RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 NT5DC1Q5TFE4 455 aa17.76■□□□□ 0.43
CLIC4-203ENST00000489758 DEPTORQ8TB45 409 aa17.76■□□□□ 0.43
CLIC4-203ENST00000489758 SCLT1Q96NL6 688 aa17.76■□□□□ 0.43
CLIC4-203ENST00000489758 STRA6Q9BX79 667 aa17.76■□□□□ 0.43
CLIC4-203ENST00000489758 GCOM2Q9BZD3 368 aaPredicted RBP17.76■□□□□ 0.43
CLIC4-203ENST00000489758 CCDC113Q9H0I3 377 aa17.76■□□□□ 0.43
CLIC4-203ENST00000489758 NUP62CLQ9H1M0 184 aa17.76■□□□□ 0.43
CLIC4-203ENST00000489758 AGO3Q9H9G7 860 aaKnown RBP17.76■□□□□ 0.43
CLIC4-203ENST00000489758 NOC2LQ9Y3T9 749 aaKnown RBP17.76■□□□□ 0.43
CLIC4-203ENST00000489758 SQORQ9Y6N5 450 aa17.76■□□□□ 0.43
CLIC4-203ENST00000489758 CSDE1O75534 798 aaKnown RBP17.75■□□□□ 0.43
CLIC4-203ENST00000489758 RHOBTB3O94955 611 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 CXCL10P02778 98 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 GHRP10912 638 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 SYN1P17600 705 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 NMT1P30419 496 aaKnown RBP17.75■□□□□ 0.43
CLIC4-203ENST00000489758 CASP5P51878 434 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 KCNB1Q14721 858 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 MFSD5Q6N075 450 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 TSHZ1Q6ZSZ6 1077 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 TAS1R3Q7RTX0 852 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 ZNF720Q7Z2F6 126 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 SRGAP1Q7Z6B7 1085 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 FAM178BQ8IXR5 827 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 GLIS3Q8NEA6 775 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 C2orf40Q9H1Z8 148 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 ST6GALNAC4Q9H4F1 302 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 TBC1D7Q9P0N9 293 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 KCNG1Q9UIX4 513 aa17.75■□□□□ 0.43
CLIC4-203ENST00000489758 ZMYND8Q9ULU4 1186 aaPredicted RBP17.75■□□□□ 0.43
CLIC4-203ENST00000489758 PPP1R37O75864 691 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 SMC2O95347 1197 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 PARNO95453 639 aaKnown RBP17.74■□□□□ 0.43
CLIC4-203ENST00000489758 FGFR4P22455 802 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 EFNA5P52803 228 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 SMTNP53814 917 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 AMHR2Q16671 573 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 FAM26FQ5R3K3 315 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 HAUS6Q7Z4H7 955 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 FAM228AQ86W67 206 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 USP38Q8NB14 1042 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 SMARCE1Q969G3 411 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 GSDMAQ96QA5 445 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 FZD8Q9H461 694 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 TMEM134Q9H6X4 195 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 ERVK-5Q9HDB9 667 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 EXOC1Q9NV70 894 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 TMEM63CQ9P1W3 806 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 PRKAG2Q9UGJ0 569 aa17.74■□□□□ 0.43
CLIC4-203ENST00000489758 DENND3A2RUS2 1198 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 K7ENM7 598 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 EDN1P05305 212 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 MYBP10242 640 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 CSF2RAP15509 400 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 RFC2P35250 354 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 GTF2BQ00403 316 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 STK4Q13043 487 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 FAM187BQ17R55 369 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 ZC2HC1CQ53FD0 456 aaPredicted RBP17.73■□□□□ 0.43
CLIC4-203ENST00000489758 PLEKHG4Q58EX7 1191 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 PPP4R3CPQ6ZMV5 832 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 RBM43Q6ZSC3 357 aaKnown RBP17.73■□□□□ 0.43
CLIC4-203ENST00000489758 EPM2AIP1Q7L775 607 aaPredicted RBP17.73■□□□□ 0.43
CLIC4-203ENST00000489758 ZBTB8OSQ8IWT0 167 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 KIAA0895Q8NCT3 520 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 BADQ92934 168 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 MRPL44Q9H9J2 332 aaKnown RBP17.73■□□□□ 0.43
CLIC4-203ENST00000489758 KIAA1468Q9P260 1216 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 MAN1B1Q9UKM7 699 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 ST3GAL5Q9UNP4 418 aa17.73■□□□□ 0.43
CLIC4-203ENST00000489758 PHLPP2Q6ZVD8 1323 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 TRIP12Q14669 1992 aaPredicted RBP17.72■□□□□ 0.43
CLIC4-203ENST00000489758 H0YCG3 227 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 H0YGN5 161 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 INO80B-WBP1J3KQ70 363 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 RPS6KA5O75582 802 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 SCP2P22307 547 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 CD52P31358 61 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 PSMD2Q13200 908 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 TCTN1Q2MV58 587 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 CCDC183Q5T5S1 534 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 TMEM199Q8N511 208 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 SLC17A8Q8NDX2 589 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 INO80BQ9C086 356 aaPredicted RBP17.72■□□□□ 0.43
CLIC4-203ENST00000489758 SLC39A2Q9NP94 309 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 RMND1Q9NWS8 449 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 PADI3Q9ULW8 664 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 TBX20Q9UMR3 447 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 COLQQ9Y215 455 aaPredicted RBP17.72■□□□□ 0.43
CLIC4-203ENST00000489758 NR2E3Q9Y5X4 410 aa17.72■□□□□ 0.43
CLIC4-203ENST00000489758 TTLL13PA6NNM8 815 aa17.71■□□□□ 0.43
CLIC4-203ENST00000489758 K7ERI5 159 aa17.71■□□□□ 0.43
CLIC4-203ENST00000489758 B4GALT5O43286 388 aa17.71■□□□□ 0.43
CLIC4-203ENST00000489758 TSPAN1O60635 241 aa17.71■□□□□ 0.43
CLIC4-203ENST00000489758 GCNT3O95395 438 aa17.71■□□□□ 0.43
CLIC4-203ENST00000489758 PRKCBP05771 671 aa17.71■□□□□ 0.43
CLIC4-203ENST00000489758 BMP6P22004 513 aa17.71■□□□□ 0.43
CLIC4-203ENST00000489758 SFPQP23246 707 aaKnown RBP eCLIP17.71■□□□□ 0.43
CLIC4-203ENST00000489758 HOXA11P31270 313 aaPredicted RBP17.71■□□□□ 0.43
CLIC4-203ENST00000489758 HOXD13P35453 343 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms