RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 HADHBP55084 474 aaKnown RBP16.11■□□□□ 0.17
NUP54-217ENST00000514987 PPFIA1Q13136 1202 aa16.11■□□□□ 0.17
NUP54-217ENST00000514987 MTMR2Q13614 643 aa16.11■□□□□ 0.17
NUP54-217ENST00000514987 TCEAL1Q15170 157 aa16.11■□□□□ 0.17
NUP54-217ENST00000514987 PPP2R5EQ16537 467 aa16.11■□□□□ 0.17
NUP54-217ENST00000514987 USP37Q86T82 979 aa16.11■□□□□ 0.17
NUP54-217ENST00000514987 GSPT2Q8IYD1 628 aaKnown RBP16.11■□□□□ 0.17
NUP54-217ENST00000514987 SCYL3Q8IZE3 742 aa16.11■□□□□ 0.17
NUP54-217ENST00000514987 KIFAP3Q92845 792 aa16.11■□□□□ 0.17
NUP54-217ENST00000514987 HES6Q96HZ4 224 aa16.11■□□□□ 0.17
NUP54-217ENST00000514987 CDHR1Q96JP9 859 aa16.11■□□□□ 0.17
NUP54-217ENST00000514987 RUFY1Q96T51 708 aa16.11■□□□□ 0.17
NUP54-217ENST00000514987 KRT12Q99456 494 aa16.11■□□□□ 0.17
NUP54-217ENST00000514987 GPR88Q9GZN0 384 aa16.11■□□□□ 0.17
NUP54-217ENST00000514987 HOMER2Q9NSB8 354 aa16.11■□□□□ 0.17
NUP54-217ENST00000514987 HSPBP1Q9NZL4 362 aa16.11■□□□□ 0.17
NUP54-217ENST00000514987 KCNG1Q9UIX4 513 aa16.11■□□□□ 0.17
NUP54-217ENST00000514987 TTC7AQ9ULT0 858 aaPredicted RBP16.11■□□□□ 0.17
NUP54-217ENST00000514987 EMSYQ7Z589 1322 aa16.11■□□□□ 0.17
NUP54-217ENST00000514987 ANKRD62A6NC57 917 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 TMCO5BA8MYB1 307 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 PFASO15067 1338 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 STAM2O75886 525 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 CAPN2P17655 700 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 BACE1P56817 501 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 GUCY2DQ02846 1103 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 CUL1Q13616 776 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 PLS1Q14651 629 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 EPC2Q52LR7 807 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 XKR9Q5GH70 373 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 PHLDB3Q6NSJ2 640 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 DAAM2Q86T65 1068 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 NT5DC3Q86UY8 548 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 GLYCTKQ8IVS8 523 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 RHOT2Q8IXI1 618 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 SPIRE2Q8WWL2 714 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 PKNOX2Q96KN3 472 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 NAP1L3Q99457 506 aaPredicted RBP16.1■□□□□ 0.17
NUP54-217ENST00000514987 AGPAT1Q99943 283 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 MOV10L1Q9BXT6 1211 aaKnown RBP16.1■□□□□ 0.17
NUP54-217ENST00000514987 SLITRK6Q9H5Y7 841 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 EPB41L5Q9HCM4 733 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 RNF146Q9NTX7 359 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 ZNF112Q9UJU3 913 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 PACSIN2Q9UNF0 486 aaPredicted RBP16.1■□□□□ 0.17
NUP54-217ENST00000514987 PCDHA10Q9Y5I2 948 aa16.1■□□□□ 0.17
NUP54-217ENST00000514987 LTBP3Q9NS15 1303 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 A6NNZ2 444 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 C19orf81C9J6K1 198 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 AGPSO00116 658 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 IVLP07476 585 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 DNA2P51530 1060 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 PEX3P56589 373 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 TUBB8Q3ZCM7 444 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 NSMFQ6X4W1 530 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 MAEAQ7L5Y9 396 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 VSIG10LQ86VR7 867 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 METTL13Q8N6R0 699 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 RDH13Q8NBN7 331 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 ATP6V0A1Q93050 837 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 C12orf42Q96LP6 360 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 SH3GL2Q99962 352 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 UBE2TQ9NPD8 197 aaPredicted RBP16.09■□□□□ 0.17
NUP54-217ENST00000514987 PICK1Q9NRD5 415 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 PARP14Q460N5 1801 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 NFASCO94856 1347 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 H0YCG3 227 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 BACH1O14867 736 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 PHACTR2O75167 634 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 GLI1P08151 1106 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 SCP2P22307 547 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 GTF2H1P32780 548 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 RTP1P59025 263 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 SPP2Q13103 211 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 DMP1Q13316 513 aaPredicted RBP16.09■□□□□ 0.17
NUP54-217ENST00000514987 ZSCAN26Q16670 478 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 ARHGAP44Q17R89 818 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 POTEAQ6S8J7 498 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 ZNF280CQ8ND82 737 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 CCDC26Q8TAB7 109 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 OLIG1Q8TAK6 271 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 FAM76AQ8TAV0 307 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 SLC35G2Q8TBE7 412 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 TMC2Q8TDI7 906 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 NSUN6Q8TEA1 469 aaKnown RBP16.09■□□□□ 0.17
NUP54-217ENST00000514987 GDAP1L1Q96MZ0 367 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 CBWD1Q9BRT8 395 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 NTPCRQ9BSD7 190 aaKnown RBP16.09■□□□□ 0.17
NUP54-217ENST00000514987 PCIF1Q9H4Z3 704 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 TAF1DQ9H5J8 278 aaPredicted RBP16.09■□□□□ 0.17
NUP54-217ENST00000514987 HACL1Q9UJ83 578 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 TBX20Q9UMR3 447 aa16.09■□□□□ 0.17
NUP54-217ENST00000514987 TESPA1A2RU30 521 aaPredicted RBP16.08■□□□□ 0.16
NUP54-217ENST00000514987 GOLGA6CA6NDK9 693 aa16.08■□□□□ 0.16
NUP54-217ENST00000514987 FOXN3O00409 490 aaPredicted RBP16.08■□□□□ 0.16
NUP54-217ENST00000514987 SLC16A4O15374 487 aa16.08■□□□□ 0.16
NUP54-217ENST00000514987 GOLGA6DP0CG33 693 aa16.08■□□□□ 0.16
NUP54-217ENST00000514987 ZBTB48P10074 688 aaPredicted RBP16.08■□□□□ 0.16
NUP54-217ENST00000514987 MXI1P50539 228 aa16.08■□□□□ 0.16
NUP54-217ENST00000514987 PPATQ06203 517 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms