RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 DGKIO75912 1065 aa24.33■■□□□ 1.49
VEGFA-217ENST00000518538 ERLIN2O94905 339 aa24.33■■□□□ 1.49
VEGFA-217ENST00000518538 TAP1Q03518 808 aa24.33■■□□□ 1.49
VEGFA-217ENST00000518538 ZBTB8OSQ8IWT0 167 aa24.33■■□□□ 1.49
VEGFA-217ENST00000518538 TRAIPQ9BWF2 469 aa24.33■■□□□ 1.49
VEGFA-217ENST00000518538 C2orf40Q9H1Z8 148 aa24.33■■□□□ 1.49
VEGFA-217ENST00000518538 ELAC1Q9H777 363 aaKnown RBP24.33■■□□□ 1.49
VEGFA-217ENST00000518538 RC3H2Q9HBD1 1191 aaKnown RBP24.33■■□□□ 1.49
VEGFA-217ENST00000518538 POLD4Q9HCU8 107 aa24.33■■□□□ 1.49
VEGFA-217ENST00000518538 MTMR10Q9NXD2 777 aa24.33■■□□□ 1.49
VEGFA-217ENST00000518538 STK17AQ9UEE5 414 aa24.33■■□□□ 1.49
VEGFA-217ENST00000518538 RCOR1Q9UKL0 485 aa24.33■■□□□ 1.49
VEGFA-217ENST00000518538 ARHGEF15O94989 841 aa24.32■■□□□ 1.48
VEGFA-217ENST00000518538 KRT85P78386 507 aa24.32■■□□□ 1.48
VEGFA-217ENST00000518538 NUCB2P80303 420 aa24.32■■□□□ 1.48
VEGFA-217ENST00000518538 MAPK7Q13164 816 aa24.32■■□□□ 1.48
VEGFA-217ENST00000518538 RRAGBQ5VZM2 374 aa24.32■■□□□ 1.48
VEGFA-217ENST00000518538 DAW1Q8N136 415 aa24.32■■□□□ 1.48
VEGFA-217ENST00000518538 DEPTORQ8TB45 409 aa24.32■■□□□ 1.48
VEGFA-217ENST00000518538 LARP4BQ92615 738 aaKnown RBP24.32■■□□□ 1.48
VEGFA-217ENST00000518538 ZNF689Q96CS4 500 aaPredicted RBP24.32■■□□□ 1.48
VEGFA-217ENST00000518538 C17orf75Q9HAS0 396 aa24.32■■□□□ 1.48
VEGFA-217ENST00000518538 TMEM161AQ9NX61 479 aa24.32■■□□□ 1.48
VEGFA-217ENST00000518538 A0A0U1RQF3 1178 aa24.31■■□□□ 1.48
VEGFA-217ENST00000518538 LINC01553A4QN01 128 aa24.31■■□□□ 1.48
VEGFA-217ENST00000518538 TSPAN1O60635 241 aa24.31■■□□□ 1.48
VEGFA-217ENST00000518538 AXLP30530 894 aa24.31■■□□□ 1.48
VEGFA-217ENST00000518538 HOXA11P31270 313 aaPredicted RBP24.31■■□□□ 1.48
VEGFA-217ENST00000518538 ME1P48163 572 aa24.31■■□□□ 1.48
VEGFA-217ENST00000518538 MCM6Q14566 821 aa24.31■■□□□ 1.48
VEGFA-217ENST00000518538 AXDND1Q5T1B0 1012 aaPredicted RBP24.31■■□□□ 1.48
VEGFA-217ENST00000518538 TWF2Q6IBS0 349 aaKnown RBP24.31■■□□□ 1.48
VEGFA-217ENST00000518538 CCDC73Q6ZRK6 1079 aa24.31■■□□□ 1.48
VEGFA-217ENST00000518538 GPBP1Q86WP2 473 aa24.31■■□□□ 1.48
VEGFA-217ENST00000518538 ECHDC2Q86YB7 292 aa24.31■■□□□ 1.48
VEGFA-217ENST00000518538 ADGRA3Q8IWK6 1321 aa24.31■■□□□ 1.48
VEGFA-217ENST00000518538 NCLP19338 710 aaKnown RBP24.3■■□□□ 1.48
VEGFA-217ENST00000518538 IBSPP21815 317 aaPredicted RBP24.3■■□□□ 1.48
VEGFA-217ENST00000518538 ANP32AP39687 249 aaKnown RBP24.3■■□□□ 1.48
VEGFA-217ENST00000518538 NCBP1Q09161 790 aaKnown RBP24.3■■□□□ 1.48
VEGFA-217ENST00000518538 DMP1Q13316 513 aaPredicted RBP24.3■■□□□ 1.48
VEGFA-217ENST00000518538 DHX8Q14562 1220 aaKnown RBP24.3■■□□□ 1.48
VEGFA-217ENST00000518538 GRIN2CQ14957 1233 aa24.3■■□□□ 1.48
VEGFA-217ENST00000518538 AMHR2Q16671 573 aa24.3■■□□□ 1.48
VEGFA-217ENST00000518538 ARSHQ5FYA8 562 aa24.3■■□□□ 1.48
VEGFA-217ENST00000518538 PCDHA7Q9UN72 937 aa24.3■■□□□ 1.48
VEGFA-217ENST00000518538 SKIP12755 728 aa24.29■■□□□ 1.48
VEGFA-217ENST00000518538 RAB27AP51159 221 aa24.29■■□□□ 1.48
VEGFA-217ENST00000518538 PEX3P56589 373 aa24.29■■□□□ 1.48
VEGFA-217ENST00000518538 RAD51AP2Q09MP3 1159 aa24.29■■□□□ 1.48
VEGFA-217ENST00000518538 FAM187BQ17R55 369 aa24.29■■□□□ 1.48
VEGFA-217ENST00000518538 NAALADL2Q58DX5 795 aa24.29■■□□□ 1.48
VEGFA-217ENST00000518538 SHC4Q6S5L8 630 aa24.29■■□□□ 1.48
VEGFA-217ENST00000518538 PPP4R3CPQ6ZMV5 832 aa24.29■■□□□ 1.48
VEGFA-217ENST00000518538 PRIMPOLQ96LW4 560 aa24.29■■□□□ 1.48
VEGFA-217ENST00000518538 GUCD1Q96NT3 240 aa24.29■■□□□ 1.48
VEGFA-217ENST00000518538 FZD8Q9H461 694 aa24.29■■□□□ 1.48
VEGFA-217ENST00000518538 FAM105AQ9NUU6 356 aa24.29■■□□□ 1.48
VEGFA-217ENST00000518538 PRMT7Q9NVM4 692 aaPredicted RBP24.29■■□□□ 1.48
VEGFA-217ENST00000518538 ODF2LQ9ULJ1 636 aa24.29■■□□□ 1.48
VEGFA-217ENST00000518538 SZT2Q5T011 3432 aa24.28■■□□□ 1.48
VEGFA-217ENST00000518538 A0A087X0B3 334 aa24.28■■□□□ 1.48
VEGFA-217ENST00000518538 EOMESO95936 686 aa24.28■■□□□ 1.48
VEGFA-217ENST00000518538 STAT6P42226 847 aa24.28■■□□□ 1.48
VEGFA-217ENST00000518538 NPTX2P47972 431 aa24.28■■□□□ 1.48
VEGFA-217ENST00000518538 EFNA5P52803 228 aa24.28■■□□□ 1.48
VEGFA-217ENST00000518538 NOTUMQ6P988 496 aa24.28■■□□□ 1.48
VEGFA-217ENST00000518538 CMTR2Q8IYT2 770 aaKnown RBP24.28■■□□□ 1.48
VEGFA-217ENST00000518538 LEO1Q8WVC0 666 aaPredicted RBP24.28■■□□□ 1.48
VEGFA-217ENST00000518538 CCDC51Q96ER9 411 aa24.28■■□□□ 1.48
VEGFA-217ENST00000518538 CHAMP1Q96JM3 812 aa24.28■■□□□ 1.48
VEGFA-217ENST00000518538 SPATA32Q96LK8 384 aa24.28■■□□□ 1.48
VEGFA-217ENST00000518538 TGS1Q96RS0 853 aaKnown RBP24.28■■□□□ 1.48
VEGFA-217ENST00000518538 KIFC3Q9BVG8 833 aa24.28■■□□□ 1.48
VEGFA-217ENST00000518538 CCDC113Q9H0I3 377 aa24.28■■□□□ 1.48
VEGFA-217ENST00000518538 NPHP3-ACAD11A0A0J9YXS1 232 aa24.27■■□□□ 1.48
VEGFA-217ENST00000518538 CCDC169A6NNP5 214 aa24.27■■□□□ 1.48
VEGFA-217ENST00000518538 SFI1A8K8P3 1242 aa24.27■■□□□ 1.48
VEGFA-217ENST00000518538 HOXA2O43364 376 aa24.27■■□□□ 1.48
VEGFA-217ENST00000518538 PLS3P13797 630 aa24.27■■□□□ 1.48
VEGFA-217ENST00000518538 ATF7P17544 494 aaPredicted RBP24.27■■□□□ 1.48
VEGFA-217ENST00000518538 ARF4P18085 180 aaPredicted RBP24.27■■□□□ 1.48
VEGFA-217ENST00000518538 ERVK-21P61565 698 aa24.27■■□□□ 1.48
VEGFA-217ENST00000518538 BTG3Q14201 252 aaPredicted RBP24.27■■□□□ 1.48
VEGFA-217ENST00000518538 MAPK6Q16659 721 aa24.27■■□□□ 1.48
VEGFA-217ENST00000518538 ZNF598Q86UK7 904 aaKnown RBP24.27■■□□□ 1.48
VEGFA-217ENST00000518538 FIBCD1Q8N539 461 aa24.27■■□□□ 1.48
VEGFA-217ENST00000518538 CPB2Q96IY4 423 aa24.27■■□□□ 1.48
VEGFA-217ENST00000518538 REEP2Q9BRK0 252 aa24.27■■□□□ 1.48
VEGFA-217ENST00000518538 KCNG1Q9UIX4 513 aa24.27■■□□□ 1.48
VEGFA-217ENST00000518538 B4GALT5O43286 388 aa24.26■■□□□ 1.47
VEGFA-217ENST00000518538 ZNF623O75123 536 aa24.26■■□□□ 1.47
VEGFA-217ENST00000518538 PRKCBP05771 671 aa24.26■■□□□ 1.47
VEGFA-217ENST00000518538 FGFR1P11362 822 aa24.26■■□□□ 1.47
VEGFA-217ENST00000518538 GATMP50440 423 aa24.26■■□□□ 1.47
VEGFA-217ENST00000518538 CACNB1Q02641 598 aaPredicted RBP24.26■■□□□ 1.47
VEGFA-217ENST00000518538 UBXN11Q5T124 520 aa24.26■■□□□ 1.47
VEGFA-217ENST00000518538 SPRED2Q7Z698 418 aa24.26■■□□□ 1.47
VEGFA-217ENST00000518538 PDILTQ8N807 584 aa24.26■■□□□ 1.47
VEGFA-217ENST00000518538 SPIRE2Q8WWL2 714 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms