RNA–Protein interactions for RNA: ENST00000496108.5

LYSMD4-209, Transcript of LysM domain containing 4, humanhuman

TSL 2

Gene LYSMD4, Length 2,222 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-209ENST00000496108 RFC4P35249 363 aa22.12■■□□□ 1.13
LYSMD4-209ENST00000496108 SKIV2L2P42285 1042 aaKnown RBP22.12■■□□□ 1.13
LYSMD4-209ENST00000496108 MKRN4PQ13434 485 aaPredicted RBP22.12■■□□□ 1.13
LYSMD4-209ENST00000496108 NFIL3Q16649 462 aa22.12■■□□□ 1.13
LYSMD4-209ENST00000496108 TRMT10CQ7L0Y3 403 aaKnown RBP22.12■■□□□ 1.13
LYSMD4-209ENST00000496108 ASRGL1Q7L266 308 aa22.12■■□□□ 1.13
LYSMD4-209ENST00000496108 ADGRF4Q8IZF3 695 aa22.12■■□□□ 1.13
LYSMD4-209ENST00000496108 DYDC1Q8WWB3 177 aa22.12■■□□□ 1.13
LYSMD4-209ENST00000496108 PSTPIP2Q9H939 334 aa22.12■■□□□ 1.13
LYSMD4-209ENST00000496108 RXFP1Q9HBX9 757 aa22.12■■□□□ 1.13
LYSMD4-209ENST00000496108 SLC24A3Q9HC58 644 aa22.12■■□□□ 1.13
LYSMD4-209ENST00000496108 WNK3Q9BYP7 1800 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 DIAPH2O60879 1101 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 WFS1O76024 890 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 FGFR4P22455 802 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 ICA1Q05084 483 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 ZNF543Q08ER8 600 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 SF3A3Q12874 501 aaKnown RBP eCLIP22.11■■□□□ 1.139e-7■■■■□ 24.7
LYSMD4-209ENST00000496108 DRAP1Q14919 205 aaPredicted RBP22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 CYP1B1Q16678 543 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 C11orf91Q3C1V1 193 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 ZNF568Q3ZCX4 644 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 CDCA2Q69YH5 1023 aaPredicted RBP22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 MOXD1Q6UVY6 613 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 ARMC2Q8NEN0 867 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 THAP2Q9H0W7 228 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 FGFR1OP2Q9NVK5 253 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 DNM3Q9UQ16 869 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 PFASO15067 1338 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 BRWD3Q6RI45 1802 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 CDK5RAP2Q96SN8 1893 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 SMNDC1O75940 238 aaKnown RBP eCLIP22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 KRT16P08779 473 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 ATP5DP30049 168 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 SLCO1A2P46721 670 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 UBAP2Q5T6F2 1119 aaKnown RBP22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 CATSPER3Q86XQ3 398 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 ERMNQ8TAM6 284 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 SPDL1Q96EA4 605 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 SERPINB12Q96P63 405 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 CCDC113Q9H0I3 377 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 GPCPD1Q9NPB8 672 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 DNAJC12Q9UKB3 198 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 COG5Q9UP83 839 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 ALG6Q9Y672 507 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 STK24Q9Y6E0 443 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 ARFGEF1Q9Y6D6 1849 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 MYO3BQ8WXR4 1341 aa22.11■■□□□ 1.13
LYSMD4-209ENST00000496108 TCP11X1B4DZS4 312 aa22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 MSH2P43246 934 aa22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 LACTBP83111 547 aaPredicted RBP22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 MKRN3Q13064 507 aaKnown RBP22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 FAM98CQ17RN3 349 aaKnown RBP22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 NAIF1Q69YI7 327 aaPredicted RBP22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 TTC27Q6P3X3 843 aa22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 SPATA21Q7Z572 469 aa22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 CEP120Q8N960 986 aa22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 GPR88Q9GZN0 384 aa22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 TMOD4Q9NZQ9 345 aa22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 PRKAG3Q9UGI9 489 aa22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 CORO1CQ9ULV4 474 aaPredicted RBP22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 LUC7L3O95232 432 aaKnown RBP22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 TNFAIP3P21580 790 aa22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 RPA1P27694 616 aa22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 SPIRE1Q08AE8 756 aa22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 CCDC137Q6PK04 289 aaKnown RBP22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 LRRC47Q8N1G4 583 aaKnown RBP22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 ZSWIM1Q9BR11 485 aa22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 MKNK1Q9BUB5 465 aa22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 DBR1Q9UK59 544 aaKnown RBP22.1■■□□□ 1.13
LYSMD4-209ENST00000496108 IGKV6D-41A0A0C4DH26 115 aa22.09■■□□□ 1.13
LYSMD4-209ENST00000496108 ZBTB5O15062 677 aa22.09■■□□□ 1.13
LYSMD4-209ENST00000496108 PSMC2P35998 433 aaKnown RBP22.09■■□□□ 1.13
LYSMD4-209ENST00000496108 STAT3P40763 770 aa22.09■■□□□ 1.13
LYSMD4-209ENST00000496108 CCNHP51946 323 aaPredicted RBP22.09■■□□□ 1.13
LYSMD4-209ENST00000496108 MAP2K1Q02750 393 aaPredicted RBP22.09■■□□□ 1.13
LYSMD4-209ENST00000496108 LMNB2Q03252 620 aa22.09■■□□□ 1.13
LYSMD4-209ENST00000496108 FAM186BQ8IYM0 893 aa22.09■■□□□ 1.13
LYSMD4-209ENST00000496108 CKAP2Q8WWK9 683 aa22.09■■□□□ 1.13
LYSMD4-209ENST00000496108 RPS6KC1Q96S38 1066 aa22.09■■□□□ 1.13
LYSMD4-209ENST00000496108 PCDHB13Q9Y5F0 798 aa22.09■■□□□ 1.13
LYSMD4-209ENST00000496108 TMEM120BA0PK00 339 aa22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 CCNB1P14635 433 aa22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 GCKP35557 465 aa22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 FMO5P49326 533 aa22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 ATP11AP98196 1134 aa22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 PABPC4Q13310 644 aaKnown RBP eCLIP22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 KIF22Q14807 665 aa22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 TBC1D9BQ66K14 1250 aa22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 CAPRIN2Q6IMN6 1127 aaKnown RBP22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 BICDL1Q6ZP65 573 aa22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 UHMK1Q8TAS1 419 aaKnown RBP22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 OLFML3Q9NRN5 406 aa22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 COL5A3P25940 1745 aaPredicted RBP22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 ATP2A2P16615 1042 aaKnown RBP22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 PSMC6P62333 389 aa22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 CCDC15Q0P6D6 951 aa22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 BLMHQ13867 455 aa22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 SEL1L2Q5TEA6 688 aa22.08■■□□□ 1.13
LYSMD4-209ENST00000496108 VSTM1Q6UX27 236 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms