RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 MICU3Q86XE3 530 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 RAB11FIP4Q86YS3 637 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 LRRC71Q8N4P6 559 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 FEZF2Q8TBJ5 459 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 ZNF577Q9BSK1 485 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 RTKNQ9BST9 563 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 RHOBTB2Q9BYZ6 727 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 NRDE2Q9H7Z3 1164 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 BARHL2Q9NY43 387 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 NCDNQ9UBB6 729 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 GABBR1Q9UBS5 961 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 STK39Q9UEW8 545 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 FBXL21Q9UKT6 434 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 PATJQ8NI35 1801 aa10.62□□□□□ -0.71
NEDD9-211ENST00000508546 TDRD15B5MCY1 1934 aaKnown RBP10.62□□□□□ -0.71
NEDD9-211ENST00000508546 CNOT1A5YKK6 2376 aaKnown RBP10.61□□□□□ -0.71
NEDD9-211ENST00000508546 MYH15Q9Y2K3 1946 aa10.61□□□□□ -0.71
NEDD9-211ENST00000508546 ZNF862O60290 1169 aa10.61□□□□□ -0.71
NEDD9-211ENST00000508546 SKIP12755 728 aa10.61□□□□□ -0.71
NEDD9-211ENST00000508546 PHKA2P46019 1235 aa10.61□□□□□ -0.71
NEDD9-211ENST00000508546 CLCN4P51793 760 aa10.61□□□□□ -0.71
NEDD9-211ENST00000508546 CDC42EP1Q00587 391 aa10.61□□□□□ -0.71
NEDD9-211ENST00000508546 PTPN14Q15678 1187 aa10.61□□□□□ -0.71
NEDD9-211ENST00000508546 LETM2Q2VYF4 491 aa10.61□□□□□ -0.71
NEDD9-211ENST00000508546 PPM1JQ5JR12 505 aa10.61□□□□□ -0.71
NEDD9-211ENST00000508546 APOA5Q6Q788 366 aa10.61□□□□□ -0.71
NEDD9-211ENST00000508546 SYNE3Q6ZMZ3 975 aa10.61□□□□□ -0.71
NEDD9-211ENST00000508546 CMASQ8NFW8 434 aaPredicted RBP10.61□□□□□ -0.71
NEDD9-211ENST00000508546 BCL7CQ8WUZ0 217 aaPredicted RBP10.61□□□□□ -0.71
NEDD9-211ENST00000508546 EMILIN2Q9BXX0 1053 aa10.61□□□□□ -0.71
NEDD9-211ENST00000508546 NRBP2Q9NSY0 501 aa10.61□□□□□ -0.71
NEDD9-211ENST00000508546 TBC1D13Q9NVG8 400 aa10.61□□□□□ -0.71
NEDD9-211ENST00000508546 TCEAL9Q9UHQ7 104 aa10.61□□□□□ -0.71
NEDD9-211ENST00000508546 GCN1Q92616 2671 aaKnown RBP10.6□□□□□ -0.71
NEDD9-211ENST00000508546 KRBA1A5PL33 1030 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 POTEMA6NI47 508 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 WDR64B1ANS9 1081 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 LILRB3O75022 631 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 ZNF623O75123 536 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 OATP04181 439 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 FGFR4P22455 802 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 TBC1D8BQ0IIM8 1120 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 NONOQ15233 471 aaKnown RBP eCLIP10.6□□□□□ -0.71
NEDD9-211ENST00000508546 NOMO2Q5JPE7 1267 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 JAKMIP3Q5VZ66 844 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 POTEGQ6S5H5 508 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 GLB1LQ6UWU2 654 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 CYP26C1Q6V0L0 522 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 NLRP7Q8WX94 980 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 NXPE3Q969Y0 559 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 ZNF668Q96K58 619 aaPredicted RBP10.6□□□□□ -0.71
NEDD9-211ENST00000508546 SCLT1Q96NL6 688 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 KLHL5Q96PQ7 755 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 VN1R3Q9BXE9 311 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 LRRC2Q9BYS8 371 aa10.6□□□□□ -0.71
NEDD9-211ENST00000508546 GCOM2Q9BZD3 368 aaPredicted RBP10.6□□□□□ -0.71
NEDD9-211ENST00000508546 V9GY48 417 aaPredicted RBP10.6□□□□□ -0.71
NEDD9-211ENST00000508546 MAST4O15021 2626 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 ESYT2A0FGR8 921 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 SPDYE4A6NLX3 237 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 PRR5-ARHGAP8B1AHC4 643 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 SLC27A2O14975 620 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 NARSO43776 548 aaKnown RBP10.59□□□□□ -0.71
NEDD9-211ENST00000508546 KINO60870 393 aaKnown RBP10.59□□□□□ -0.71
NEDD9-211ENST00000508546 N4BP1O75113 896 aaKnown RBP10.59□□□□□ -0.71
NEDD9-211ENST00000508546 OFD1O75665 1012 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 CNPP09543 421 aaKnown RBP10.59□□□□□ -0.71
NEDD9-211ENST00000508546 KLRC2P26717 231 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 CIITAP33076 1130 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 SLC11A1P49279 550 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 RAB27AP51159 221 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 ARHGAP8P85298 464 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 PRKCEQ02156 737 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 RNASELQ05823 741 aaKnown RBP10.59□□□□□ -0.71
NEDD9-211ENST00000508546 NECTIN1Q15223 517 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 TARBP2Q15633 366 aaKnown RBP10.59□□□□□ -0.71
NEDD9-211ENST00000508546 RTN1Q16799 776 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 SPECC1Q5M775 1068 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 VARS2Q5ST30 1063 aaKnown RBP10.59□□□□□ -0.71
NEDD9-211ENST00000508546 TWF2Q6IBS0 349 aaKnown RBP10.59□□□□□ -0.71
NEDD9-211ENST00000508546 PHLDB3Q6NSJ2 640 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 STAMQ92783 540 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 LPPQ93052 612 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 INO80BQ9C086 356 aaPredicted RBP10.59□□□□□ -0.71
NEDD9-211ENST00000508546 LSG1Q9H089 658 aaKnown RBP10.59□□□□□ -0.71
NEDD9-211ENST00000508546 ZMYND12Q9H0C1 365 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 WDR6Q9NNW5 1121 aaKnown RBP10.59□□□□□ -0.71
NEDD9-211ENST00000508546 ASH1LQ9NR48 2969 aaKnown RBP10.59□□□□□ -0.71
NEDD9-211ENST00000508546 DISC1Q9NRI5 854 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 FAM105AQ9NUU6 356 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 EPS15L1Q9UBC2 864 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 DNAJB4Q9UDY4 337 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 SAMM50Q9Y512 469 aa10.59□□□□□ -0.71
NEDD9-211ENST00000508546 COL4A3Q01955 1670 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 IGKV6-21A0A0C4DH24 114 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 MEIS3P2A8K0S8 358 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 STK25O00506 426 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 CSDE1O75534 798 aaKnown RBP10.58□□□□□ -0.72
NEDD9-211ENST00000508546 PAPLNO95428 1278 aa10.58□□□□□ -0.72
NEDD9-211ENST00000508546 DCNP07585 359 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms