RNA–Protein interactions for RNA: ENST00000492506.1

HDAC3-213, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 830 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-213ENST00000492506 VN1R3Q9BXE9 311 aa14.79□□□□□ -0.04
HDAC3-213ENST00000492506 MRPL9Q9BYD2 267 aaKnown RBP14.79□□□□□ -0.04
HDAC3-213ENST00000492506 FAM217BQ9NTX9 383 aaPredicted RBP14.79□□□□□ -0.04
HDAC3-213ENST00000492506 CCDC39Q9UFE4 941 aa14.79□□□□□ -0.04
HDAC3-213ENST00000492506 PCDHA10Q9Y5I2 948 aa14.79□□□□□ -0.04
HDAC3-213ENST00000492506 OTOGLQ3ZCN5 2332 aa14.78□□□□□ -0.04
HDAC3-213ENST00000492506 MTCL1Q9Y4B5 1905 aaKnown RBP14.78□□□□□ -0.04
HDAC3-213ENST00000492506 hCG_1984214I3L0E3 225 aa14.78□□□□□ -0.04
HDAC3-213ENST00000492506 PSAPP07602 524 aa14.78□□□□□ -0.04
HDAC3-213ENST00000492506 TDGQ13569 410 aa14.78□□□□□ -0.04
HDAC3-213ENST00000492506 ANGPT1Q15389 498 aa14.78□□□□□ -0.04
HDAC3-213ENST00000492506 CREB3L3Q68CJ9 461 aa14.78□□□□□ -0.04
HDAC3-213ENST00000492506 GPR149Q86SP6 731 aa14.78□□□□□ -0.04
HDAC3-213ENST00000492506 ZNF713Q8N859 430 aaPredicted RBP14.78□□□□□ -0.04
HDAC3-213ENST00000492506 IGSF21Q96ID5 467 aa14.78□□□□□ -0.04
HDAC3-213ENST00000492506 TRAIPQ9BWF2 469 aa14.78□□□□□ -0.04
HDAC3-213ENST00000492506 GLT8D2Q9H1C3 349 aa14.78□□□□□ -0.04
HDAC3-213ENST00000492506 RBM28Q9NW13 759 aaKnown RBP14.78□□□□□ -0.04
HDAC3-213ENST00000492506 NAP1L2Q9ULW6 460 aaPredicted RBP14.78□□□□□ -0.04
HDAC3-213ENST00000492506 DUSP12Q9UNI6 340 aa14.78□□□□□ -0.04
HDAC3-213ENST00000492506 R3HCC1Q9Y3T6 440 aaKnown RBP14.78□□□□□ -0.04
HDAC3-213ENST00000492506 CEP250Q9BV73 2442 aa14.78□□□□□ -0.04
HDAC3-213ENST00000492506 CSDE1O75534 798 aaKnown RBP14.77□□□□□ -0.05
HDAC3-213ENST00000492506 GALTP07902 379 aa14.77□□□□□ -0.05
HDAC3-213ENST00000492506 TMOD1P28289 359 aa14.77□□□□□ -0.05
HDAC3-213ENST00000492506 CA8P35219 290 aa14.77□□□□□ -0.05
HDAC3-213ENST00000492506 DDIT3P35638 169 aa14.77□□□□□ -0.05
HDAC3-213ENST00000492506 PHKA2P46019 1235 aa14.77□□□□□ -0.05
HDAC3-213ENST00000492506 DRP2Q13474 957 aa14.77□□□□□ -0.05
HDAC3-213ENST00000492506 GIT2Q14161 759 aa14.77□□□□□ -0.05
HDAC3-213ENST00000492506 BMS1Q14692 1282 aaKnown RBP14.77□□□□□ -0.05
HDAC3-213ENST00000492506 DTWD2Q8NBA8 298 aa14.77□□□□□ -0.05
HDAC3-213ENST00000492506 LENG9Q96B70 501 aa14.77□□□□□ -0.05
HDAC3-213ENST00000492506 FAM167AQ96KS9 214 aa14.77□□□□□ -0.05
HDAC3-213ENST00000492506 NRDE2Q9H7Z3 1164 aa14.77□□□□□ -0.05
HDAC3-213ENST00000492506 KCNK12Q9HB15 430 aa14.77□□□□□ -0.05
HDAC3-213ENST00000492506 TBC1D13Q9NVG8 400 aa14.77□□□□□ -0.05
HDAC3-213ENST00000492506 DACT1Q9NYF0 836 aa14.77□□□□□ -0.05
HDAC3-213ENST00000492506 ZKSCAN5Q9Y2L8 839 aa14.77□□□□□ -0.05
HDAC3-213ENST00000492506 MEIS3P2A8K0S8 358 aa14.76□□□□□ -0.05
HDAC3-213ENST00000492506 EDIL3O43854 480 aa14.76□□□□□ -0.05
HDAC3-213ENST00000492506 B4GALT3O60512 393 aa14.76□□□□□ -0.05
HDAC3-213ENST00000492506 ZC3H11AO75152 810 aaKnown RBP eCLIP14.76□□□□□ -0.05
HDAC3-213ENST00000492506 OATP04181 439 aa14.76□□□□□ -0.05
HDAC3-213ENST00000492506 SETQ01105 290 aaPredicted RBP14.76□□□□□ -0.05
HDAC3-213ENST00000492506 TARBP2Q15633 366 aaKnown RBP14.76□□□□□ -0.05
HDAC3-213ENST00000492506 PTPN14Q15678 1187 aa14.76□□□□□ -0.05
HDAC3-213ENST00000492506 UGCGQ16739 394 aa14.76□□□□□ -0.05
HDAC3-213ENST00000492506 RTN1Q16799 776 aa14.76□□□□□ -0.05
HDAC3-213ENST00000492506 KLHL40Q2TBA0 621 aa14.76□□□□□ -0.05
HDAC3-213ENST00000492506 CABP7Q86V35 215 aa14.76□□□□□ -0.05
HDAC3-213ENST00000492506 LPPQ93052 612 aa14.76□□□□□ -0.05
HDAC3-213ENST00000492506 ACSF2Q96CM8 615 aaPredicted RBP14.76□□□□□ -0.05
HDAC3-213ENST00000492506 PDLIM2Q96JY6 352 aa14.76□□□□□ -0.05
HDAC3-213ENST00000492506 RTP3Q9BQQ7 232 aa14.76□□□□□ -0.05
HDAC3-213ENST00000492506 SFXN1Q9H9B4 322 aa14.76□□□□□ -0.05
HDAC3-213ENST00000492506 CHST12Q9NRB3 414 aa14.76□□□□□ -0.05
HDAC3-213ENST00000492506 DNAJB4Q9UDY4 337 aa14.76□□□□□ -0.05
HDAC3-213ENST00000492506 CACNA1IQ9P0X4 2223 aa14.76□□□□□ -0.05
HDAC3-213ENST00000492506 ZBTB43O43298 467 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 NARSO43776 548 aaKnown RBP14.75□□□□□ -0.05
HDAC3-213ENST00000492506 LILRB3O75022 631 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 N4BP1O75113 896 aaKnown RBP14.75□□□□□ -0.05
HDAC3-213ENST00000492506 CDC27P30260 824 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 CIITAP33076 1130 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 CLCN4P51793 760 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 FAM193AP78312 1265 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 EXOSC10Q01780 885 aaKnown RBP14.75□□□□□ -0.05
HDAC3-213ENST00000492506 PRKCEQ02156 737 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 SLC20A2Q08357 652 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 PRR16Q569H4 304 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 SYNE3Q6ZMZ3 975 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 CCDC149Q6ZUS6 474 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 OTOP3Q7RTS5 596 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 SIX5Q8N196 739 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 RSPH1Q8WYR4 309 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 KLHL5Q96PQ7 755 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 CEP89Q96ST8 783 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 ZMYND12Q9H0C1 365 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 NCOR2Q9Y618 2525 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 DOCK6Q96HP0 2047 aa14.75□□□□□ -0.05
HDAC3-213ENST00000492506 ESYT2A0FGR8 921 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 WDR64B1ANS9 1081 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 STBD1O95210 358 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 SLC11A1P49279 550 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 PFKFB3Q16875 520 aaPredicted RBP14.74□□□□□ -0.05
HDAC3-213ENST00000492506 LETM2Q2VYF4 491 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 LONRF3Q496Y0 759 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 C15orf39Q6ZRI6 1047 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 PPFIBP1Q86W92 1011 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 ZNF280BQ86YH2 543 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 NLRP7Q8WX94 980 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 RMDN1Q96DB5 314 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 TCEANC2Q96MN5 208 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 ESYT1Q9BSJ8 1104 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 C22orf23Q9BZE7 217 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 DISC1Q9NRI5 854 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 NRBP2Q9NSY0 501 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 SAMM50Q9Y512 469 aa14.74□□□□□ -0.05
HDAC3-213ENST00000492506 IGKV6-21A0A0C4DH24 114 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms