RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 RHOT2Q8IXI1 618 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 GMLQ99445 158 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 THAP2Q9H0W7 228 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 CARD9Q9H257 536 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 UBE2TQ9NPD8 197 aaPredicted RBP19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 PPP1R9AQ9ULJ8 1098 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 ZHX2Q9Y6X8 837 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 RPTORQ8N122 1335 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 IGSF9BQ9UPX0 1349 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 CORO7P57737 925 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 EMC10Q5UCC4 262 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 LARGE2Q8N3Y3 721 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 LMO3Q8TAP4 145 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 GLIS2Q9BZE0 524 aaPredicted RBP19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 FAM114A2Q9NRY5 505 aa19.42■□□□□ 0.7
CCHCR1-228ENST00000509552 DDX3YO15523 660 aaKnown RBP19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 MYZAPP0CAP1 466 aa19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 PLS3P13797 630 aa19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 QARSP47897 775 aaKnown RBP19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 PRPF4BQ13523 1007 aaKnown RBP19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 FAM83AQ86UY5 434 aa19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 C12orf56Q8IXR9 622 aa19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 TMEM174Q8WUU8 243 aa19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 ARHGEF26Q96DR7 871 aa19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 GOLGA6L10A0A0M3HER8 536 aa19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 TTI1O43156 1089 aa19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 DAPK3O43293 454 aa19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 CTNNA1P35221 906 aaKnown RBP19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 MAGEA9P43362 315 aa19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 DLG4P78352 724 aa19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 RTKN2Q8IZC4 609 aa19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 XXYLT1Q8NBI6 393 aa19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 PROCA1Q8NCQ7 364 aaPredicted RBP19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 TMBIM4Q9HC24 238 aa19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 TAS2R14Q9NYV8 317 aa19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 ZBTB12Q9Y330 459 aaPredicted RBP19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 PSME4Q14997 1843 aa19.41■□□□□ 0.7
CCHCR1-228ENST00000509552 DHX15O43143 795 aaKnown RBP19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 RARRES1P49788 294 aa19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 SLC20A2Q08357 652 aa19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 TKFCQ3LXA3 575 aa19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 CDAN1Q8IWY9 1227 aa19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 PRPF38AQ8NAV1 312 aaKnown RBP19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 RNPC3Q96LT9 517 aaKnown RBP19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 RAB17Q9H0T7 212 aa19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 AGO4Q9HCK5 861 aaKnown RBP19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 COL20A1Q9P218 1284 aa19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 ZNF536O15090 1300 aa19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 NFIBO00712 420 aa19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 INPP5BP32019 993 aa19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 SEC14L1Q92503 715 aa19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 IWS1Q96ST2 819 aa19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 NEUROG2Q9H2A3 272 aa19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 RABEP2Q9H5N1 569 aa19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 HSPBP1Q9NZL4 362 aa19.4■□□□□ 0.7
CCHCR1-228ENST00000509552 NDUFAB1O14561 156 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 ZEB2O60315 1214 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 GCLMP48507 274 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 SNRPFP62306 86 aaKnown RBP19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 PPP3CAQ08209 521 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 ITGB3BPQ13352 177 aaPredicted RBP19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 MTMR1Q13613 665 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 PCNX4Q63HM2 1172 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 RUFY4Q6ZNE9 571 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 ARFGAP2Q8N6H7 521 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 IL31RAQ8NI17 732 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 UBLCP1Q8WVY7 318 aaPredicted RBP19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 CBWD1Q9BRT8 395 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 TIPINQ9BVW5 301 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 ZNF341Q9BYN7 854 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 CENPHQ9H3R5 247 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 TBC1D22BQ9NU19 505 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 UBIAD1Q9Y5Z9 338 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 PFASO15067 1338 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 MAPK13O15264 365 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 LYPLA2O95372 231 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 HADHBP55084 474 aaKnown RBP19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 PTENP60484 403 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 EPC2Q52LR7 807 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 HAUS6Q7Z4H7 955 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 PALB2Q86YC2 1186 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 ARHGEF19Q8IW93 802 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 EFCAB13Q8IY85 973 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 SLC20A1Q8WUM9 679 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 CLEC4DQ8WXI8 215 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 PSMD1Q99460 953 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 CELF4Q9BZC1 486 aaKnown RBP19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 CTTNBP2NLQ9P2B4 639 aa19.39■□□□□ 0.69
CCHCR1-228ENST00000509552 TISP43B9A030 160 aa19.38■□□□□ 0.69
CCHCR1-228ENST00000509552 ALAS1P13196 640 aa19.38■□□□□ 0.69
CCHCR1-228ENST00000509552 YWHABP31946 246 aaKnown RBP19.38■□□□□ 0.69
CCHCR1-228ENST00000509552 GTF2BQ00403 316 aa19.38■□□□□ 0.69
CCHCR1-228ENST00000509552 UAP1Q16222 522 aaPredicted RBP19.38■□□□□ 0.69
CCHCR1-228ENST00000509552 DCAF12L1Q5VU92 463 aa19.38■□□□□ 0.69
CCHCR1-228ENST00000509552 NAA35Q5VZE5 725 aa19.38■□□□□ 0.69
CCHCR1-228ENST00000509552 ST6GALNAC4Q9H4F1 302 aa19.38■□□□□ 0.69
CCHCR1-228ENST00000509552 TCEAL9Q9UHQ7 104 aa19.38■□□□□ 0.69
CCHCR1-228ENST00000509552 COG5Q9UP83 839 aa19.38■□□□□ 0.69
CCHCR1-228ENST00000509552 MIF4GDA9UHW6 222 aaKnown RBP19.37■□□□□ 0.69
CCHCR1-228ENST00000509552 FTLP02792 175 aaPredicted RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms