BXP5 876 aaKnown RBP9.82□□□□□ -0.84
CSMD1-208ENST00000520561 MRPL4Q9BYD3 311 aaKnown RBP9.82□□□□□ -0.84
CSMD1-208ENST00000520561 GCOM2Q9BZD3 368 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-208ENST00000520561 INO80BQ9C086 356 aaPredicted RBP9.82□□□□□ -0.84
CSMD1-208ENST00000520561 CRISPLD2Q9H0B8 497 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 AGPAT3Q9NRZ7 376 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 FANCLQ9NW38 375 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 GINS2Q9Y248 185 aa9.82□□□□□ -0.84
CSMD1-208ENST00000520561 KCNJ18B7U540 433 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 ARVCFO00192 962 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 TGFB1I1O43294 461 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 ERLIN2O94905 339 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 GNA14O95837 355 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 SERPINC1P01008 464 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 PIGRP01833 764 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 NR3C1P04150 777 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 CAPN2P17655 700 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 EEF1GP26641 437 aaKnown RBP9.81□□□□□ -0.84
CSMD1-208ENST00000520561 HOXD13P35453 343 aa9.81□□□□□ -0.84
CSMD1-208ENST00000520561 CYP2J2P51589 502 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms