RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 PRPF6O94906 941 aaKnown RBP11.24□□□□□ -0.61
HDAC3-210ENST00000490808 IPO7O95373 1038 aaKnown RBP11.24□□□□□ -0.61
HDAC3-210ENST00000490808 CCNE2O96020 404 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 MYBP10242 640 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 KRT9P35527 623 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 PSMC2P35998 433 aaKnown RBP11.24□□□□□ -0.61
HDAC3-210ENST00000490808 RFC5P40937 340 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 ADCYAP1R1P41586 468 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 TERF1P54274 439 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 RTP1P59025 263 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 ZBED6P86452 979 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 DMP1Q13316 513 aaPredicted RBP11.24□□□□□ -0.61
HDAC3-210ENST00000490808 PPP2R5AQ15172 486 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 PRAMEF19Q5SWL8 479 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 METTL7BQ6UX53 244 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 LRRC55Q6ZSA7 311 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 CYFIP1Q7L576 1253 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 CCAR2Q8N163 923 aaKnown RBP11.24□□□□□ -0.61
HDAC3-210ENST00000490808 TXLNBQ8N3L3 684 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 KLHDC9Q8NEP7 349 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 NEK11Q8NG66 645 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 ATP6V0A4Q9HBG4 840 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 DDX41Q9UJV9 622 aaKnown RBP11.24□□□□□ -0.61
HDAC3-210ENST00000490808 DAAM1Q9Y4D1 1078 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 PAXBP1Q9Y5B6 917 aa11.24□□□□□ -0.61
HDAC3-210ENST00000490808 SFI1A8K8P3 1242 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 RSPH10B2B2RC85 870 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 PPFIA4O75335 1185 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 RGS20O76081 388 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 NR3C1P04150 777 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 CCDC175P0C221 793 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 RSPH10BP0C881 870 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 KRT13P13646 458 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 SMPD1P17405 629 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 NMT1P30419 496 aaKnown RBP11.23□□□□□ -0.61
HDAC3-210ENST00000490808 CYLC1P35663 651 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-210ENST00000490808 SLC26A2P50443 739 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 PRKCEQ02156 737 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 CETN1Q12798 172 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 ARID5BQ14865 1188 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 FSCN1Q16658 493 aaKnown RBP11.23□□□□□ -0.61
HDAC3-210ENST00000490808 FAM102BQ5T8I3 360 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 EEPD1Q7L9B9 569 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 CACNA2D4Q7Z3S7 1137 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 UBE2Q1Q7Z7E8 422 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 USP37Q86T82 979 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 SLC9A9Q8IVB4 645 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 DHX37Q8IY37 1157 aaKnown RBP11.23□□□□□ -0.61
HDAC3-210ENST00000490808 OR6J1Q8NGC5 347 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 PPTC7Q8NI37 304 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 TMEM174Q8WUU8 243 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 SPIRE2Q8WWL2 714 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 PRIMPOLQ96LW4 560 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 GLT1D1Q96MS3 346 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 KATNAL1Q9BW62 490 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 ABHD10Q9NUJ1 306 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 WRAP73Q9P2S5 460 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-210ENST00000490808 SEPT9Q9UHD8 586 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-210ENST00000490808 PHF24Q9UPV7 400 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 MAFBQ9Y5Q3 323 aaPredicted RBP11.23□□□□□ -0.61
HDAC3-210ENST00000490808 MROH7Q68CQ1 1323 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 PHLPP2Q6ZVD8 1323 aa11.23□□□□□ -0.61
HDAC3-210ENST00000490808 CCDC169A6NNP5 214 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 ZBTB39O15060 712 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 N4BP1O75113 896 aaKnown RBP11.22□□□□□ -0.61
HDAC3-210ENST00000490808 AFPP02771 609 aaKnown RBP11.22□□□□□ -0.61
HDAC3-210ENST00000490808 OATP04181 439 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 GYPCP04921 128 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 C6orf222P0C671 652 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-210ENST00000490808 COL6A1P12109 1028 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 HOXD8P13378 290 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-210ENST00000490808 STAT5BP51692 787 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 POLGP54098 1239 aaPredicted RBP11.22□□□□□ -0.61
HDAC3-210ENST00000490808 GTF2BQ00403 316 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 SYCP1Q15431 976 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 DGKDQ16760 1214 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 GNASQ5JWF2 1037 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 MIIPQ5JXC2 388 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 CELF3Q5SZQ8 465 aaKnown RBP11.22□□□□□ -0.61
HDAC3-210ENST00000490808 UTP14CQ5TAP6 766 aaKnown RBP11.22□□□□□ -0.61
HDAC3-210ENST00000490808 CEP135Q66GS9 1140 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 HAUS6Q7Z4H7 955 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 TRIM59Q8IWR1 403 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 C12orf56Q8IXR9 622 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 AFAP1L1Q8TED9 768 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 SLC7A3Q8WY07 619 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 NTPCRQ9BSD7 190 aaKnown RBP11.22□□□□□ -0.61
HDAC3-210ENST00000490808 NIFKQ9BYG3 293 aaKnown RBP11.22□□□□□ -0.61
HDAC3-210ENST00000490808 C11orf49Q9H6J7 331 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 MMRN2Q9H8L6 949 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 KMT5AQ9NQR1 393 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 CYP26B1Q9NR63 512 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 PDGFCQ9NRA1 345 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 IGSF9BQ9UPX0 1349 aa11.22□□□□□ -0.61
HDAC3-210ENST00000490808 IGKV6D-21A0A0A0MT36 114 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 GTPBP10A4D1E9 387 aaKnown RBP11.21□□□□□ -0.61
HDAC3-210ENST00000490808 KIAA0391O15091 583 aaKnown RBP11.21□□□□□ -0.61
HDAC3-210ENST00000490808 MAPK13O15264 365 aa11.21□□□□□ -0.61
HDAC3-210ENST00000490808 DYNC1LI2O43237 492 aaPredicted RBP11.21□□□□□ -0.61
HDAC3-210ENST00000490808 EVI5O60447 810 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms