RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 TMC3Q7Z5M5 1100 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 FAM186BQ8IYM0 893 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 GPR161Q8N6U8 529 aaKnown RBP3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 EDARADDQ8WWZ3 215 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 FAM46AQ96IP4 442 aaKnown RBP3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 MYD88Q99836 296 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 GDF15Q99988 308 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 BTBD1Q9H0C5 482 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 CSRNP2Q9H175 543 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 SEMA6CQ9H3T2 930 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 FAM204AQ9H8W3 233 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 PIDD1Q9HB75 910 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 ACSS2Q9NR19 701 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 PICK1Q9NRD5 415 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 TOPORSQ9NS56 1045 aaPredicted RBP3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 ATG3Q9NT62 314 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 MKS1Q9NXB0 559 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 MAP3K20Q9NYL2 800 aaKnown RBP3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 KCNH3Q9ULD8 1083 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 ZNF652Q9Y2D9 606 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 DAAM1Q9Y4D1 1078 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 LAS1LQ9Y4W2 734 aaKnown RBP3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 DGKBQ9Y6T7 804 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 X6R8D5 127 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 ITSN1Q15811 1721 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 TOGARAM1Q9Y4F4 1720 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 CEP162Q5TB80 1403 aa3.02□□□□□ -1.93
CKS1BP2-201ENST00000497342 XIRP2A4UGR9 3374 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 SLC12A8A0AV02 714 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 CDC14CA4D256 554 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 F8W735 103 aaPredicted RBP3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 H7C1D1 291 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 SMIM22K7EJ46 135 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 FOXN3O00409 490 aaPredicted RBP3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 TLR5O60602 858 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 CTNND1O60716 968 aaKnown RBP3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 TBC1D8O95759 1140 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 GCP02774 474 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 BCRP11274 1271 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 LCP1P13796 627 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 PLS3P13797 630 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 CD40P25942 277 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 CDC25BP30305 580 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 TRAPPC10P48553 1259 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 TMF1P82094 1093 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 FOXD4Q12950 439 aaPredicted RBP3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 LSAMPQ13449 338 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 SLC9A5Q14940 896 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 ELF2Q15723 593 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 GAB4Q2WGN9 574 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 FIGNQ5HY92 759 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 HYIQ5T013 277 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 ANGEL2Q5VTE6 544 aaKnown RBP3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 RGMBQ6NW40 437 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 XRRA1Q6P2D8 792 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 PGM2L1Q6PCE3 622 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 LVRNQ6Q4G3 990 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 C8orf86Q6ZUL3 223 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 USP45Q70EL2 814 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 GPR155Q7Z3F1 870 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 SLC51AQ86UW1 340 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 RIOX2Q8IUF8 465 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 SLC41A1Q8IVJ1 513 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 DMRTC2Q8IXT2 367 aaPredicted RBP3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 CPXCR1Q8N123 301 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 C2orf69Q8N8R5 385 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 ZNF333Q96JL9 665 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 ZDHHC15Q96MV8 337 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 ASB2Q96Q27 587 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 ELF4Q99607 663 aaPredicted RBP3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 MIPEPQ99797 713 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 ACO2Q99798 780 aaKnown RBP3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 COLEC11Q9BWP8 271 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 GTPBP4Q9BZE4 634 aaKnown RBP3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 WDR12Q9GZL7 423 aaKnown RBP3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 IPPKQ9H8X2 491 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 PDLIM7Q9NR12 457 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 C1GALT1Q9NS00 363 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 RRP7BPQ9NSQ0 103 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 H2AFY2Q9P0M6 372 aaPredicted RBP3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 PDP2Q9P2J9 529 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 RALYQ9UKM9 306 aaKnown RBP3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 FBXL21Q9UKT6 434 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 PADI4Q9UM07 663 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 AP4E1Q9UPM8 1137 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 INVSQ9Y283 1065 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 SPTBN2O15020 2390 aa3.01□□□□□ -1.93
CKS1BP2-201ENST00000497342 ANKRD36BQ8N2N9 1353 aa3□□□□□ -1.93
CKS1BP2-201ENST00000497342 RNF123Q5XPI4 1314 aa3□□□□□ -1.93
CKS1BP2-201ENST00000497342 TCRBV5S4A2TA0A5A2 114 aa3□□□□□ -1.93
CKS1BP2-201ENST00000497342 STXBP3O00186 592 aa3□□□□□ -1.93
CKS1BP2-201ENST00000497342 B3GALT2O43825 422 aa3□□□□□ -1.93
CKS1BP2-201ENST00000497342 FKTNO75072 461 aa3□□□□□ -1.93
CKS1BP2-201ENST00000497342 H2AFYO75367 372 aaKnown RBP3□□□□□ -1.93
CKS1BP2-201ENST00000497342 MAFO75444 373 aaPredicted RBP3□□□□□ -1.93
CKS1BP2-201ENST00000497342 IL33O95760 270 aa3□□□□□ -1.93
CKS1BP2-201ENST00000497342 HSP90AA1P07900 732 aaKnown RBP3□□□□□ -1.93
CKS1BP2-201ENST00000497342 MTHFD2P13995 350 aa3□□□□□ -1.93
CKS1BP2-201ENST00000497342 SNRPBP14678 240 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms