RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 INO80BQ9C086 356 aaPredicted RBP13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 CCDC113Q9H0I3 377 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 FAM49AQ9H0Q0 323 aaPredicted RBP13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 KMT5AQ9NQR1 393 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 MAN1B1Q9UKM7 699 aa13.21□□□□□ -0.29
PDLIM5-220ENST00000514830 ADGRA3Q8IWK6 1321 aa13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 EVI5O60447 810 aa13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 PQBP1O60828 265 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 VTNP04004 478 aa13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 CKBP12277 381 aa13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 NLRP11P59045 1033 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 STK4Q13043 487 aa13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 CT47A1Q5JQC4 288 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 FOXR2Q6PJQ5 311 aa13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 TRAF7Q6Q0C0 670 aa13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 HAUS6Q7Z4H7 955 aa13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 ZBTB8OSQ8IWT0 167 aa13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 GUF1Q8N442 669 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 USP38Q8NB14 1042 aa13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 RNF149Q8NC42 400 aa13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 KIAA0895Q8NCT3 520 aa13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 ZNF507Q8TCN5 953 aa13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 PRIMPOLQ96LW4 560 aa13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 NOC4LQ9BVI4 516 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 GCOM2Q9BZD3 368 aaPredicted RBP13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 MRPL44Q9H9J2 332 aaKnown RBP13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 PCDHB13Q9Y5F0 798 aa13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 TRPV2Q9Y5S1 764 aa13.2□□□□□ -0.3
PDLIM5-220ENST00000514830 LTBP2Q14767 1821 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 A0A087WZ62 844 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 LRRIQ4A6NIV6 560 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 M0QZ92 97 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 KIAA0355O15063 1070 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 KIF20AO95235 890 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 CHRNA1P02708 482 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 CLTBP09497 229 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 DARSP14868 501 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 SELPP16109 830 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 BMP6P22004 513 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 EIF4BP23588 611 aaKnown RBP13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 THPOP40225 353 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 ZSCAN23Q3MJ62 389 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 KSR1Q8IVT5 923 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 MLKLQ8NB16 471 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 DEPTORQ8TB45 409 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 TMEM174Q8WUU8 243 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 ERCC4Q92889 916 aaPredicted RBP13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 FDXACB1Q9BRP7 624 aaPredicted RBP13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 FZD8Q9H461 694 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 ZHX3Q9H4I2 956 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 POLD4Q9HCU8 107 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 CDY2AQ9Y6F7 541 aa13.19□□□□□ -0.3
PDLIM5-220ENST00000514830 CCDC169A6NNP5 214 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 K7ENM7 598 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 DLL1O00548 723 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 SLC16A4O15374 487 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 PIGRP01833 764 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 SRGAP2CP0DJJ0 459 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 NMT1P30419 496 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 CASP5P51878 434 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 NLRP12P59046 1061 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 SNRPFP62306 86 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 MBTD1Q05BQ5 628 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 KIZQ2M2Z5 673 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 L1TD1Q5T7N2 865 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 ZNF618Q5T7W0 954 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 TAS1R3Q7RTX0 852 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 MAP4K3Q8IVH8 894 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 ADSSL1Q8N142 457 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 SCFD1Q8WVM8 642 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 NLRP7Q8WX94 980 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 NLRP4Q96MN2 994 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 ANP32EQ9BTT0 268 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 FUCA2Q9BTY2 467 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 TMEM206Q9H813 350 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 SLC39A2Q9NP94 309 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 PRMT7Q9NVM4 692 aaPredicted RBP13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 TBX20Q9UMR3 447 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 ATP11BQ9Y2G3 1177 aa13.18□□□□□ -0.3
PDLIM5-220ENST00000514830 SCN5AQ14524 2016 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 DENND3A2RUS2 1198 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 K7ERI5 159 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 ACKR2O00590 384 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 GCNT3O95395 438 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 AXLP30530 894 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 RFC2P35250 354 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 C1QBPQ07021 282 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 MAPK6Q16659 721 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 AMHR2Q16671 573 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 FBXO47Q5MNV8 452 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 SASS6Q6UVJ0 657 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 ZPBP2Q6X784 338 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 LRRC8DQ7L1W4 858 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 MYOCDQ8IZQ8 938 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 HPS3Q969F9 1004 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 ACCSQ96QU6 501 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 FGFBP2Q9BYJ0 223 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 HIPK3Q9H422 1215 aa13.17□□□□□ -0.3
PDLIM5-220ENST00000514830 CDHR5Q9HBB8 845 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms