RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 NKX2-4Q9H2Z4 354 aa22.32■■□□□ 1.16
HOXC6-204ENST00000509328 C17orf75Q9HAS0 396 aa22.32■■□□□ 1.16
HOXC6-204ENST00000509328 POLD4Q9HCU8 107 aa22.32■■□□□ 1.16
HOXC6-204ENST00000509328 AGPAT5Q9NUQ2 364 aa22.32■■□□□ 1.16
HOXC6-204ENST00000509328 CIZ1Q9ULV3 898 aaPredicted RBP22.32■■□□□ 1.16
HOXC6-204ENST00000509328 INSL6Q9Y581 213 aa22.32■■□□□ 1.16
HOXC6-204ENST00000509328 ERLIN2O94905 339 aa22.31■■□□□ 1.16
HOXC6-204ENST00000509328 STAT6P42226 847 aa22.31■■□□□ 1.16
HOXC6-204ENST00000509328 MBTD1Q05BQ5 628 aa22.31■■□□□ 1.16
HOXC6-204ENST00000509328 MAPK7Q13164 816 aa22.31■■□□□ 1.16
HOXC6-204ENST00000509328 DHX8Q14562 1220 aaKnown RBP22.31■■□□□ 1.16
HOXC6-204ENST00000509328 ARSHQ5FYA8 562 aa22.31■■□□□ 1.16
HOXC6-204ENST00000509328 ZNF697Q5TEC3 545 aa22.31■■□□□ 1.16
HOXC6-204ENST00000509328 DAW1Q8N136 415 aa22.31■■□□□ 1.16
HOXC6-204ENST00000509328 CRIPAKQ8N1N5 446 aa22.31■■□□□ 1.16
HOXC6-204ENST00000509328 DEPTORQ8TB45 409 aa22.31■■□□□ 1.16
HOXC6-204ENST00000509328 LRFN2Q9ULH4 789 aa22.31■■□□□ 1.16
HOXC6-204ENST00000509328 PIN4Q9Y237 131 aaKnown RBP22.31■■□□□ 1.16
HOXC6-204ENST00000509328 A0A087X0B3 334 aa22.3■■□□□ 1.16
HOXC6-204ENST00000509328 FAM189BP81408 668 aa22.3■■□□□ 1.16
HOXC6-204ENST00000509328 RAD51AP2Q09MP3 1159 aa22.3■■□□□ 1.16
HOXC6-204ENST00000509328 NAALADL2Q58DX5 795 aa22.3■■□□□ 1.16
HOXC6-204ENST00000509328 YME1L1Q96TA2 773 aa22.3■■□□□ 1.16
HOXC6-204ENST00000509328 PANK2Q9BZ23 570 aa22.3■■□□□ 1.16
HOXC6-204ENST00000509328 SLC28A3Q9HAS3 691 aa22.3■■□□□ 1.16
HOXC6-204ENST00000509328 ODF2LQ9ULJ1 636 aa22.3■■□□□ 1.16
HOXC6-204ENST00000509328 PCDHB7Q9Y5E2 793 aa22.3■■□□□ 1.16
HOXC6-204ENST00000509328 FNDC1Q4ZHG4 1894 aaPredicted RBP22.3■■□□□ 1.16
HOXC6-204ENST00000509328 COL4A6Q14031 1691 aa22.3■■□□□ 1.16
HOXC6-204ENST00000509328 CA3P07451 260 aa22.29■■□□□ 1.16
HOXC6-204ENST00000509328 AXLP30530 894 aa22.29■■□□□ 1.16
HOXC6-204ENST00000509328 NCBP1Q09161 790 aaKnown RBP22.29■■□□□ 1.16
HOXC6-204ENST00000509328 DMP1Q13316 513 aaPredicted RBP22.29■■□□□ 1.16
HOXC6-204ENST00000509328 PDILTQ8N807 584 aa22.29■■□□□ 1.16
HOXC6-204ENST00000509328 TRAIPQ9BWF2 469 aa22.29■■□□□ 1.16
HOXC6-204ENST00000509328 ELAC1Q9H777 363 aaKnown RBP22.29■■□□□ 1.16
HOXC6-204ENST00000509328 FAM13BQ9NYF5 915 aa22.29■■□□□ 1.16
HOXC6-204ENST00000509328 KCNG1Q9UIX4 513 aa22.29■■□□□ 1.16
HOXC6-204ENST00000509328 NLRC5Q86WI3 1866 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 NPHP3-ACAD11A0A0J9YXS1 232 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 A0A0U1RQF3 1178 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 TSPAN1O60635 241 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 DGKIO75912 1065 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 KRT18P05783 430 aaKnown RBP22.28■■□□□ 1.16
HOXC6-204ENST00000509328 NPTX2P47972 431 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 EFNA5P52803 228 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 PEX3P56589 373 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 AMHR2Q16671 573 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 FAM187BQ17R55 369 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 RESP18Q5W5W9 173 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 PPP2R2DQ66LE6 453 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 TWF2Q6IBS0 349 aaKnown RBP22.28■■□□□ 1.16
HOXC6-204ENST00000509328 PPP4R3CPQ6ZMV5 832 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 SV2BQ7L1I2 683 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 PRIMPOLQ96LW4 560 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 REEP2Q9BRK0 252 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 FZD8Q9H461 694 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 ZNF576Q9H609 170 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 PRMT7Q9NVM4 692 aaPredicted RBP22.28■■□□□ 1.16
HOXC6-204ENST00000509328 TMEM161AQ9NX61 479 aa22.28■■□□□ 1.16
HOXC6-204ENST00000509328 LCHNA4D1U4 455 aa22.27■■□□□ 1.16
HOXC6-204ENST00000509328 CCDC169A6NNP5 214 aa22.27■■□□□ 1.16
HOXC6-204ENST00000509328 SFI1A8K8P3 1242 aa22.27■■□□□ 1.16
HOXC6-204ENST00000509328 SKIP12755 728 aa22.27■■□□□ 1.16
HOXC6-204ENST00000509328 PLS3P13797 630 aa22.27■■□□□ 1.16
HOXC6-204ENST00000509328 IBSPP21815 317 aaPredicted RBP22.27■■□□□ 1.16
HOXC6-204ENST00000509328 HOXA11P31270 313 aaPredicted RBP22.27■■□□□ 1.16
HOXC6-204ENST00000509328 MAPK6Q16659 721 aa22.27■■□□□ 1.16
HOXC6-204ENST00000509328 RALGAPA2Q2PPJ7 1873 aa22.27■■□□□ 1.16
HOXC6-204ENST00000509328 ADALQ6DHV7 355 aa22.27■■□□□ 1.16
HOXC6-204ENST00000509328 ECHDC2Q86YB7 292 aa22.27■■□□□ 1.16
HOXC6-204ENST00000509328 SP7Q8TDD2 431 aaPredicted RBP22.27■■□□□ 1.16
HOXC6-204ENST00000509328 CCDC51Q96ER9 411 aa22.27■■□□□ 1.16
HOXC6-204ENST00000509328 CCDC113Q9H0I3 377 aa22.27■■□□□ 1.16
HOXC6-204ENST00000509328 TTYH1Q9H313 450 aaPredicted RBP22.27■■□□□ 1.16
HOXC6-204ENST00000509328 SEMA6BQ9H3T3 888 aa22.27■■□□□ 1.16
HOXC6-204ENST00000509328 CUEDC2Q9H467 287 aa22.27■■□□□ 1.16
HOXC6-204ENST00000509328 RC3H2Q9HBD1 1191 aaKnown RBP22.27■■□□□ 1.16
HOXC6-204ENST00000509328 KMT5AQ9NQR1 393 aa22.27■■□□□ 1.16
HOXC6-204ENST00000509328 ADGRA3Q8IWK6 1321 aa22.27■■□□□ 1.16
HOXC6-204ENST00000509328 EOMESO95936 686 aa22.26■■□□□ 1.15
HOXC6-204ENST00000509328 RAB27AP51159 221 aa22.26■■□□□ 1.15
HOXC6-204ENST00000509328 CACNB1Q02641 598 aaPredicted RBP22.26■■□□□ 1.15
HOXC6-204ENST00000509328 GIT2Q14161 759 aa22.26■■□□□ 1.15
HOXC6-204ENST00000509328 E2F4Q16254 413 aa22.26■■□□□ 1.15
HOXC6-204ENST00000509328 NOTUMQ6P988 496 aa22.26■■□□□ 1.15
HOXC6-204ENST00000509328 Q7L0L9 218 aa22.26■■□□□ 1.15
HOXC6-204ENST00000509328 DEFB123Q8N688 67 aa22.26■■□□□ 1.15
HOXC6-204ENST00000509328 IQUBQ8NA54 791 aa22.26■■□□□ 1.15
HOXC6-204ENST00000509328 SPIRE2Q8WWL2 714 aa22.26■■□□□ 1.15
HOXC6-204ENST00000509328 ZNF689Q96CS4 500 aaPredicted RBP22.26■■□□□ 1.15
HOXC6-204ENST00000509328 NTPCRQ9BSD7 190 aaKnown RBP22.26■■□□□ 1.15
HOXC6-204ENST00000509328 KIFC3Q9BVG8 833 aa22.26■■□□□ 1.15
HOXC6-204ENST00000509328 LARSQ9P2J5 1176 aaKnown RBP22.26■■□□□ 1.15
HOXC6-204ENST00000509328 RBM19Q9Y4C8 960 aaKnown RBP22.26■■□□□ 1.15
HOXC6-204ENST00000509328 PHLPP2Q6ZVD8 1323 aa22.26■■□□□ 1.15
HOXC6-204ENST00000509328 SZT2Q5T011 3432 aa22.25■■□□□ 1.15
HOXC6-204ENST00000509328 FAM13AO94988 1023 aa22.25■■□□□ 1.15
HOXC6-204ENST00000509328 PRKCBP05771 671 aa22.25■■□□□ 1.15
HOXC6-204ENST00000509328 ARF4P18085 180 aaPredicted RBP22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms