RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 LRRIQ4A6NIV6 560 aa21.74■■□□□ 1.07
SCAMP3-209ENST00000497470 PQBP1O60828 265 aaKnown RBP21.74■■□□□ 1.07
SCAMP3-209ENST00000497470 CAVIN2O95810 425 aa21.74■■□□□ 1.07
SCAMP3-209ENST00000497470 PIGRP01833 764 aa21.74■■□□□ 1.07
SCAMP3-209ENST00000497470 VTNP04004 478 aa21.74■■□□□ 1.07
SCAMP3-209ENST00000497470 AXLP30530 894 aa21.74■■□□□ 1.07
SCAMP3-209ENST00000497470 RFC2P35250 354 aa21.74■■□□□ 1.07
SCAMP3-209ENST00000497470 THPOP40225 353 aa21.74■■□□□ 1.07
SCAMP3-209ENST00000497470 SOX10P56693 466 aa21.74■■□□□ 1.07
SCAMP3-209ENST00000497470 CACNB1Q02641 598 aaPredicted RBP21.74■■□□□ 1.07
SCAMP3-209ENST00000497470 STK4Q13043 487 aa21.74■■□□□ 1.07
SCAMP3-209ENST00000497470 TRAF7Q6Q0C0 670 aa21.74■■□□□ 1.07
SCAMP3-209ENST00000497470 CCDC113Q9H0I3 377 aa21.74■■□□□ 1.07
SCAMP3-209ENST00000497470 ZHX3Q9H4I2 956 aa21.74■■□□□ 1.07
SCAMP3-209ENST00000497470 PRMT7Q9NVM4 692 aaPredicted RBP21.74■■□□□ 1.07
SCAMP3-209ENST00000497470 EXOC7Q9UPT5 735 aa21.74■■□□□ 1.07
SCAMP3-209ENST00000497470 A0A087WZ62 844 aa21.73■■□□□ 1.07
SCAMP3-209ENST00000497470 CCDC169A6NNP5 214 aa21.73■■□□□ 1.07
SCAMP3-209ENST00000497470 K7ERI5 159 aa21.73■■□□□ 1.07
SCAMP3-209ENST00000497470 CHRNA1P02708 482 aa21.73■■□□□ 1.07
SCAMP3-209ENST00000497470 NLRP12P59046 1061 aa21.73■■□□□ 1.07
SCAMP3-209ENST00000497470 MAPK6Q16659 721 aa21.73■■□□□ 1.07
SCAMP3-209ENST00000497470 SASS6Q6UVJ0 657 aa21.73■■□□□ 1.07
SCAMP3-209ENST00000497470 ZPBP2Q6X784 338 aa21.73■■□□□ 1.07
SCAMP3-209ENST00000497470 MAP4K3Q8IVH8 894 aa21.73■■□□□ 1.07
SCAMP3-209ENST00000497470 NLRP7Q8WX94 980 aa21.73■■□□□ 1.07
SCAMP3-209ENST00000497470 WNT8BQ93098 351 aa21.73■■□□□ 1.07
SCAMP3-209ENST00000497470 FDXACB1Q9BRP7 624 aaPredicted RBP21.73■■□□□ 1.07
SCAMP3-209ENST00000497470 DACH1Q9UI36 760 aa21.73■■□□□ 1.07
SCAMP3-209ENST00000497470 ATP11BQ9Y2G3 1177 aa21.73■■□□□ 1.07
SCAMP3-209ENST00000497470 CDY2AQ9Y6F7 541 aa21.73■■□□□ 1.07
SCAMP3-209ENST00000497470 ACKR2O00590 384 aa21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 SRGAP2CP0DJJ0 459 aa21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 SFPQP23246 707 aaKnown RBP eCLIP21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 STIM1Q13586 685 aa21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 L1TD1Q5T7N2 865 aaKnown RBP21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 LRRC8DQ7L1W4 858 aa21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 MYOCDQ8IZQ8 938 aa21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 KIAA0895Q8NCT3 520 aa21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 PPP1R13LQ8WUF5 828 aa21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 ZBTB10Q96DT7 871 aa21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 DHTKD1Q96HY7 919 aaPredicted RBP21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 NLRP4Q96MN2 994 aa21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 HIPK3Q9H422 1215 aa21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 CHST12Q9NRB3 414 aa21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 TMEM39AQ9NV64 488 aa21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 ANO10Q9NW15 660 aa21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 TBX20Q9UMR3 447 aa21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 ADGRA3Q8IWK6 1321 aa21.72■■□□□ 1.07
SCAMP3-209ENST00000497470 DENND3A2RUS2 1198 aa21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 CCDC85CA6NKD9 419 aa21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 K7ENM7 598 aa21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 GPR182O15218 404 aa21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 SLC16A4O15374 487 aa21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 MBTD1Q05BQ5 628 aa21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 NCBP1Q09161 790 aaKnown RBP21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 STRN3Q13033 797 aa21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 MYBPC2Q14324 1141 aa21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 HSP90AA2PQ14568 343 aaPredicted RBP21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 KIZQ2M2Z5 673 aa21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 FBXO47Q5MNV8 452 aa21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 ZNF618Q5T7W0 954 aa21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 KSR1Q8IVT5 923 aa21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 ADSSL1Q8N142 457 aa21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 GOLGA5Q8TBA6 731 aa21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 CCDC51Q96ER9 411 aa21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 ACCSQ96QU6 501 aa21.71■■□□□ 1.07
SCAMP3-209ENST00000497470 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.7■■□□□ 1.06
SCAMP3-209ENST00000497470 GCNT3O95395 438 aa21.7■■□□□ 1.06
SCAMP3-209ENST00000497470 TIMP1P01033 207 aa21.7■■□□□ 1.06
SCAMP3-209ENST00000497470 IQCF3P0C7M6 154 aa21.7■■□□□ 1.06
SCAMP3-209ENST00000497470 CCDC192P0DO97 292 aa21.7■■□□□ 1.06
SCAMP3-209ENST00000497470 BMP6P22004 513 aa21.7■■□□□ 1.06
SCAMP3-209ENST00000497470 NFIL3Q16649 462 aa21.7■■□□□ 1.06
SCAMP3-209ENST00000497470 ZSCAN23Q3MJ62 389 aa21.7■■□□□ 1.06
SCAMP3-209ENST00000497470 TSHZ1Q6ZSZ6 1077 aa21.7■■□□□ 1.06
SCAMP3-209ENST00000497470 SCFD1Q8WVM8 642 aa21.7■■□□□ 1.06
SCAMP3-209ENST00000497470 TRAIPQ9BWF2 469 aa21.7■■□□□ 1.06
SCAMP3-209ENST00000497470 SLC39A2Q9NP94 309 aa21.7■■□□□ 1.06
SCAMP3-209ENST00000497470 PDXKO00764 312 aa21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 KIAA0391O15091 583 aaKnown RBP21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 CXCL10P02778 98 aa21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 PFKMP08237 780 aa21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 ERCC5P28715 1186 aaPredicted RBP21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 NMT1P30419 496 aaKnown RBP21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 POU5F1Q01860 360 aaKnown RBP21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 STX1AQ16623 288 aa21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 AMHR2Q16671 573 aa21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 KNOP1Q1ED39 458 aaKnown RBP21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 CENPPQ6IPU0 288 aa21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 TAS1R3Q7RTX0 852 aa21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 C12orf56Q8IXR9 622 aa21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 APBB2Q92870 758 aa21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 SCLT1Q96NL6 688 aa21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 FUCA2Q9BTY2 467 aa21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 MRPL4Q9BYD3 311 aaKnown RBP21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 POLD4Q9HCU8 107 aa21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 TRAF3IP3Q9Y228 551 aa21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 STYXL1Q9Y6J8 313 aa21.69■■□□□ 1.06
SCAMP3-209ENST00000497470 PSMA7O14818 248 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms