RNA–Protein interactions for RNA: ENST00000512482.1

COL6A5-204, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 5

Gene COL6A5, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-204ENST00000512482 SNX21Q969T3 373 aa4.41□□□□□ -1.7
COL6A5-204ENST00000512482 TBATAQ96M53 351 aa4.41□□□□□ -1.7
COL6A5-204ENST00000512482 PAIP2Q9BPZ3 127 aaKnown RBP4.41□□□□□ -1.7
COL6A5-204ENST00000512482 JAM3Q9BX67 310 aa4.41□□□□□ -1.7
COL6A5-204ENST00000512482 CDIP1Q9H305 208 aa4.41□□□□□ -1.7
COL6A5-204ENST00000512482 PRDM11Q9NQV5 511 aa4.41□□□□□ -1.7
COL6A5-204ENST00000512482 RASSF1Q9NS23 344 aa4.41□□□□□ -1.7
COL6A5-204ENST00000512482 SEL1LQ9UBV2 794 aa4.41□□□□□ -1.7
COL6A5-204ENST00000512482 TBK1Q9UHD2 729 aa4.41□□□□□ -1.7
COL6A5-204ENST00000512482 PNMA8BQ9ULN7 279 aaPredicted RBP4.41□□□□□ -1.7
COL6A5-204ENST00000512482 IKBKGQ9Y6K9 419 aa4.41□□□□□ -1.7
COL6A5-204ENST00000512482 PHLDB1Q86UU1 1377 aa4.41□□□□□ -1.7
COL6A5-204ENST00000512482 TMEM110-MUSTN1A8MSY1 372 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 GOLGA6L22H0YM25 854 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 AQP7O14520 342 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 HTATSF1O43719 755 aaKnown RBP4.4□□□□□ -1.7
COL6A5-204ENST00000512482 TMCC2O75069 709 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 CELA3BP08861 270 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 ZSCAN20P17040 1043 aaPredicted RBP4.4□□□□□ -1.7
COL6A5-204ENST00000512482 CAPN3P20807 821 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 KRT83P78385 493 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 SATB1Q01826 763 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 TRIM29Q14134 588 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 SAFBQ15424 915 aaKnown RBP eCLIP4.4□□□□□ -1.7
COL6A5-204ENST00000512482 SKOR2Q2VWA4 1001 aaPredicted RBP4.4□□□□□ -1.7
COL6A5-204ENST00000512482 EMC4Q5J8M3 183 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 HIBCHQ6NVY1 386 aaPredicted RBP4.4□□□□□ -1.7
COL6A5-204ENST00000512482 MCM10Q7L590 875 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 MIB1Q86YT6 1006 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 SP8Q8IXZ3 490 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 WDR66Q8TBY9 1149 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 TAF4BQ92750 862 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 CHMP4CQ96CF2 233 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 YIPF4Q9BSR8 244 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 SMOC1Q9H4F8 434 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 KIAA1586Q9HCI6 787 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 PCDH18Q9HCL0 1135 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 ALG13Q9NP73 1137 aaKnown RBP4.4□□□□□ -1.7
COL6A5-204ENST00000512482 SLC6A20Q9NP91 592 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 BLOC1S4Q9NUP1 217 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 MRGBPQ9NV56 204 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 PHTF1Q9UMS5 762 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 PMF1-BGLAPU3KQ54 211 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 GPRASP1Q5JY77 1395 aa4.4□□□□□ -1.7
COL6A5-204ENST00000512482 FAM47E-STBD1D6RA91 191 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 H0Y3Z8 333 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 TPPPO94811 219 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 CCDC159P0C7I6 412 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 ATF7P17544 494 aaPredicted RBP4.4□□□□□ -1.71
COL6A5-204ENST00000512482 GRK2P25098 689 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 GRK3P35626 688 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 RAD52P43351 418 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 CCT5P48643 541 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 GABREP78334 506 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 ITKQ08881 620 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 PKN2Q16513 984 aaKnown RBP4.4□□□□□ -1.71
COL6A5-204ENST00000512482 TUBB8Q3ZCM7 444 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 PARP10Q53GL7 1025 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 FAM180BQ6P0A1 224 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 ASXL2Q76L83 1435 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 RTL10Q7L3V2 364 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 PRRT2Q7Z6L0 340 aaPredicted RBP4.4□□□□□ -1.71
COL6A5-204ENST00000512482 ZC3H18Q86VM9 953 aaKnown RBP4.4□□□□□ -1.71
COL6A5-204ENST00000512482 IQCF2Q8IXL9 164 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 SMARCC2Q8TAQ2 1214 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 PHOSPHO1Q8TCT1 267 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 PARD3BQ8TEW8 1205 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 N4BP2L2Q92802 583 aaPredicted RBP4.4□□□□□ -1.71
COL6A5-204ENST00000512482 KISS1RQ969F8 398 aaPredicted RBP4.4□□□□□ -1.71
COL6A5-204ENST00000512482 DDX11Q96FC9 970 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 EXOC2Q96KP1 924 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 ZMAT2Q96NC0 199 aaKnown RBP4.4□□□□□ -1.71
COL6A5-204ENST00000512482 FAM210AQ96ND0 272 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 ALG1Q9BT22 464 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 POLR3CQ9BUI4 534 aaPredicted RBP4.4□□□□□ -1.71
COL6A5-204ENST00000512482 YY1AP1Q9H869 796 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 ZCCHC17Q9NP64 241 aaKnown RBP4.4□□□□□ -1.71
COL6A5-204ENST00000512482 PPARGC1AQ9UBK2 798 aaKnown RBP4.4□□□□□ -1.71
COL6A5-204ENST00000512482 SUN2Q9UH99 717 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 TPCN1Q9ULQ1 816 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 TRAF6Q9Y4K3 522 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 AFG3L2Q9Y4W6 797 aa4.4□□□□□ -1.71
COL6A5-204ENST00000512482 ABHD14A-ACY1A0A1B0GW23 586 aa4.39□□□□□ -1.71
COL6A5-204ENST00000512482 CPLX1O14810 134 aa4.39□□□□□ -1.71
COL6A5-204ENST00000512482 KIF5CO60282 957 aa4.39□□□□□ -1.71
COL6A5-204ENST00000512482 PLOD3O60568 738 aa4.39□□□□□ -1.71
COL6A5-204ENST00000512482 CNOT4O95628 575 aaKnown RBP4.39□□□□□ -1.71
COL6A5-204ENST00000512482 SOD2P04179 222 aa4.39□□□□□ -1.71
COL6A5-204ENST00000512482 SPIRE1Q08AE8 756 aa4.39□□□□□ -1.71
COL6A5-204ENST00000512482 PRKG2Q13237 762 aa4.39□□□□□ -1.71
COL6A5-204ENST00000512482 MFSD4BQ5TF39 518 aa4.39□□□□□ -1.71
COL6A5-204ENST00000512482 AGAP9Q5VTM2 703 aa4.39□□□□□ -1.71
COL6A5-204ENST00000512482 CXorf57Q6NSI4 855 aaKnown RBP4.39□□□□□ -1.71
COL6A5-204ENST00000512482 CYP4F22Q6NT55 531 aa4.39□□□□□ -1.71
COL6A5-204ENST00000512482 XRRA1Q6P2D8 792 aa4.39□□□□□ -1.71
COL6A5-204ENST00000512482 CD300LDQ6UXZ3 194 aa4.39□□□□□ -1.71
COL6A5-204ENST00000512482 UNC5DQ6UXZ4 953 aa4.39□□□□□ -1.71
COL6A5-204ENST00000512482 LDHAL6AQ6ZMR3 332 aa4.39□□□□□ -1.71
COL6A5-204ENST00000512482 OTUD6AQ7L8S5 288 aa4.39□□□□□ -1.71
COL6A5-204ENST00000512482 STRA8Q7Z7C7 330 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms