RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 TPRP12270 2363 aaKnown RBP15.17■□□□□ 0.02
COL1A1-209ENST00000495677 IGKV6-21A0A0C4DH24 114 aa15.17■□□□□ 0.02
COL1A1-209ENST00000495677 ESYT2A0FGR8 921 aa15.17■□□□□ 0.02
COL1A1-209ENST00000495677 WDR64B1ANS9 1081 aa15.17■□□□□ 0.02
COL1A1-209ENST00000495677 NARSO43776 548 aaKnown RBP15.17■□□□□ 0.02
COL1A1-209ENST00000495677 OATP04181 439 aa15.17■□□□□ 0.02
COL1A1-209ENST00000495677 ALDH2P05091 517 aa15.17■□□□□ 0.02
COL1A1-209ENST00000495677 SRFP11831 508 aa15.17■□□□□ 0.02
COL1A1-209ENST00000495677 FGFR4P22455 802 aa15.17■□□□□ 0.02
COL1A1-209ENST00000495677 RAB27AP51159 221 aa15.17■□□□□ 0.02
COL1A1-209ENST00000495677 RAB11FIP4Q86YS3 637 aa15.17■□□□□ 0.02
COL1A1-209ENST00000495677 HDAC7Q8WUI4 952 aa15.17■□□□□ 0.02
COL1A1-209ENST00000495677 NLRP7Q8WX94 980 aa15.17■□□□□ 0.02
COL1A1-209ENST00000495677 RUBCNQ92622 972 aa15.17■□□□□ 0.02
COL1A1-209ENST00000495677 STAMQ92783 540 aa15.17■□□□□ 0.02
COL1A1-209ENST00000495677 ZMYND12Q9H0C1 365 aa15.17■□□□□ 0.02
COL1A1-209ENST00000495677 FAM105AQ9NUU6 356 aa15.17■□□□□ 0.02
COL1A1-209ENST00000495677 SSX2IPQ9Y2D8 614 aa15.17■□□□□ 0.02
COL1A1-209ENST00000495677 STK25O00506 426 aa15.16■□□□□ 0.02
COL1A1-209ENST00000495677 SLC27A2O14975 620 aa15.16■□□□□ 0.02
COL1A1-209ENST00000495677 CFHP08603 1231 aa15.16■□□□□ 0.02
COL1A1-209ENST00000495677 SP9P0CG40 484 aa15.16■□□□□ 0.02
COL1A1-209ENST00000495677 SLC11A1P49279 550 aa15.16■□□□□ 0.02
COL1A1-209ENST00000495677 RNASELQ05823 741 aaKnown RBP15.16■□□□□ 0.02
COL1A1-209ENST00000495677 JAKMIP3Q5VZ66 844 aa15.16■□□□□ 0.02
COL1A1-209ENST00000495677 TWF2Q6IBS0 349 aaKnown RBP15.16■□□□□ 0.02
COL1A1-209ENST00000495677 ZNF410Q86VK4 478 aa15.16■□□□□ 0.02
COL1A1-209ENST00000495677 C1orf210Q8IVY1 113 aa15.16■□□□□ 0.02
COL1A1-209ENST00000495677 ZNF668Q96K58 619 aaPredicted RBP15.16■□□□□ 0.02
COL1A1-209ENST00000495677 CEP89Q96ST8 783 aa15.16■□□□□ 0.02
COL1A1-209ENST00000495677 TMEM175Q9BSA9 504 aa15.16■□□□□ 0.02
COL1A1-209ENST00000495677 NIFKQ9BYG3 293 aaKnown RBP15.16■□□□□ 0.02
COL1A1-209ENST00000495677 DISC1Q9NRI5 854 aa15.16■□□□□ 0.02
COL1A1-209ENST00000495677 MRPL17Q9NRX2 175 aaKnown RBP15.16■□□□□ 0.02
COL1A1-209ENST00000495677 KANSL3Q9P2N6 904 aa15.16■□□□□ 0.02
COL1A1-209ENST00000495677 DNAJB4Q9UDY4 337 aa15.16■□□□□ 0.02
COL1A1-209ENST00000495677 SIT1Q9Y3P8 196 aa15.16■□□□□ 0.02
COL1A1-209ENST00000495677 SAMM50Q9Y512 469 aa15.16■□□□□ 0.02
COL1A1-209ENST00000495677 R4GN57 208 aa15.16■□□□□ 0.02
COL1A1-209ENST00000495677 KMT2BQ9UMN6 2715 aaPredicted RBP15.16■□□□□ 0.02
COL1A1-209ENST00000495677 CCDC195A0A1B0GUA6 201 aa15.15■□□□□ 0.02
COL1A1-209ENST00000495677 SPDYE4A6NLX3 237 aa15.15■□□□□ 0.02
COL1A1-209ENST00000495677 CSDE1O75534 798 aaKnown RBP15.15■□□□□ 0.02
COL1A1-209ENST00000495677 SFPQP23246 707 aaKnown RBP eCLIP15.15■□□□□ 0.02
COL1A1-209ENST00000495677 SFNP31947 248 aa15.15■□□□□ 0.02
COL1A1-209ENST00000495677 RTN1Q16799 776 aa15.15■□□□□ 0.02
COL1A1-209ENST00000495677 ELMSAN1Q6PJG2 1045 aa15.15■□□□□ 0.02
COL1A1-209ENST00000495677 MRPL10Q7Z7H8 261 aaKnown RBP15.15■□□□□ 0.02
COL1A1-209ENST00000495677 ZNF280BQ86YH2 543 aa15.15■□□□□ 0.02
COL1A1-209ENST00000495677 SUMF1Q8NBK3 374 aa15.15■□□□□ 0.02
COL1A1-209ENST00000495677 EXOC6Q8TAG9 804 aa15.15■□□□□ 0.02
COL1A1-209ENST00000495677 LPPQ93052 612 aa15.15■□□□□ 0.02
COL1A1-209ENST00000495677 LENG9Q96B70 501 aa15.15■□□□□ 0.02
COL1A1-209ENST00000495677 PGBD4Q96DM1 585 aa15.15■□□□□ 0.02
COL1A1-209ENST00000495677 SCLT1Q96NL6 688 aa15.15■□□□□ 0.02
COL1A1-209ENST00000495677 LRRC2Q9BYS8 371 aa15.15■□□□□ 0.02
COL1A1-209ENST00000495677 LSG1Q9H089 658 aaKnown RBP15.15■□□□□ 0.02
COL1A1-209ENST00000495677 TBC1D17Q9HA65 648 aa15.15■□□□□ 0.02
COL1A1-209ENST00000495677 SLC2A4RGQ9NR83 387 aa15.15■□□□□ 0.02
COL1A1-209ENST00000495677 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.15■□□□□ 0.02
COL1A1-209ENST00000495677 A0A087WZ62 844 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 MEIS3P2A8K0S8 358 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 DDHD2O94830 711 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 EFEMP2O95967 443 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 SOD2P04179 222 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 SDHBP21912 280 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 RCAN1P53805 252 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 PRKCEQ02156 737 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 DRP2Q13474 957 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 PFKFB3Q16875 520 aaPredicted RBP15.14■□□□□ 0.01
COL1A1-209ENST00000495677 CREB3L3Q68CJ9 461 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 AGMOQ6ZNB7 445 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 RNF168Q8IYW5 571 aaPredicted RBP15.14■□□□□ 0.01
COL1A1-209ENST00000495677 RDM1Q8NG50 284 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 RSAD2Q8WXG1 361 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 RPS6KC1Q96S38 1066 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 RIT2Q99578 217 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 FDXACB1Q9BRP7 624 aaPredicted RBP15.14■□□□□ 0.01
COL1A1-209ENST00000495677 RXFP1Q9HBX9 757 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 MAN1C1Q9NR34 630 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 FAM217BQ9NTX9 383 aaPredicted RBP15.14■□□□□ 0.01
COL1A1-209ENST00000495677 FAN1Q9Y2M0 1017 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 CLUHO75153 1309 aa15.14■□□□□ 0.01
COL1A1-209ENST00000495677 ANHXE9PGG2 379 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 NRP1O14786 923 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 ZBTB43O43298 467 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 B4GALT3O60512 393 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 ADH1AP07327 375 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 LAMP2P13473 410 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 GBP2P32456 591 aaPredicted RBP15.13■□□□□ 0.01
COL1A1-209ENST00000495677 DNM2P50570 870 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 JAK3P52333 1124 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 STARD6P59095 220 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 EXOSC10Q01780 885 aaKnown RBP15.13■□□□□ 0.01
COL1A1-209ENST00000495677 ZNF528Q3MIS6 628 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 PRR16Q569H4 304 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 GPR65Q8IYL9 337 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 GPR161Q8N6U8 529 aaKnown RBP15.13■□□□□ 0.01
COL1A1-209ENST00000495677 URGCPQ8TCY9 931 aa15.13■□□□□ 0.01
COL1A1-209ENST00000495677 RIN2Q8WYP3 895 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms