RNA–Protein interactions for RNA: ENST00000504461.5

PDGFRA-204, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 4

Gene PDGFRA, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-204ENST00000504461 ALADP13716 330 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 YWHABP31946 246 aaKnown RBP13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 PPM1AP35813 382 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 PHKA2P46019 1235 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 ERVFC1P60507 584 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 PLCB3Q01970 1234 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 CYP4A11Q02928 519 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 SMAD4Q13485 552 aaKnown RBP13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 CTTNQ14247 550 aaKnown RBP13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 SMAD2Q15796 467 aaKnown RBP13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 XKR9Q5GH70 373 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 BRAPQ7Z569 592 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 ADHFE1Q8IWW8 467 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 ZNF579Q8NAF0 562 aaKnown RBP13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 TCP11Q8WWU5 503 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 PSPC1Q8WXF1 523 aaKnown RBP13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 TNFRSF25Q93038 417 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 TMEM143Q96AN5 459 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 MRPL9Q9BYD2 267 aaKnown RBP13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 ENTPD7Q9NQZ7 604 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 RNF19AQ9NV58 838 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 SPG21Q9NZD8 308 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 WRAP73Q9P2S5 460 aaPredicted RBP13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 NOL7Q9UMY1 257 aaKnown RBP13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 LZTS1Q9Y250 596 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 PCDHGC5Q9Y5F6 944 aa13.85□□□□□ -0.19
PDGFRA-204ENST00000504461 ASAP2O43150 1006 aa13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 GAS2O43903 313 aaKnown RBP13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 SYT1P21579 422 aa13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 TXKP42681 527 aa13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 ALDH7A1P49419 539 aaKnown RBP13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 BMS1Q14692 1282 aaKnown RBP13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 LONRF3Q496Y0 759 aa13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 RILPL1Q5EBL4 403 aa13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 CLLU1OSQ5K130 101 aa13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 PLPP4Q5VZY2 271 aa13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 MCTP1Q6DN14 999 aa13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 TMC7Q7Z402 723 aa13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 ZNF598Q86UK7 904 aaKnown RBP13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 PRPF31Q8WWY3 499 aaKnown RBP13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 CCDC43Q96MW1 224 aaKnown RBP13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 POP1Q99575 1024 aaKnown RBP13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 CDCA3Q99618 268 aaPredicted RBP13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 TCF25Q9BQ70 676 aa13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 LRFN3Q9BTN0 628 aa13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 ZSCAN16Q9H4T2 348 aaPredicted RBP13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 DHX33Q9H6R0 707 aaKnown RBP13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 TTC12Q9H892 705 aaPredicted RBP13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 BMP2KQ9NSY1 1161 aaPredicted RBP13.84□□□□□ -0.19
PDGFRA-204ENST00000504461 STX6O43752 255 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 NEMFO60524 1076 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 GPR37L1O60883 481 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 SLITRK3O94933 977 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 SRGAP2BP0DMP2 458 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 ATP2B1P20020 1258 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 PBX3P40426 434 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 RAB27AP51159 221 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 GUCY1B3Q02153 619 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 ZP2Q05996 745 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 LAMTOR4Q0VGL1 99 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 EMC2Q15006 297 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 DUSP6Q16828 381 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 GLB1LQ6UWU2 654 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 SRGAP1Q7Z6B7 1085 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 RSPH1Q8WYR4 309 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 PGBD4Q96DM1 585 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 MSLNLQ96KJ4 702 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 MTRQ99707 1265 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 EIF2AK1Q9BQI3 630 aaKnown RBP13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 TRAIPQ9BWF2 469 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 IFT122Q9HBG6 1241 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 NGRNQ9NPE2 291 aaKnown RBP13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 FAM105AQ9NUU6 356 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 CLEC1BQ9P126 229 aa13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 BARX2Q9UMQ3 279 aaPredicted RBP13.83□□□□□ -0.2
PDGFRA-204ENST00000504461 FAM86C2PA6NEL3 165 aa13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 C19orf67A6NJJ6 358 aa13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 FSCN2O14926 492 aa13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 ZBTB39O15060 712 aa13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 EYA4O95677 639 aa13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 ATF7P17544 494 aaPredicted RBP13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 CA8P35219 290 aa13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 BCAR1P56945 870 aa13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 RNASELQ05823 741 aaKnown RBP13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 SPIRE1Q08AE8 756 aa13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 NCBP1Q09161 790 aaKnown RBP13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 COASYQ13057 564 aa13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 FERMT3Q86UX7 667 aa13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 RNF149Q8NC42 400 aa13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 LPPQ93052 612 aa13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 AGPAT5Q9NUQ2 364 aa13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 RAPGEFL1Q9UHV5 662 aa13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 INPP5FQ9Y2H2 1132 aa13.82□□□□□ -0.2
PDGFRA-204ENST00000504461 CARNS1A5YM72 827 aa13.81□□□□□ -0.2
PDGFRA-204ENST00000504461 NT5C1B-RDH14C9J2C7 533 aa13.81□□□□□ -0.2
PDGFRA-204ENST00000504461 LAD1O00515 517 aa13.81□□□□□ -0.2
PDGFRA-204ENST00000504461 ZNF623O75123 536 aa13.81□□□□□ -0.2
PDGFRA-204ENST00000504461 ZC3H11AO75152 810 aaKnown RBP eCLIP13.81□□□□□ -0.2
PDGFRA-204ENST00000504461 ERLIN2O94905 339 aa13.81□□□□□ -0.2
PDGFRA-204ENST00000504461 GLP2RO95838 553 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms