RNA–Protein interactions for RNA: ENST00000508164.5

TSPAN17-207, Transcript of tetraspanin 17, humanhuman

TSL 1 (best) BASIC

Gene TSPAN17, Length 2,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-207ENST00000508164 ECE2O60344 883 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 ALDH1B1P30837 517 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 ZNF131P52739 623 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 PLTPP55058 493 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 AGBL2Q5U5Z8 902 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 ARHGEF19Q8IW93 802 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 CNPY4Q8N129 248 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 PRPF38AQ8NAV1 312 aaKnown RBP23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 ZSWIM2Q8NEG5 633 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 LMO3Q8TAP4 145 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 C18orf8Q96DM3 657 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 CSRNP1Q96S65 589 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 CARD9Q9H257 536 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 DAAM1Q9Y4D1 1078 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 ANKRD62A6NC57 917 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 HIP1RO75146 1068 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 CAND2O75155 1236 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 FSBPO95073 299 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 KRT13P13646 458 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 ZYXQ15942 572 aaKnown RBP23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 DUPD1Q68J44 220 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 DAW1Q8N136 415 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 AGPAT1Q99943 283 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 SH2D3AQ9BRG2 576 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 ERP44Q9BS26 406 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 LXNQ9BS40 222 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 ZNF577Q9BSK1 485 aa23.24■■□□□ 1.31
TSPAN17-207ENST00000508164 PPFIA2O75334 1257 aa23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 POLR2MP0CAP2 368 aa23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 SPRED3Q2MJR0 410 aa23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 STRIP1Q5VSL9 837 aa23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 C6orf89Q6UWU4 347 aa23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 NACC1Q96RE7 527 aa23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 TXLNGYQ9BZA5 131 aa23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 RAB17Q9H0T7 212 aa23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 EPB41L4BQ9H329 900 aa23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 ZDHHC18Q9NUE0 388 aa23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 CTTNBP2NLQ9P2B4 639 aa23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 EMSYQ7Z589 1322 aa23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 FTLP02792 175 aaPredicted RBP23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 CEP55Q53EZ4 464 aa23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 SUGP1Q8IWZ8 645 aaKnown RBP23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 KAT5Q92993 513 aa23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 PRMT6Q96LA8 375 aaPredicted RBP23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 ACP6Q9NPH0 428 aa23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 PNMA2Q9UL42 364 aa23.23■■□□□ 1.31
TSPAN17-207ENST00000508164 SMIM23A6NLE4 172 aa23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 PHF20L1A8MW92 1017 aa23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 VCAM1P19320 739 aa23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 USP8P40818 1118 aa23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 PPP2R5AQ15172 486 aa23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 TBC1D10BQ4KMP7 808 aaPredicted RBP23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 TRMT1LQ7Z2T5 733 aaKnown RBP23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 YTHDF3Q7Z739 585 aaKnown RBP23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 CPNE8Q86YQ8 564 aa23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 JAMLQ86YT9 394 aa23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 ZDHHC14Q8IZN3 488 aa23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 FBXO25Q8TCJ0 367 aa23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 K7ENM7 598 aa23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 ATMINO43313 823 aaPredicted RBP23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 GCLMP48507 274 aa23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 PPP3CAQ08209 521 aa23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 MAPK7Q13164 816 aa23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 KIF22Q14807 665 aa23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 SLC27A3Q5K4L6 730 aa23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 UHMK1Q8TAS1 419 aaKnown RBP23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 PSMD1Q99460 953 aa23.22■■□□□ 1.31
TSPAN17-207ENST00000508164 GOLGA6L10A0A0M3HER8 536 aa23.21■■□□□ 1.31
TSPAN17-207ENST00000508164 SF3A3Q12874 501 aaKnown RBP eCLIP23.21■■□□□ 1.319e-7■■■■□ 24.7
TSPAN17-207ENST00000508164 SEL1LQ9UBV2 794 aa23.21■■□□□ 1.31
TSPAN17-207ENST00000508164 TLDC2A0PJX2 215 aa23.21■■□□□ 1.31
TSPAN17-207ENST00000508164 ARHGEF35A5YM69 484 aa23.21■■□□□ 1.31
TSPAN17-207ENST00000508164 RPUSD2Q8IZ73 545 aaKnown RBP23.21■■□□□ 1.31
TSPAN17-207ENST00000508164 CBWD1Q9BRT8 395 aa23.21■■□□□ 1.31
TSPAN17-207ENST00000508164 CCDC172P0C7W6 258 aa23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 MNAT1P51948 309 aa23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 ZDHHC24Q6UX98 284 aa23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 STXBP4Q6ZWJ1 553 aa23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 CCDC13Q8IYE1 715 aa23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 RNF25Q96BH1 459 aaPredicted RBP23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 MASTLQ96GX5 879 aa23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 MRIQ9BWK5 157 aa23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 ODF2LQ9ULJ1 636 aa23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 RBBP6Q7Z6E9 1792 aaKnown RBP23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 SRRM3A6NNA2 597 aaPredicted RBP23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 MESDQ14696 234 aa23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 LLGL1Q15334 1064 aa23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 MEX3CQ5U5Q3 659 aaKnown RBP23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 SEC16BQ96JE7 1060 aa23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 DIS3Q9Y2L1 958 aaKnown RBP23.2■■□□□ 1.3
TSPAN17-207ENST00000508164 TCP10L2B9ZVM9 353 aa23.19■■□□□ 1.3
TSPAN17-207ENST00000508164 KIAA0391O15091 583 aaKnown RBP23.19■■□□□ 1.3
TSPAN17-207ENST00000508164 PMS2P54278 862 aa23.19■■□□□ 1.3
TSPAN17-207ENST00000508164 ACTN3Q08043 901 aaPredicted RBP23.19■■□□□ 1.3
TSPAN17-207ENST00000508164 MKRN4PQ13434 485 aaPredicted RBP23.19■■□□□ 1.3
TSPAN17-207ENST00000508164 BYSLQ13895 437 aaKnown RBP23.19■■□□□ 1.3
TSPAN17-207ENST00000508164 BTBD6Q96KE9 485 aa23.19■■□□□ 1.3
TSPAN17-207ENST00000508164 OSBPL7Q9BZF2 842 aa23.19■■□□□ 1.3
TSPAN17-207ENST00000508164 SLX4Q8IY92 1834 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms