RNA–Protein interactions for RNA: ENST00000516881.1

SCARNA15-202, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15-202ENST00000516881 POLR3BQ9NW08 1133 aaPredicted RBP2.1□□□□□ -2.07
SCARNA15-202ENST00000516881 RNF181Q9P0P0 153 aa2.1□□□□□ -2.07
SCARNA15-202ENST00000516881 PFDN2Q9UHV9 154 aa2.1□□□□□ -2.07
SCARNA15-202ENST00000516881 TLK1Q9UKI8 766 aa2.1□□□□□ -2.07
SCARNA15-202ENST00000516881 SYNPO2Q9UMS6 1093 aa2.1□□□□□ -2.07
SCARNA15-202ENST00000516881 COL11A2P13942 1736 aaPredicted RBP2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 DNAJC9-AS1A6NH13 148 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 CCDC85CA6NKD9 419 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 ZNF185O15231 689 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 HOXA3O43365 443 aaPredicted RBP2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 DNAJC6O75061 913 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 APOL3O95236 402 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 ITGAMP11215 1152 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 VAMP1P23763 118 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 SDHAP31040 664 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 KIR2DL3P43628 341 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 ZNF81P51508 661 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 RNASE9P60153 205 aaKnown RBP2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 IRF9Q00978 393 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 GUCY1B3Q02153 619 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 FOXI1Q12951 378 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 VPS72Q15906 364 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 FAM209AQ5JX71 171 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 NAIF1Q69YI7 327 aaPredicted RBP2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 GDF7Q7Z4P5 450 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 CLEC14AQ86T13 490 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 FAM83AQ86UY5 434 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 XYLT1Q86Y38 959 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 ARHGEF19Q8IW93 802 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 LILRA3Q8N6C8 439 aaPredicted RBP2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 C2orf69Q8N8R5 385 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 GLB1L3Q8NCI6 653 aaPredicted RBP2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 CPEB3Q8NE35 698 aaKnown RBP2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 ST13P5Q8NFI4 369 aaPredicted RBP2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 NKD2Q969F2 451 aaPredicted RBP2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 E2F7Q96AV8 911 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 FOXB1Q99853 325 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 LRFN3Q9BTN0 628 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 NDC1Q9BTX1 674 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 SPATA9Q9BWV2 254 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 ING3Q9NXR8 418 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 NDOR1Q9UHB4 597 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 MAP3K2Q9Y2U5 619 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 B3GALT1Q9Y5Z6 326 aa2.09□□□□□ -2.07
SCARNA15-202ENST00000516881 UBA6A0AVT1 1052 aaPredicted RBP2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 TMEM200CA6NKL6 621 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 LEFTY2O00292 366 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 CFBP00751 764 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 PRLP01236 227 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 IGLV2-14P01704 120 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 ERCC5P28715 1186 aaPredicted RBP2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 CASRP41180 1078 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 RGS19P49795 217 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 KRTAP10-7P60409 375 aaPredicted RBP2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 GABREP78334 506 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 SRSF4Q08170 494 aaKnown RBP2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 TP53BP2Q13625 1128 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 IQSEC1Q6DN90 963 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 SPATC1Q76KD6 591 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 RTN4RL1Q86UN2 441 aaPredicted RBP2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 DLG3Q92796 817 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 RPGRQ92834 1020 aaKnown RBP2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 FOXRED1Q96CU9 486 aaPredicted RBP2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 MAML3Q96JK9 1138 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 DCLRE1CQ96SD1 692 aaKnown RBP2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 DUSP26Q9BV47 211 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 BRIP1Q9BX63 1249 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 TRIM55Q9BYV6 548 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 CPEB1Q9BZB8 566 aaKnown RBP2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 KCMF1Q9P0J7 381 aa2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 WDR3Q9UNX4 943 aaKnown RBP eCLIP2.08□□□□□ -2.08
SCARNA15-202ENST00000516881 PIPSLA2A3N6 862 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 PRR5-ARHGAP8B1AHC4 643 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 DIAPH1O60610 1272 aaKnown RBP2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 MAFO75444 373 aaPredicted RBP2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 ESRRBO95718 433 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 HLA-DOAP06340 250 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 C6orf222P0C671 652 aaPredicted RBP2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 HSP90B1P14625 803 aaKnown RBP2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 TYRP1P17643 537 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 DDX6P26196 483 aaKnown RBP eCLIP2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 KIF11P52732 1056 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 MXRA7P84157 204 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 NHLH2Q02577 135 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 ARID5AQ03989 594 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 SSRP1Q08945 709 aaKnown RBP2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 MPP3Q13368 585 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 MTERF2Q49AM1 385 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 TTC38Q5R3I4 469 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 FOXB2Q5VYV0 432 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 OVCH1Q7RTY7 1134 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 PLXDC1Q8IUK5 500 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 SRRM1Q8IYB3 904 aaKnown RBP2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 ASB10Q8WXI3 467 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 LINC00476Q8WZB0 136 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 MAGEB10Q96LZ2 347 aaPredicted RBP2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 COQ10AQ96MF6 247 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 ZNF778Q96MU6 729 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 TEX101Q9BY14 249 aa2.07□□□□□ -2.08
SCARNA15-202ENST00000516881 HAPLN2Q9GZV7 340 aa2.07□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms